Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:50:39 (10137): wrapper (7.7.26015): starting
23:50:39 (10137): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 23:50:39] Arguments: --nthreads 8
[2026-01-09 23:50:39] Threads: 8
[2026-01-09 23:50:39] Checking for CVMFS
[2026-01-09 23:50:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:50:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:50:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:50:43] 2.11.2.0 10693 36037 121232 154959 0 63 21107838 25165824 899 130560 0 15717766 99.823 8840087 3416 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 23:50:43] CVMFS is ok
[2026-01-09 23:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:50:43] Checking for apptainer binary...
[2026-01-09 23:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 23:50:43] Running /usr/bin/apptainer --version
[2026-01-09 23:50:43] apptainer version 1.3.2-1.el7
[2026-01-09 23:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:51:03] cg-vwn439.simple-grid.lan
[2026-01-09 23:51:03] apptainer works
[2026-01-09 23:51:03] Set ATHENA_PROC_NUMBER=8
[2026-01-09 23:51:03] Set ATHENA_CORE_NUMBER=8
[2026-01-09 23:51:03] Starting ATLAS job with PandaID=6963338543
[2026-01-09 23:51:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:06:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:06:48] 2026-01-10 05:05:54,116 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 06:06:48] 2026-01-10 05:05:54,118 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963338543/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:06:48] 2026-01-10 05:05:54,119 | INFO     | extracted standard info from prmon json
[2026-01-10 06:06:48] 2026-01-10 05:05:54,119 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:06:48] 2026-01-10 05:05:54,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:06:48] 2026-01-10 05:05:54,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 06:06:48] 2026-01-10 05:05:54,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 06:06:48] 2026-01-10 05:05:54,134 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:06:48] 2026-01-10 05:05:54,135 | INFO     | sum of square deviations: 13872669410.0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,139 | INFO     | sum of deviations: 190069603234.99997
[2026-01-10 06:06:48] 2026-01-10 05:05:54,139 | INFO     | mean x: 1768010630.0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,139 | INFO     | mean y: 2428235.3492957745
[2026-01-10 06:06:48] 2026-01-10 05:05:54,139 | INFO     | intersect: -24221105752.790504
[2026-01-10 06:06:48] 2026-01-10 05:05:54,140 | INFO     | chi2: 9.484620162157817
[2026-01-10 06:06:48] 2026-01-10 05:05:54,140 | INFO     | sum of square deviations: 13294714387.5
[2026-01-10 06:06:48] 2026-01-10 05:05:54,144 | INFO     | sum of deviations: 234873436078.00003
[2026-01-10 06:06:48] 2026-01-10 05:05:54,145 | INFO     | mean x: 1768010477.5
[2026-01-10 06:06:48] 2026-01-10 05:05:54,145 | INFO     | mean y: 2439949.765714286
[2026-01-10 06:06:48] 2026-01-10 05:05:54,145 | INFO     | intersect: -31232431576.52796
[2026-01-10 06:06:48] 2026-01-10 05:05:54,145 | INFO     | chi2: 7.9634331174944
[2026-01-10 06:06:48] 2026-01-10 05:05:54,146 | INFO     | current chi2=7.9634331174944 (change=16.03846035640648 %)
[2026-01-10 06:06:48] 2026-01-10 05:05:54,146 | INFO     | right removable region: 349
[2026-01-10 06:06:48] 2026-01-10 05:05:54,146 | INFO     | sum of square deviations: 13294714387.5
[2026-01-10 06:06:48] 2026-01-10 05:05:54,158 | INFO     | sum of deviations: 65108205094.499985
[2026-01-10 06:06:48] 2026-01-10 05:05:54,159 | INFO     | mean x: 1768010782.5
[2026-01-10 06:06:48] 2026-01-10 05:05:54,159 | INFO     | mean y: 2461198.477142857
[2026-01-10 06:06:48] 2026-01-10 05:05:54,159 | INFO     | intersect: -8656018049.826859
[2026-01-10 06:06:48] 2026-01-10 05:05:54,160 | INFO     | chi2: 4.536354381735595
[2026-01-10 06:06:48] 2026-01-10 05:05:54,160 | INFO     | current chi2=4.536354381735595 (change=52.171470188812044 %)
[2026-01-10 06:06:48] 2026-01-10 05:05:54,160 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,164 | INFO     | sum of deviations: -29738165083.0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,165 | INFO     | mean x: 1768010935.0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,165 | INFO     | mean y: 2486926.6695652176
[2026-01-10 06:06:48] 2026-01-10 05:05:54,165 | INFO     | intersect: 4131697724.435439
[2026-01-10 06:06:48] 2026-01-10 05:05:54,165 | INFO     | chi2: 1.837683955130522
[2026-01-10 06:06:48] 2026-01-10 05:05:54,166 | INFO     | current chi2=1.837683955130522 (change=59.4898502081438 %)
[2026-01-10 06:06:48] 2026-01-10 05:05:54,166 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,170 | INFO     | sum of deviations: -51409196889.5
[2026-01-10 06:06:48] 2026-01-10 05:05:54,170 | INFO     | mean x: 1768011087.5
[2026-01-10 06:06:48] 2026-01-10 05:05:54,170 | INFO     | mean y: 2492975.144117647
[2026-01-10 06:06:48] 2026-01-10 05:05:54,170 | INFO     | intersect: 7460355704.6825075
[2026-01-10 06:06:48] 2026-01-10 05:05:54,171 | INFO     | chi2: 1.6851284850227557
[2026-01-10 06:06:48] 2026-01-10 05:05:54,171 | INFO     | current chi2=1.6851284850227557 (change=8.301507431778766 %)
[2026-01-10 06:06:48] 2026-01-10 05:05:54,171 | INFO     | left removable region: 30
[2026-01-10 06:06:48] 2026-01-10 05:05:54,172 | INFO     | sum of square deviations: 10065751520.0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,175 | INFO     | sum of deviations: -8936696786.000002
[2026-01-10 06:06:48] 2026-01-10 05:05:54,175 | INFO     | mean x: 1768011362.0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,175 | INFO     | mean y: 2507265.2570532914
[2026-01-10 06:06:48] 2026-01-10 05:05:54,175 | INFO     | intersect: 1572204413.5527313
[2026-01-10 06:06:48] 2026-01-10 05:05:54,176 | INFO     | chi2: 0.021872427793348737
[2026-01-10 06:06:48] 2026-01-10 05:05:54,176 | INFO     | current memory leak: -0.89 B/s (using 319 data points, chi2=0.02)
[2026-01-10 06:06:48] 2026-01-10 05:05:54,177 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 06:06:48] 2026-01-10 05:05:54,177 | INFO     | ..............................
[2026-01-10 06:06:48] 2026-01-10 05:05:54,177 | INFO     | . Timing measurements:
[2026-01-10 06:06:48] 2026-01-10 05:05:54,177 | INFO     | . get job = 0 s
[2026-01-10 06:06:48] 2026-01-10 05:05:54,177 | INFO     | . initial setup = 12 s
[2026-01-10 06:06:48] 2026-01-10 05:05:54,177 | INFO     | . payload setup = 150 s
[2026-01-10 06:06:48] 2026-01-10 05:05:54,177 | INFO     | . stage-in = 0 s
[2026-01-10 06:06:48] 2026-01-10 05:05:54,178 | INFO     | . payload execution = 21772 s
[2026-01-10 06:06:48] 2026-01-10 05:05:54,178 | INFO     | . stage-out = 4 s
[2026-01-10 06:06:48] 2026-01-10 05:05:54,178 | INFO     | . log creation = 1 s
[2026-01-10 06:06:48] 2026-01-10 05:05:54,178 | INFO     | ..............................
[2026-01-10 06:06:48] 2026-01-10 05:05:54,334 | INFO     | 
[2026-01-10 06:06:48] 2026-01-10 05:05:54,334 | INFO     | job summary report
[2026-01-10 06:06:48] 2026-01-10 05:05:54,334 | INFO     | --------------------------------------------------
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | PanDA job id: 6963338543
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | task id: 47898826
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | errors: (none)
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | pilot state: finished 
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | transexitcode: 0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | exeerrorcode: 0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | exeerrordiag: 
[2026-01-10 06:06:48] 2026-01-10 05:05:54,335 | INFO     | exitcode: 0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | exitmsg: OK
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | cpuconsumptiontime: 81486 s
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | nevents: 400
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | neventsw: 0
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | pid: 20349
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | pgrp: 20349
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | corecount: 8
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | event service: False
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | sizes: {0: 2283091, 1: 2283947, 2: 2283947, 12: 2283975, 23: 2284003, 34: 2284031, 44: 2284187, 55: 2284215, 66: 2284243, 77: 2284271, 87: 2284327, 98: 2284635, 10
[2026-01-10 06:06:48] 2026-01-10 05:05:54,336 | INFO     | --------------------------------------------------
[2026-01-10 06:06:48] 2026-01-10 05:05:54,337 | INFO     | 
[2026-01-10 06:06:48] 2026-01-10 05:05:54,337 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 06:06:48] 2026-01-10 05:05:55,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:06:48] 2026-01-10 05:05:55,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,011 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:06:48] 2026-01-10 05:05:55,011 | INFO     | job 6963338543 has completed (purged errors)
[2026-01-10 06:06:48] 2026-01-10 05:05:55,011 | INFO     | overall cleanup function is called
[2026-01-10 06:06:48] 2026-01-10 05:05:56,020 | INFO     | --- collectZombieJob: --- 10, [20349]
[2026-01-10 06:06:48] 2026-01-10 05:05:56,020 | INFO     | zombie collector waiting for pid 20349
[2026-01-10 06:06:48] 2026-01-10 05:05:56,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:06:48] 2026-01-10 05:05:56,021 | INFO     | collected zombie processes
[2026-01-10 06:06:48] 2026-01-10 05:05:56,021 | INFO     | will attempt to kill all subprocesses of pid=20349
[2026-01-10 06:06:48] 2026-01-10 05:05:56,111 | INFO     | process IDs to be killed: [20349] (in reverse order)
[2026-01-10 06:06:48] 2026-01-10 05:05:56,889 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:06:48] 2026-01-10 05:05:56,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:06:48] 2026-01-10 05:05:56,892 | INFO     | did not find any defunct processes belonging to 20349
[2026-01-10 06:06:48] 2026-01-10 05:05:56,894 | INFO     | did not find any defunct processes belonging to 20349
[2026-01-10 06:06:48] 2026-01-10 05:05:56,894 | INFO     | ready for new job
[2026-01-10 06:06:48] 2026-01-10 05:05:56,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:06:48] 2026-01-10 05:05:56,896 | INFO     | ***************************************
[2026-01-10 06:06:48] 2026-01-10 05:05:56,897 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:06:48] 2026-01-10 05:05:56,897 | INFO     | ***************************************
[2026-01-10 06:06:48] 2026-01-10 05:05:56,897 | INFO     | 
[2026-01-10 06:06:48] 2026-01-10 05:05:56,897 | INFO     | pilot is running in a VM
[2026-01-10 06:06:48] 2026-01-10 05:05:56,898 | INFO     | architecture information:
[2026-01-10 06:06:48] 2026-01-10 05:05:56,915 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:06:48] 2026-01-10 05:05:57,320 | INFO     | cat /etc/os-release:
[2026-01-10 06:06:48] NAME="CentOS Linux"
[2026-01-10 06:06:48] VERSION="7 (Core)"
[2026-01-10 06:06:48] ID="centos"
[2026-01-10 06:06:48] ID_LIKE="rhel fedora"
[2026-01-10 06:06:48] VERSION_ID="7"
[2026-01-10 06:06:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:06:48] ANSI_COLOR="0;31"
[2026-01-10 06:06:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:06:48] HOME_URL="https://www.centos.org/"
[2026-01-10 06:06:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:06:48] 
[2026-01-10 06:06:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:06:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:06:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:06:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:06:48] 
[2026-01-10 06:06:48] 2026-01-10 05:05:57,321 | INFO     | ***************************************
[2026-01-10 06:06:48] 2026-01-10 05:05:57,824 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 06:06:48] 2026-01-10 05:05:58,095 | INFO     | sufficient remaining disk space (497428725760 B)
[2026-01-10 06:06:48] 2026-01-10 05:05:58,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:06:48] 2026-01-10 05:05:58,095 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:06:48] 2026-01-10 05:05:58,096 | INFO     | update_server=False
[2026-01-10 06:06:48] 2026-01-10 05:05:58,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:06:48] 2026-01-10 05:05:58,109 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 06:06:48] 2026-01-10 05:05:58,109 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 06:06:48] 2026-01-10 05:05:58,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:06:48] 2026-01-10 05:05:58,110 | INFO     | will abort loop
[2026-01-10 06:06:48] 2026-01-10 05:05:58,235 | INFO     | all data control threads have been joined
[2026-01-10 06:06:48] 2026-01-10 05:05:58,436 | INFO     | all payload control threads have been joined
[2026-01-10 06:06:48] 2026-01-10 05:05:58,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:06:48] 2026-01-10 05:05:59,102 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,115 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,207 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,241 | INFO     | [data] control thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,285 | INFO     | [job] validate thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,306 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:06:48] 2026-01-10 05:05:59,393 | INFO     | all job control threads have been joined
[2026-01-10 06:06:48] 2026-01-10 05:05:59,397 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,442 | INFO     | [payload] control thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,540 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:05:59,821 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:06:00,050 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:06:00,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:06:48] 2026-01-10 05:06:00,298 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:06:00,359 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:06:00,399 | INFO     | [job] control thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:06:00,571 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:06:04,249 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:06:48] 2026-01-10 05:06:27,156 | INFO     | PID=13894 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:06:48] 2026-01-10 05:06:27,157 | INFO     | .. there are 2 such processes running
[2026-01-10 06:06:48] 2026-01-10 05:06:27,158 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:06:48] 2026-01-10 05:06:27,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:06:48] 2026-01-10 05:06:27,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:06:48] 2026-01-10 05:06:36,805 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:06:48] 2026-01-10 05:06:37,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498593093440)>', '<ExcThread(monitor, started 140498152965888)>']
[2026-01-10 06:06:48] 2026-01-10 05:06:37,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:06:48] 2026-01-10 05:06:37,219 | INFO     | [monitor] control thread has ended
[2026-01-10 06:06:48] 2026-01-10 05:06:42,225 | INFO     | all workflow threads have been joined
[2026-01-10 06:06:48] 2026-01-10 05:06:42,225 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:06:48] 2026-01-10 05:06:42,226 | INFO     | traces error code: 0
[2026-01-10 06:06:48] 2026-01-10 05:06:42,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:06:48] 2026-01-10 05:06:42,806 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:06:48] 2026-01-10 05:06:42,939 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:06:48] 2026-01-10 05:06:43,083 [wrapper] pilotpid: 13894
[2026-01-10 06:06:48] 2026-01-10 05:06:43,159 [wrapper] Pilot exit status: 0
[2026-01-10 06:06:48] 2026-01-10 05:06:43,778 [wrapper] pandaids: 6963338543
[2026-01-10 06:06:48] 2026-01-10 05:06:44,725 [wrapper] cleanup supervisor_pilot 19669 13895
[2026-01-10 06:06:48] 2026-01-10 05:06:44,846 [wrapper] Test setup, not cleaning
[2026-01-10 06:06:48] 2026-01-10 05:06:44,942 [wrapper] apfmon messages muted
[2026-01-10 06:06:48] 2026-01-10 05:06:45,061 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:06:48] 2026-01-10 05:06:45,162 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:06:48]  *** Error codes and diagnostics ***
[2026-01-10 06:06:48]     "exeErrorCode": 0,
[2026-01-10 06:06:48]     "exeErrorDiag": "",
[2026-01-10 06:06:48]     "pilotErrorCode": 0,
[2026-01-10 06:06:48]     "pilotErrorDiag": "",
[2026-01-10 06:06:48]  *** Listing of results directory ***
[2026-01-10 06:06:48] total 441508
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 06:06:48] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc       100 Jan  9 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:06:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 23:50 run_atlas
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc       105 Jan  9 23:50 job.xml
[2026-01-10 06:06:48] -rw-r--r--. 2 boinc boinc 224627405 Jan  9 23:50 EVNT.47898824._000700.pool.root.1
[2026-01-10 06:06:48] -rw-r--r--. 2 boinc boinc    592409 Jan  9 23:50 input.tar.gz
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc      6391 Jan  9 23:50 init_data.xml
[2026-01-10 06:06:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 23:50 start_atlas.sh
[2026-01-10 06:06:48] drwxrwx--x. 2 boinc boinc        68 Jan  9 23:50 shared
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc         0 Jan  9 23:50 boinc_lockfile
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc      2519 Jan  9 23:51 pandaJob.out
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc    989375 Jan  9 23:54 agis_schedconf.cvmfs.json
[2026-01-10 06:06:48] drwx------. 5 boinc boinc      4096 Jan  9 23:54 pilot3
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc 216512600 Jan 10 06:02 HITS.47898826._039488.pool.root.1
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc       530 Jan 10 06:02 boinc_task_state.xml
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc      1011 Jan 10 06:03 memory_monitor_summary.json
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc   1516240 Jan 10 06:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc    575894 Jan 10 06:04 log.47898826._039488.job.log.tgz.1
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc      7779 Jan 10 06:05 heartbeat.json
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc        95 Jan 10 06:06 pilot_heartbeat.json
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc      5070 Jan 10 06:06 pilotlog.txt
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc        28 Jan 10 06:06 wrapper_checkpoint.txt
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc      8192 Jan 10 06:06 boinc_mmap_file
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc   2955469 Jan 10 06:06 log.47898826._039488.job.log.1
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc       357 Jan 10 06:06 output.list
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc       620 Jan 10 06:06 runtime_log
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc   3553280 Jan 10 06:06 result.tar.gz
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc      8817 Jan 10 06:06 runtime_log.err
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc       657 Jan 10 06:06 0gZKDm5CJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuFmKDmH2s6Yn.diag
[2026-01-10 06:06:48] -rw-r--r--. 1 boinc boinc     20788 Jan 10 06:06 stderr.txt
[2026-01-10 06:06:48] HITS file was successfully produced:
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc 216512600 Jan 10 06:02 shared/HITS.pool.root.1
[2026-01-10 06:06:48]  *** Contents of shared directory: ***
[2026-01-10 06:06:48] total 434872
[2026-01-10 06:06:48] -rw-r--r--. 2 boinc boinc 224627405 Jan  9 23:50 ATLAS.root_0
[2026-01-10 06:06:48] -rw-r--r--. 2 boinc boinc    592409 Jan  9 23:50 input.tar.gz
[2026-01-10 06:06:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 23:50 start_atlas.sh
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc 216512600 Jan 10 06:02 HITS.pool.root.1
[2026-01-10 06:06:48] -rw-------. 1 boinc boinc   3553280 Jan 10 06:06 result.tar.gz
06:06:49 (10137): run_atlas exited; CPU time 81699.293883
06:06:49 (10137): called boinc_finish(0)

</stderr_txt>
]]>

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