Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:09:56 (463256): wrapper (7.7.26015): starting
09:09:56 (463256): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 09:09:56] Arguments: --nthreads 3
[2026-01-10 09:09:56] Threads: 3
[2026-01-10 09:09:56] Checking for CVMFS
[2026-01-10 09:09:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:09:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:09:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:09:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:09:56] 2.9.2.0 129339 1307 71756 154972 3 57 20787721 36864001 0 130560 0 803835 99.986 48141 16424 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 09:09:56] CVMFS is ok
[2026-01-10 09:09:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:09:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:09:56] Further information can be found at the LHC@home message board.
[2026-01-10 09:09:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:09:56] Checking for apptainer binary...
[2026-01-10 09:09:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:09:56] Running /usr/bin/apptainer --version
[2026-01-10 09:09:56] apptainer version 1.4.1-1.1
[2026-01-10 09:09:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:09:56] thA359
[2026-01-10 09:09:56] apptainer works
[2026-01-10 09:09:56] Set ATHENA_PROC_NUMBER=3
[2026-01-10 09:09:56] Set ATHENA_CORE_NUMBER=3
[2026-01-10 09:09:56] Starting ATLAS job with PandaID=6963338553
[2026-01-10 09:09:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:05:30]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:05:30] 2026-01-10 10:04:53,786 | INFO     | job 6963338553 has finished - writing final server update
[2026-01-10 11:05:30] 2026-01-10 10:04:53,786 | INFO     | total number of processed events: 400 (read)
[2026-01-10 11:05:30] 2026-01-10 10:04:53,787 | INFO     | executing command: lscpu
[2026-01-10 11:05:30] 2026-01-10 10:04:53,800 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 11:05:30] 2026-01-10 10:04:55,345 | INFO     | monitor loop #531: job 0:6963338553 is in state 'finished'
[2026-01-10 11:05:30] 2026-01-10 10:04:55,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:05:30] 2026-01-10 10:04:55,579 | INFO     | time since job start (6893s) is within the limit (349056.0s)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,584 | INFO     | time since job start (6895s) is within the limit (349056.0s)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,848 | INFO     | monitor loop #532: job 0:6963338553 is in state 'finished'
[2026-01-10 11:05:30] 2026-01-10 10:04:57,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,972 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 11:05:30] 2026-01-10 10:04:57,973 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3793.9730000000004
[2026-01-10 11:05:30] 2026-01-10 10:04:57,974 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963338553/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,974 | INFO     | extracted standard info from prmon json
[2026-01-10 11:05:30] 2026-01-10 10:04:57,974 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:05:30] 2026-01-10 10:04:57,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:05:30] 2026-01-10 10:04:57,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:05:30] 2026-01-10 10:04:57,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:05:30] 2026-01-10 10:04:57,975 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | sum of square deviations: 447383272.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | sum of deviations: 4997684494.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | mean x: 1768036038.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | mean y: 2378021.9292035396
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | intersect: -19748218044.044838
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | chi2: 1.4331514137282257
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | sum of square deviations: 390582207.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | sum of deviations: 5284888567.499999
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | mean x: 1768035885.5
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | mean y: 2378795.935185185
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | intersect: -23920555917.29072
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | chi2: 1.4354539877347998
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | current chi2=1.4354539877347998 (change=-0.16066508985147068 %)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | right removable region: 107
[2026-01-10 11:05:30] 2026-01-10 10:04:57,976 | INFO     | sum of square deviations: 390582207.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | sum of deviations: -10034334263.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | mean x: 1768036190.5
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | mean y: 2417474.611111111
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | intersect: 45424522748.74651
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | chi2: 0.030972489442586532
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | current chi2=0.030972489442586532 (change=97.83885434951956 %)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | sum of square deviations: 338804492.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | sum of deviations: -9790966710.999996
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | mean x: 1768036343.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | mean y: 2416742.7281553396
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | intersect: 51096145978.6179
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | chi2: 0.0265197501410948
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | current chi2=0.0265197501410948 (change=14.376433349814327 %)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | left removable region: 20
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | sum of square deviations: 204163828.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | sum of deviations: -7345648548.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,977 | INFO     | mean x: 1768036465.0
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | mean y: 2414826.3908045976
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | intersect: 63614929438.61831
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | chi2: 0.022013568033759937
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | current memory leak: -35.98 B/s (using 87 data points, chi2=0.02)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | could have reported an average CPU frequency of 3881 MHz (7 samples)
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | ..............................
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | . Timing measurements:
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | . get job = 0 s
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | . initial setup = 1 s
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | . payload setup = 2 s
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | . stage-in = 0 s
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | . payload execution = 6867 s
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | . stage-out = 0 s
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | . log creation = 0 s
[2026-01-10 11:05:30] 2026-01-10 10:04:57,978 | INFO     | ..............................
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | 
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | job summary report
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | --------------------------------------------------
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | PanDA job id: 6963338553
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | task id: 47898826
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | errors: (none)
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | pilot state: finished 
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | transexitcode: 0
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | exeerrorcode: 0
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | exeerrordiag: 
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | exitcode: 0
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | exitmsg: OK
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | cpuconsumptiontime: 19963 s
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | nevents: 400
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | neventsw: 0
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | pid: 473434
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | pgrp: 473434
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | corecount: 3
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | event service: False
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | sizes: {0: 2283922, 2: 2284184, 11: 2284212, 6873: 2311590, 6874: 2311589, 6875: 2320649, 6878: 2320833, 6882: 2321027}
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | --------------------------------------------------
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | 
[2026-01-10 11:05:30] 2026-01-10 10:04:58,008 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,021 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | job 6963338553 has completed (purged errors)
[2026-01-10 11:05:30] 2026-01-10 10:04:58,022 | INFO     | overall cleanup function is called
[2026-01-10 11:05:30] 2026-01-10 10:04:59,028 | INFO     | --- collectZombieJob: --- 10, [473434]
[2026-01-10 11:05:30] 2026-01-10 10:04:59,029 | INFO     | zombie collector waiting for pid 473434
[2026-01-10 11:05:30] 2026-01-10 10:04:59,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:05:30] 2026-01-10 10:04:59,029 | INFO     | collected zombie processes
[2026-01-10 11:05:30] 2026-01-10 10:04:59,029 | INFO     | will attempt to kill all subprocesses of pid=473434
[2026-01-10 11:05:30] 2026-01-10 10:04:59,074 | INFO     | process IDs to be killed: [473434] (in reverse order)
[2026-01-10 11:05:30] 2026-01-10 10:04:59,099 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:05:30] 2026-01-10 10:04:59,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:05:30] 2026-01-10 10:04:59,101 | INFO     | did not find any defunct processes belonging to 473434
[2026-01-10 11:05:30] 2026-01-10 10:04:59,102 | INFO     | did not find any defunct processes belonging to 473434
[2026-01-10 11:05:30] 2026-01-10 10:04:59,102 | INFO     | ready for new job
[2026-01-10 11:05:30] 2026-01-10 10:04:59,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:05:30] 2026-01-10 10:04:59,103 | INFO     | ***************************************
[2026-01-10 11:05:30] 2026-01-10 10:04:59,103 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:05:30] 2026-01-10 10:04:59,103 | INFO     | ***************************************
[2026-01-10 11:05:30] 2026-01-10 10:04:59,103 | INFO     | 
[2026-01-10 11:05:30] 2026-01-10 10:04:59,103 | INFO     | architecture information:
[2026-01-10 11:05:30] 2026-01-10 10:04:59,103 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:05:30] 2026-01-10 10:04:59,112 | INFO     | cat /etc/os-release:
[2026-01-10 11:05:30] NAME="CentOS Linux"
[2026-01-10 11:05:30] VERSION="7 (Core)"
[2026-01-10 11:05:30] ID="centos"
[2026-01-10 11:05:30] ID_LIKE="rhel fedora"
[2026-01-10 11:05:30] VERSION_ID="7"
[2026-01-10 11:05:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:05:30] ANSI_COLOR="0;31"
[2026-01-10 11:05:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:05:30] HOME_URL="https://www.centos.org/"
[2026-01-10 11:05:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:05:30] 
[2026-01-10 11:05:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:05:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:05:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:05:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:05:30] 
[2026-01-10 11:05:30] 2026-01-10 10:04:59,112 | INFO     | ***************************************
[2026-01-10 11:05:30] 2026-01-10 10:04:59,615 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 11:05:30] 2026-01-10 10:04:59,629 | INFO     | sufficient remaining disk space (240031629312 B)
[2026-01-10 11:05:30] 2026-01-10 10:04:59,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:05:30] 2026-01-10 10:04:59,629 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:05:30] 2026-01-10 10:04:59,629 | INFO     | update_server=False
[2026-01-10 11:05:30] 2026-01-10 10:04:59,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:05:30] 2026-01-10 10:04:59,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:05:30] 2026-01-10 10:04:59,629 | INFO     | aborting loop
[2026-01-10 11:05:30] 2026-01-10 10:04:59,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:05:30] 2026-01-10 10:04:59,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:05:30] 2026-01-10 10:04:59,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:05:30] 2026-01-10 10:05:00,329 | INFO     | all job control threads have been joined
[2026-01-10 11:05:30] 2026-01-10 10:05:00,625 | INFO     | all data control threads have been joined
[2026-01-10 11:05:30] 2026-01-10 10:05:00,634 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:00,635 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:00,635 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:00,684 | INFO     | all payload control threads have been joined
[2026-01-10 11:05:30] 2026-01-10 10:05:00,948 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,154 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,280 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,335 | INFO     | [job] control thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,471 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,631 | INFO     | [data] control thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,635 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,690 | INFO     | [payload] control thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,726 | INFO     | [job] validate thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,846 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:01,851 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:02,027 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:03,799 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:05:30] 2026-01-10 10:05:09,995 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:05:30] 2026-01-10 10:05:10,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702552176448)>', '<ExcThread(monitor, started 140702270850816)>']
[2026-01-10 11:05:30] 2026-01-10 10:05:15,257 | INFO     | all workflow threads have been joined
[2026-01-10 11:05:30] 2026-01-10 10:05:15,258 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:05:30] 2026-01-10 10:05:15,258 | INFO     | traces error code: 0
[2026-01-10 11:05:30] 2026-01-10 10:05:15,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:05:30] 2026-01-10 10:05:30,702 | INFO     | PID=466980 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 11:05:30] 2026-01-10 10:05:30,702 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:05:30] 2026-01-10 10:05:30,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:05:30] 2026-01-10 10:05:30,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:05:30] 2026-01-10 10:05:30,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:05:30] 2026-01-10 10:05:30,702 | INFO     | [monitor] control thread has ended
[2026-01-10 11:05:30] 2026-01-10 10:05:30,749 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:05:30] 2026-01-10 10:05:30,751 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:05:30] 2026-01-10 10:05:30,754 [wrapper] pilotpid: 466980
[2026-01-10 11:05:30] 2026-01-10 10:05:30,756 [wrapper] Pilot exit status: 0
[2026-01-10 11:05:30] 2026-01-10 10:05:30,763 [wrapper] pandaids: 6963338553
[2026-01-10 11:05:30] 2026-01-10 10:05:30,780 [wrapper] cleanup supervisor_pilot  487826 466981
[2026-01-10 11:05:30] 2026-01-10 10:05:30,782 [wrapper] Test setup, not cleaning
[2026-01-10 11:05:30] 2026-01-10 10:05:30,785 [wrapper] apfmon messages muted
[2026-01-10 11:05:30] 2026-01-10 10:05:30,787 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:05:30] 2026-01-10 10:05:30,789 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:05:30]  *** Error codes and diagnostics ***
[2026-01-10 11:05:30]     "exeErrorCode": 0,
[2026-01-10 11:05:30]     "exeErrorDiag": "",
[2026-01-10 11:05:30]     "pilotErrorCode": 0,
[2026-01-10 11:05:30]     "pilotErrorDiag": "",
[2026-01-10 11:05:30]  *** Listing of results directory ***
[2026-01-10 11:05:30] total 444620
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 11:05:30] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc       100 Jan 10 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:05:30] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 09:09 run_atlas
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc       105 Jan 10 09:09 job.xml
[2026-01-10 11:05:30] -rw-r--r-- 2 boinc boinc 227745130 Jan 10 09:09 EVNT.47898824._000305.pool.root.1
[2026-01-10 11:05:30] -rw-r--r-- 2 boinc boinc    592400 Jan 10 09:09 input.tar.gz
[2026-01-10 11:05:30] -rw-r--r-- 2 boinc boinc     15847 Jan 10 09:09 start_atlas.sh
[2026-01-10 11:05:30] drwxrwx--x 2 boinc boinc      4096 Jan 10 09:09 shared
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc         0 Jan 10 09:09 boinc_setup_complete
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc      6438 Jan 10 09:09 init_data.xml
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc         0 Jan 10 09:09 boinc_lockfile
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc      2519 Jan 10 09:09 pandaJob.out
[2026-01-10 11:05:30] -rw------- 1 boinc boinc    989374 Jan 10 09:10 agis_schedconf.cvmfs.json
[2026-01-10 11:05:30] -rw------- 1 boinc boinc   1516240 Jan 10 09:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:05:30] drwx------ 5 boinc boinc      4096 Jan 10 09:10 pilot3
[2026-01-10 11:05:30] -rw------- 1 boinc boinc 221096314 Jan 10 11:04 HITS.47898826._039498.pool.root.1
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc       529 Jan 10 11:04 boinc_task_state.xml
[2026-01-10 11:05:30] -rw------- 1 boinc boinc        95 Jan 10 11:04 pilot_heartbeat.json
[2026-01-10 11:05:30] -rw------- 1 boinc boinc      1019 Jan 10 11:04 memory_monitor_summary.json
[2026-01-10 11:05:30] -rw------- 1 boinc boinc    277827 Jan 10 11:04 log.47898826._039498.job.log.tgz.1
[2026-01-10 11:05:30] -rw------- 1 boinc boinc      7756 Jan 10 11:04 heartbeat.json
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc      8192 Jan 10 11:05 boinc_mmap_file
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc        27 Jan 10 11:05 wrapper_checkpoint.txt
[2026-01-10 11:05:30] -rw------- 1 boinc boinc       746 Jan 10 11:05 pilotlog.txt
[2026-01-10 11:05:30] -rw------- 1 boinc boinc    992972 Jan 10 11:05 log.47898826._039498.job.log.1
[2026-01-10 11:05:30] -rw------- 1 boinc boinc       357 Jan 10 11:05 output.list
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc       620 Jan 10 11:05 runtime_log
[2026-01-10 11:05:30] -rw------- 1 boinc boinc   1290240 Jan 10 11:05 result.tar.gz
[2026-01-10 11:05:30] -rw------- 1 boinc boinc       659 Jan 10 11:05 tLPLDmHDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm11gKDmc9grdm.diag
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc      8897 Jan 10 11:05 runtime_log.err
[2026-01-10 11:05:30] -rw-r--r-- 1 boinc boinc     21353 Jan 10 11:05 stderr.txt
[2026-01-10 11:05:30] HITS file was successfully produced:
[2026-01-10 11:05:30] -rw------- 1 boinc boinc 221096314 Jan 10 11:04 shared/HITS.pool.root.1
[2026-01-10 11:05:30]  *** Contents of shared directory: ***
[2026-01-10 11:05:30] total 440188
[2026-01-10 11:05:30] -rw-r--r-- 2 boinc boinc 227745130 Jan 10 09:09 ATLAS.root_0
[2026-01-10 11:05:30] -rw-r--r-- 2 boinc boinc    592400 Jan 10 09:09 input.tar.gz
[2026-01-10 11:05:30] -rw-r--r-- 2 boinc boinc     15847 Jan 10 09:09 start_atlas.sh
[2026-01-10 11:05:30] -rw------- 1 boinc boinc 221096314 Jan 10 11:04 HITS.pool.root.1
[2026-01-10 11:05:30] -rw------- 1 boinc boinc   1290240 Jan 10 11:05 result.tar.gz
11:05:32 (463256): run_atlas exited; CPU time 19993.067060
11:05:32 (463256): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN