Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:29 (9399): wrapper (7.7.26015): starting
21:38:29 (9399): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 21:38:29] Arguments: --nthreads 8
[2026-01-10 21:38:29] Threads: 8
[2026-01-10 21:38:29] Checking for CVMFS
[2026-01-10 21:38:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 21:38:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 21:38:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 21:38:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 21:38:33] 2.11.2.0 27806 37328 126832 154991 1 86 15352092 25165824 899 130560 0 18745167 99.820 11177621 3809 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 21:38:33] CVMFS is ok
[2026-01-10 21:38:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 21:38:33] Checking for apptainer binary...
[2026-01-10 21:38:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 21:38:33] Running /usr/bin/apptainer --version
[2026-01-10 21:38:34] apptainer version 1.3.2-1.el7
[2026-01-10 21:38:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 21:38:52] cg-vwn467.simple-grid.lan
[2026-01-10 21:38:52] apptainer works
[2026-01-10 21:38:52] Set ATHENA_PROC_NUMBER=8
[2026-01-10 21:38:52] Set ATHENA_CORE_NUMBER=8
[2026-01-10 21:38:52] Starting ATLAS job with PandaID=6963187313
[2026-01-10 21:38:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:27:20]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:27:21] 2026-01-11 01:26:28,339 | INFO     | time since job start (16967s) is within the limit (349056.0s)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,327 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 02:27:21] 2026-01-11 01:26:29,328 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,330 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963187313/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,331 | INFO     | extracted standard info from prmon json
[2026-01-11 02:27:21] 2026-01-11 01:26:29,331 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 02:27:21] 2026-01-11 01:26:29,331 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 02:27:21] 2026-01-11 01:26:29,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 02:27:21] 2026-01-11 01:26:29,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 02:27:21] 2026-01-11 01:26:29,340 | INFO     | fitting pss+swap vs Time
[2026-01-11 02:27:21] 2026-01-11 01:26:29,341 | INFO     | sum of square deviations: 5968658887.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,343 | INFO     | sum of deviations: 119553048226.49998
[2026-01-11 02:27:21] 2026-01-11 01:26:29,343 | INFO     | mean x: 1768086511.5
[2026-01-11 02:27:21] 2026-01-11 01:26:29,343 | INFO     | mean y: 2418165.7723880596
[2026-01-11 02:27:21] 2026-01-11 01:26:29,343 | INFO     | intersect: -35412594817.86097
[2026-01-11 02:27:21] 2026-01-11 01:26:29,344 | INFO     | chi2: 8.604634269069349
[2026-01-11 02:27:21] 2026-01-11 01:26:29,344 | INFO     | sum of square deviations: 5640782972.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,346 | INFO     | sum of deviations: 153227559261.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,346 | INFO     | mean x: 1768086359.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,346 | INFO     | mean y: 2433638.524714829
[2026-01-11 02:27:21] 2026-01-11 01:26:29,347 | INFO     | intersect: -48026281292.902756
[2026-01-11 02:27:21] 2026-01-11 01:26:29,347 | INFO     | chi2: 7.0790639158614646
[2026-01-11 02:27:21] 2026-01-11 01:26:29,347 | INFO     | current chi2=7.0790639158614646 (change=17.72963621117258 %)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,347 | INFO     | right removable region: 262
[2026-01-11 02:27:21] 2026-01-11 01:26:29,348 | INFO     | sum of square deviations: 5640782972.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,350 | INFO     | sum of deviations: 27282689687.99999
[2026-01-11 02:27:21] 2026-01-11 01:26:29,350 | INFO     | mean x: 1768086664.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,350 | INFO     | mean y: 2461054.733840304
[2026-01-11 02:27:21] 2026-01-11 01:26:29,350 | INFO     | intersect: -8549216972.031253
[2026-01-11 02:27:21] 2026-01-11 01:26:29,350 | INFO     | chi2: 3.7880999758902636
[2026-01-11 02:27:21] 2026-01-11 01:26:29,351 | INFO     | current chi2=3.7880999758902636 (change=55.97604898203335 %)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,351 | INFO     | sum of square deviations: 5325139844.5
[2026-01-11 02:27:21] 2026-01-11 01:26:29,361 | INFO     | sum of deviations: -31595568174.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,361 | INFO     | mean x: 1768086816.5
[2026-01-11 02:27:21] 2026-01-11 01:26:29,362 | INFO     | mean y: 2489411.3178294576
[2026-01-11 02:27:21] 2026-01-11 01:26:29,362 | INFO     | intersect: 10493051007.737587
[2026-01-11 02:27:21] 2026-01-11 01:26:29,362 | INFO     | chi2: 1.777611754421114
[2026-01-11 02:27:21] 2026-01-11 01:26:29,362 | INFO     | current chi2=1.777611754421114 (change=53.07378987526993 %)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,363 | INFO     | sum of square deviations: 5021496942.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,365 | INFO     | sum of deviations: -36561740678.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,365 | INFO     | mean x: 1768086969.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,365 | INFO     | mean y: 2491869.581027668
[2026-01-11 02:27:21] 2026-01-11 01:26:29,365 | INFO     | intersect: 12876011061.844439
[2026-01-11 02:27:21] 2026-01-11 01:26:29,365 | INFO     | chi2: 1.7386050551988408
[2026-01-11 02:27:21] 2026-01-11 01:26:29,366 | INFO     | current chi2=1.7386050551988408 (change=2.194331755809973 %)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,366 | INFO     | left removable region: 30
[2026-01-11 02:27:21] 2026-01-11 01:26:29,366 | INFO     | sum of square deviations: 3871990738.0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,368 | INFO     | sum of deviations: 9107659259.499998
[2026-01-11 02:27:21] 2026-01-11 01:26:29,368 | INFO     | mean x: 1768087243.5
[2026-01-11 02:27:21] 2026-01-11 01:26:29,368 | INFO     | mean y: 2503678.3405172415
[2026-01-11 02:27:21] 2026-01-11 01:26:29,368 | INFO     | intersect: -4156374078.475698
[2026-01-11 02:27:21] 2026-01-11 01:26:29,368 | INFO     | chi2: 0.0006990685892693813
[2026-01-11 02:27:21] 2026-01-11 01:26:29,369 | INFO     | current memory leak: 2.35 B/s (using 232 data points, chi2=0.00)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,369 | INFO     | could have reported an average CPU frequency of 2250 MHz (12 samples)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | ..............................
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | . Timing measurements:
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | . get job = 0 s
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | . initial setup = 12 s
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | . payload setup = 156 s
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | . stage-in = 0 s
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | . payload execution = 16458 s
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | . stage-out = 4 s
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | . log creation = 1 s
[2026-01-11 02:27:21] 2026-01-11 01:26:29,370 | INFO     | ..............................
[2026-01-11 02:27:21] 2026-01-11 01:26:29,756 | INFO     | 
[2026-01-11 02:27:21] 2026-01-11 01:26:29,756 | INFO     | job summary report
[2026-01-11 02:27:21] 2026-01-11 01:26:29,756 | INFO     | --------------------------------------------------
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | PanDA job id: 6963187313
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | task id: 47898826
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | errors: (none)
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | pilot state: finished 
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | transexitcode: 0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | exeerrorcode: 0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | exeerrordiag: 
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | exitcode: 0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | exitmsg: OK
[2026-01-11 02:27:21] 2026-01-11 01:26:29,757 | INFO     | cpuconsumptiontime: 72555 s
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | nevents: 400
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | neventsw: 0
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | pid: 19582
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | pgrp: 19582
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | corecount: 8
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | event service: False
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 23: 2284083, 34: 2284111, 45: 2284267, 56: 2284295, 66: 2284323, 77: 2284351, 88: 2284407, 99: 2284715, 10
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | --------------------------------------------------
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | 
[2026-01-11 02:27:21] 2026-01-11 01:26:29,758 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-11 02:27:21] 2026-01-11 01:26:30,326 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,326 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,326 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,326 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,328 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 02:27:21] 2026-01-11 01:26:30,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,328 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 02:27:21] 2026-01-11 01:26:30,328 | INFO     | job 6963187313 has completed (purged errors)
[2026-01-11 02:27:21] 2026-01-11 01:26:30,328 | INFO     | overall cleanup function is called
[2026-01-11 02:27:21] 2026-01-11 01:26:31,340 | INFO     | --- collectZombieJob: --- 10, [19582]
[2026-01-11 02:27:21] 2026-01-11 01:26:31,340 | INFO     | zombie collector waiting for pid 19582
[2026-01-11 02:27:21] 2026-01-11 01:26:31,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 02:27:21] 2026-01-11 01:26:31,341 | INFO     | collected zombie processes
[2026-01-11 02:27:21] 2026-01-11 01:26:31,341 | INFO     | will attempt to kill all subprocesses of pid=19582
[2026-01-11 02:27:21] 2026-01-11 01:26:31,432 | INFO     | process IDs to be killed: [19582] (in reverse order)
[2026-01-11 02:27:21] 2026-01-11 01:26:32,444 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 02:27:21] 2026-01-11 01:26:32,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:27:21] 2026-01-11 01:26:32,446 | INFO     | did not find any defunct processes belonging to 19582
[2026-01-11 02:27:21] 2026-01-11 01:26:32,448 | INFO     | did not find any defunct processes belonging to 19582
[2026-01-11 02:27:21] 2026-01-11 01:26:32,448 | INFO     | ready for new job
[2026-01-11 02:27:21] 2026-01-11 01:26:32,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:27:21] 2026-01-11 01:26:32,450 | INFO     | ***************************************
[2026-01-11 02:27:21] 2026-01-11 01:26:32,451 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:27:21] 2026-01-11 01:26:32,451 | INFO     | ***************************************
[2026-01-11 02:27:21] 2026-01-11 01:26:32,451 | INFO     | 
[2026-01-11 02:27:21] 2026-01-11 01:26:32,451 | INFO     | pilot is running in a VM
[2026-01-11 02:27:21] 2026-01-11 01:26:32,451 | INFO     | architecture information:
[2026-01-11 02:27:21] 2026-01-11 01:26:32,465 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:27:21] 2026-01-11 01:26:32,704 | INFO     | cat /etc/os-release:
[2026-01-11 02:27:21] NAME="CentOS Linux"
[2026-01-11 02:27:21] VERSION="7 (Core)"
[2026-01-11 02:27:21] ID="centos"
[2026-01-11 02:27:21] ID_LIKE="rhel fedora"
[2026-01-11 02:27:21] VERSION_ID="7"
[2026-01-11 02:27:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:27:21] ANSI_COLOR="0;31"
[2026-01-11 02:27:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:27:21] HOME_URL="https://www.centos.org/"
[2026-01-11 02:27:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:27:21] 
[2026-01-11 02:27:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:27:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:27:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:27:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:27:21] 
[2026-01-11 02:27:21] 2026-01-11 01:26:32,705 | INFO     | ***************************************
[2026-01-11 02:27:21] 2026-01-11 01:26:33,208 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-11 02:27:21] 2026-01-11 01:26:33,500 | INFO     | sufficient remaining disk space (497820893184 B)
[2026-01-11 02:27:21] 2026-01-11 01:26:33,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:27:21] 2026-01-11 01:26:33,500 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:27:21] 2026-01-11 01:26:33,501 | INFO     | update_server=False
[2026-01-11 02:27:21] 2026-01-11 01:26:33,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:27:21] 2026-01-11 01:26:33,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:27:21] 2026-01-11 01:26:33,949 | INFO     | aborting loop
[2026-01-11 02:27:21] 2026-01-11 01:26:34,263 | INFO     | all data control threads have been joined
[2026-01-11 02:27:21] 2026-01-11 01:26:34,506 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:34,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:27:21] 2026-01-11 01:26:34,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:27:21] 2026-01-11 01:26:34,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:34,741 | INFO     | all payload control threads have been joined
[2026-01-11 02:27:21] 2026-01-11 01:26:34,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:27:21] 2026-01-11 01:26:34,784 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:34,955 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,085 | INFO     | all job control threads have been joined
[2026-01-11 02:27:21] 2026-01-11 01:26:35,225 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,269 | INFO     | [data] control thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,351 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,476 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,541 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,581 | INFO     | [job] validate thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,747 | INFO     | [payload] control thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,770 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:35,865 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:36,091 | INFO     | [job] control thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:36,787 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:26:38,527 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:27:21] 2026-01-11 01:27:01,562 | INFO     | PID=13131 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 02:27:21] 2026-01-11 01:27:01,562 | INFO     | .. there are 2 such processes running
[2026-01-11 02:27:21] 2026-01-11 01:27:01,563 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:27:21] 2026-01-11 01:27:01,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:27:21] 2026-01-11 01:27:01,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:27:21] 2026-01-11 01:27:09,472 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:27:21] 2026-01-11 01:27:10,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267897419584)>', '<ExcThread(monitor, started 140267147470592)>']
[2026-01-11 02:27:21] 2026-01-11 01:27:10,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:27:21] 2026-01-11 01:27:10,617 | INFO     | [monitor] control thread has ended
[2026-01-11 02:27:21] 2026-01-11 01:27:15,505 | INFO     | all workflow threads have been joined
[2026-01-11 02:27:21] 2026-01-11 01:27:15,505 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:27:21] 2026-01-11 01:27:15,506 | INFO     | traces error code: 0
[2026-01-11 02:27:21] 2026-01-11 01:27:15,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:27:21] 2026-01-11 01:27:15,929 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:27:21] 2026-01-11 01:27:16,049 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:27:21] 2026-01-11 01:27:16,143 [wrapper] pilotpid: 13131
[2026-01-11 02:27:21] 2026-01-11 01:27:16,258 [wrapper] Pilot exit status: 0
[2026-01-11 02:27:21] 2026-01-11 01:27:16,675 [wrapper] pandaids: 6963187313
[2026-01-11 02:27:21] 2026-01-11 01:27:17,755 [wrapper] cleanup supervisor_pilot 29717 13132
[2026-01-11 02:27:21] 2026-01-11 01:27:17,879 [wrapper] Test setup, not cleaning
[2026-01-11 02:27:21] 2026-01-11 01:27:17,976 [wrapper] apfmon messages muted
[2026-01-11 02:27:21] 2026-01-11 01:27:18,107 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:27:21] 2026-01-11 01:27:18,190 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:27:21]  *** Error codes and diagnostics ***
[2026-01-11 02:27:21]     "exeErrorCode": 0,
[2026-01-11 02:27:21]     "exeErrorDiag": "",
[2026-01-11 02:27:21]     "pilotErrorCode": 0,
[2026-01-11 02:27:21]     "pilotErrorDiag": "",
[2026-01-11 02:27:21]  *** Listing of results directory ***
[2026-01-11 02:27:21] total 449048
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-11 02:27:21] -rwx------. 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:29 queuedata.json
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc       100 Jan 10 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:27:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 21:38 run_atlas
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc       105 Jan 10 21:38 job.xml
[2026-01-11 02:27:21] -rw-r--r--. 2 boinc boinc 223650940 Jan 10 21:38 EVNT.47898824._001426.pool.root.1
[2026-01-11 02:27:21] -rw-r--r--. 2 boinc boinc     15847 Jan 10 21:38 start_atlas.sh
[2026-01-11 02:27:21] drwxrwx--x. 2 boinc boinc        68 Jan 10 21:38 shared
[2026-01-11 02:27:21] -rw-r--r--. 2 boinc boinc    592406 Jan 10 21:38 input.tar.gz
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc      6390 Jan 10 21:38 init_data.xml
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc         0 Jan 10 21:38 boinc_lockfile
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc      2520 Jan 10 21:38 pandaJob.out
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc    989548 Jan 10 21:43 agis_schedconf.cvmfs.json
[2026-01-11 02:27:21] drwx------. 5 boinc boinc      4096 Jan 10 21:43 pilot3
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc 226719159 Jan 11 02:22 HITS.47898826._037187.pool.root.1
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc       531 Jan 11 02:23 boinc_task_state.xml
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc      1022 Jan 11 02:24 memory_monitor_summary.json
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc   1516240 Jan 11 02:24 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc    494389 Jan 11 02:24 log.47898826._037187.job.log.tgz.1
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc      7787 Jan 11 02:26 heartbeat.json
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc        95 Jan 11 02:27 pilot_heartbeat.json
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc      8192 Jan 11 02:27 boinc_mmap_file
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc        28 Jan 11 02:27 wrapper_checkpoint.txt
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc      4884 Jan 11 02:27 pilotlog.txt
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc   2280498 Jan 11 02:27 log.47898826._037187.job.log.1
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc       357 Jan 11 02:27 output.list
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc       620 Jan 11 02:27 runtime_log
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc   2795520 Jan 11 02:27 result.tar.gz
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc       657 Jan 11 02:27 TCOLDmvEJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaImKDmdA3uSn.diag
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc      8817 Jan 11 02:27 runtime_log.err
[2026-01-11 02:27:21] -rw-r--r--. 1 boinc boinc     20768 Jan 11 02:27 stderr.txt
[2026-01-11 02:27:21] HITS file was successfully produced:
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc 226719159 Jan 11 02:22 shared/HITS.pool.root.1
[2026-01-11 02:27:21]  *** Contents of shared directory: ***
[2026-01-11 02:27:21] total 443148
[2026-01-11 02:27:21] -rw-r--r--. 2 boinc boinc 223650940 Jan 10 21:38 ATLAS.root_0
[2026-01-11 02:27:21] -rw-r--r--. 2 boinc boinc     15847 Jan 10 21:38 start_atlas.sh
[2026-01-11 02:27:21] -rw-r--r--. 2 boinc boinc    592406 Jan 10 21:38 input.tar.gz
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc 226719159 Jan 11 02:22 HITS.pool.root.1
[2026-01-11 02:27:21] -rw-------. 1 boinc boinc   2795520 Jan 11 02:27 result.tar.gz
02:27:22 (9399): run_atlas exited; CPU time 72697.540378
02:27:22 (9399): called boinc_finish(0)

</stderr_txt>
]]>

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