Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:20:13 (2911289): wrapper (7.7.26015): starting
11:20:13 (2911289): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:20:13] Arguments: --nthreads 8
[2026-01-09 11:20:13] Threads: 8
[2026-01-09 11:20:13] Checking for CVMFS
[2026-01-09 11:20:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:20:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:20:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:20:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:20:14] 2.11.3.0 10685 57081 195624 154955 2 20 26967340 45568001 16796 130560 2 280334358 99.778 162711410 18083 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-09 11:20:14] CVMFS is ok
[2026-01-09 11:20:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:20:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:20:15] Further information can be found at the LHC@home message board.
[2026-01-09 11:20:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:20:15] Checking for apptainer binary...
[2026-01-09 11:20:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:20:15] Running /usr/bin/apptainer --version
[2026-01-09 11:20:15] apptainer version 1.4.1-1.el9
[2026-01-09 11:20:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:20:15] wns0014.triumf.lcg
[2026-01-09 11:20:15] apptainer works
[2026-01-09 11:20:15] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:20:15] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:20:15] Starting ATLAS job with PandaID=6964171200
[2026-01-09 11:20:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:27:07]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:27:07] 2026-01-09 19:26:33,497 | WARNING  | wrong length of table data, x=[1767986537.0, 1767986598.0], y=[1647.0, 775848.0] (must be same and length>=4)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | ..............................
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | . Timing measurements:
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | . get job = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . initial setup = 4 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . payload setup = 24 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . stage-in = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . payload execution = 138 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . stage-out = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . log creation = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | ..............................
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964171200/pilotlog.txt
[2026-01-09 11:27:07] 2026-01-09 19:26:33,528 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 11:27:07] - Log from pilotlog.txt -
[2026-01-09 11:27:07] 2026-01-09 19:26:33,488 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6964171200/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,495 | INFO     | extracted standard info from prmon json
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:27:07] 2026-01-09 19:26:33,497 | WARNING  | wrong length of table data, x=[1767986537.0, 1767986598.0], y=[1647.0, 775848.0] (must be same and length>=4)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | ..............................
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | . Timing measurements:
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | . get job = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . initial setup = 4 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . payload setup = 24 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . stage-in = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . payload execution = 138 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . stage-out = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . log creation = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | ..............................
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964171200/pilotlog.txt
[2026-01-09 11:27:07] 2026-01-09 19:26:33,529 | WARNING  | 
[2026-01-09 11:27:07] [begin log extracts]
[2026-01-09 11:27:07] - Log from pilotlog.txt -
[2026-01-09 11:27:07] 2026-01-09 19:26:33,488 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6964171200/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,495 | INFO     | extracted standard info from prmon json
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:27:07] 2026-01-09 19:26:33,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:27:07] 2026-01-09 19:26:33,497 | WARNING  | wrong length of table data, x=[1767986537.0, 1767986598.0], y=[1647.0, 775848.0] (must be same and length>=4)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | ..............................
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | . Timing measurements:
[2026-01-09 11:27:07] 2026-01-09 19:26:33,499 | INFO     | . get job = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . initial setup = 4 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . payload setup = 24 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . stage-in = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . payload execution = 138 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . stage-out = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | . log creation = 0 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | ..............................
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 11:27:07] 2026-01-09 19:26:33,500 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6964171200/pilotlog.txt
[2026-01-09 11:27:07] [end log extracts]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,529 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,530 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 11:27:07] 2026-01-09 19:26:33,607 | INFO     | 
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | job summary report
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | --------------------------------------------------
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | PanDA job id: 6964171200
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | task id: 47961959
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 11:24:14,745 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | pilot state: failed 
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | transexitcode: 65
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | exeerrorcode: 65
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 11:27:07] 2026-01-09 19:26:33,608 | INFO     | exitcode: 65
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | cpuconsumptiontime: 48 s
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | nevents: 0
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | neventsw: 0
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | pid: 2923281
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | pgrp: 2923281
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | corecount: 8
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | event service: False
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | sizes: {0: 2284318, 1: 2284517, 11: 2284517, 17: 2284807, 22: 2284835, 166: 2310461, 167: 2314807, 297: 2314945}
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | --------------------------------------------------
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | 
[2026-01-09 11:27:07] 2026-01-09 19:26:33,609 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 11:27:07] 2026-01-09 19:26:33,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | job 6964171200 has completed (purged errors)
[2026-01-09 11:27:07] 2026-01-09 19:26:33,671 | INFO     | overall cleanup function is called
[2026-01-09 11:27:07] 2026-01-09 19:26:34,681 | INFO     | --- collectZombieJob: --- 10, [2923281]
[2026-01-09 11:27:07] 2026-01-09 19:26:34,681 | INFO     | zombie collector waiting for pid 2923281
[2026-01-09 11:27:07] 2026-01-09 19:26:34,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:27:07] 2026-01-09 19:26:34,682 | INFO     | collected zombie processes
[2026-01-09 11:27:07] 2026-01-09 19:26:34,682 | INFO     | will attempt to kill all subprocesses of pid=2923281
[2026-01-09 11:27:07] 2026-01-09 19:26:34,946 | INFO     | process IDs to be killed: [2923281] (in reverse order)
[2026-01-09 11:27:07] 2026-01-09 19:26:35,082 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:27:07] 2026-01-09 19:26:35,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:27:07] 2026-01-09 19:26:35,095 | INFO     | did not find any defunct processes belonging to 2923281
[2026-01-09 11:27:07] 2026-01-09 19:26:35,101 | INFO     | did not find any defunct processes belonging to 2923281
[2026-01-09 11:27:07] 2026-01-09 19:26:35,102 | INFO     | ready for new job
[2026-01-09 11:27:07] 2026-01-09 19:26:35,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:27:07] 2026-01-09 19:26:35,104 | INFO     | ***************************************
[2026-01-09 11:27:07] 2026-01-09 19:26:35,113 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:27:07] 2026-01-09 19:26:35,113 | INFO     | ***************************************
[2026-01-09 11:27:07] 2026-01-09 19:26:35,115 | INFO     | 
[2026-01-09 11:27:07] 2026-01-09 19:26:35,124 | INFO     | architecture information:
[2026-01-09 11:27:07] 2026-01-09 19:26:35,128 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:27:07] 2026-01-09 19:26:35,160 | INFO     | cat /etc/os-release:
[2026-01-09 11:27:07] NAME="CentOS Linux"
[2026-01-09 11:27:07] VERSION="7 (Core)"
[2026-01-09 11:27:07] ID="centos"
[2026-01-09 11:27:07] ID_LIKE="rhel fedora"
[2026-01-09 11:27:07] VERSION_ID="7"
[2026-01-09 11:27:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:27:07] ANSI_COLOR="0;31"
[2026-01-09 11:27:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:27:07] HOME_URL="https://www.centos.org/"
[2026-01-09 11:27:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:27:07] 
[2026-01-09 11:27:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:27:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:27:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:27:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:27:07] 
[2026-01-09 11:27:07] 2026-01-09 19:26:35,160 | INFO     | ***************************************
[2026-01-09 11:27:07] 2026-01-09 19:26:35,664 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 11:27:07] 2026-01-09 19:26:35,678 | INFO     | sufficient remaining disk space (1248018300928 B)
[2026-01-09 11:27:07] 2026-01-09 19:26:35,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:27:07] 2026-01-09 19:26:35,679 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:27:07] 2026-01-09 19:26:35,679 | INFO     | update_server=False
[2026-01-09 11:27:07] 2026-01-09 19:26:35,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:27:07] 2026-01-09 19:26:35,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:27:07] 2026-01-09 19:26:35,758 | INFO     | aborting loop
[2026-01-09 11:27:07] 2026-01-09 19:26:35,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:27:07] 2026-01-09 19:26:35,946 | INFO     | all payload control threads have been joined
[2026-01-09 11:27:07] 2026-01-09 19:26:36,083 | INFO     | all data control threads have been joined
[2026-01-09 11:27:07] 2026-01-09 19:26:36,657 | INFO     | all job control threads have been joined
[2026-01-09 11:27:07] 2026-01-09 19:26:36,684 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:36,758 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:36,765 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:36,807 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:36,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:27:07] 2026-01-09 19:26:36,925 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:36,951 | INFO     | [payload] control thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:37,091 | INFO     | [data] control thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:37,148 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:37,230 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:37,466 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:37,662 | INFO     | [job] control thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:37,810 | INFO     | [job] validate thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:38,019 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:38,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:27:07] 2026-01-09 19:26:38,825 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:39,625 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:39,827 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:27:07] 2026-01-09 19:26:57,439 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:27:07] 2026-01-09 19:26:59,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265842493248)>', '<ExcThread(monitor, started 140265167775488)>']
[2026-01-09 11:27:07] 2026-01-09 19:27:04,088 | INFO     | all workflow threads have been joined
[2026-01-09 11:27:07] 2026-01-09 19:27:04,088 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:27:07] 2026-01-09 19:27:04,088 | INFO     | traces error code: 0
[2026-01-09 11:27:07] 2026-01-09 19:27:04,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:27:07] 2026-01-09 19:27:07,024 | INFO     | PID=2916592 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 11:27:07] 2026-01-09 19:27:07,025 | INFO     | .. there are 25 such processes running
[2026-01-09 11:27:07] 2026-01-09 19:27:07,025 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:27:07] 2026-01-09 19:27:07,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:27:07] 2026-01-09 19:27:07,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:27:07] 2026-01-09 19:27:07,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:27:07] 2026-01-09 19:27:07,026 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 11:27:07] 2026-01-09 19:27:07,026 | INFO     | [monitor] control thread has ended
[2026-01-09 11:27:07] 2026-01-09 19:27:07,150 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:27:07] 2026-01-09 19:27:07,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:27:07] 2026-01-09 19:27:07,224 [wrapper] pilotpid: 2916592
[2026-01-09 11:27:07] 2026-01-09 19:27:07,283 [wrapper] Pilot exit status: 0
[2026-01-09 11:27:07] 2026-01-09 19:27:07,388 [wrapper] pandaids: 6964171200
[2026-01-09 11:27:07] 2026-01-09 19:27:07,618 [wrapper] cleanup supervisor_pilot 2916598 2916593
[2026-01-09 11:27:07] 2026-01-09 19:27:07,639 [wrapper] Test setup, not cleaning
[2026-01-09 11:27:07] 2026-01-09 19:27:07,654 [wrapper] apfmon messages muted
[2026-01-09 11:27:07] 2026-01-09 19:27:07,694 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:27:07] 2026-01-09 19:27:07,720 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:27:07]  *** Error codes and diagnostics ***
[2026-01-09 11:27:07]     "exeErrorCode": 65,
[2026-01-09 11:27:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 11:27:07]     "pilotErrorCode": 1305,
[2026-01-09 11:27:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 11:27:07]  *** Listing of results directory ***
[2026-01-09 11:27:07] total 409100
[2026-01-09 11:27:07] -rwx------. 1 boinc boinc     36322 Jan  9 03:49 runpilot2-wrapper.sh
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc      5112 Jan  9 03:49 queuedata.json
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc    579449 Jan  9 03:49 pilot3.tar.gz
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc       100 Jan  9 11:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:27:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 11:20 run_atlas
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc       105 Jan  9 11:20 job.xml
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc      6445 Jan  9 11:20 init_data.xml
[2026-01-09 11:27:07] -rw-r--r--. 2 boinc boinc 414697788 Jan  9 11:20 EVNT.47961955._000003.pool.root.1
[2026-01-09 11:27:07] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:20 start_atlas.sh
[2026-01-09 11:27:07] drwxrwx--x. 2 boinc boinc      4096 Jan  9 11:20 shared
[2026-01-09 11:27:07] -rw-r--r--. 2 boinc boinc    592592 Jan  9 11:20 input.tar.gz
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc         0 Jan  9 11:20 boinc_lockfile
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc      2870 Jan  9 11:20 pandaJob.out
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc    989364 Jan  9 11:20 agis_schedconf.cvmfs.json
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc   1516240 Jan  9 11:20 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:27:07] drwx------. 5 boinc boinc      4096 Jan  9 11:20 pilot3
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc       525 Jan  9 11:23 boinc_task_state.xml
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc       991 Jan  9 11:24 memory_monitor_summary.json
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc     49523 Jan  9 11:24 log.47961959._000326.job.log.tgz.1
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc     10326 Jan  9 11:26 heartbeat.json
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc        23 Jan  9 11:27 wrapper_checkpoint.txt
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:27 boinc_mmap_file
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc        95 Jan  9 11:27 pilot_heartbeat.json
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc       893 Jan  9 11:27 pilotlog.txt
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc    104667 Jan  9 11:27 log.47961959._000326.job.log.1
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc       186 Jan  9 11:27 output.list
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:27 runtime_log
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc    174080 Jan  9 11:27 result.tar.gz
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc      8634 Jan  9 11:27 runtime_log.err
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc       647 Jan  9 11:27 j1xLDmxAQy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6RhKDmUZJ5So.diag
[2026-01-09 11:27:07] -rw-r--r--. 1 boinc boinc     22347 Jan  9 11:27 stderr.txt
[2026-01-09 11:27:07] No HITS result produced
[2026-01-09 11:27:07]  *** Contents of shared directory: ***
[2026-01-09 11:27:07] total 405752
[2026-01-09 11:27:07] -rw-r--r--. 2 boinc boinc 414697788 Jan  9 11:20 ATLAS.root_0
[2026-01-09 11:27:07] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:20 start_atlas.sh
[2026-01-09 11:27:07] -rw-r--r--. 2 boinc boinc    592592 Jan  9 11:20 input.tar.gz
[2026-01-09 11:27:07] -rw-------. 1 boinc boinc    174080 Jan  9 11:27 result.tar.gz
11:27:09 (2911289): run_atlas exited; CPU time 54.235831
11:27:09 (2911289): called boinc_finish(0)

</stderr_txt>
]]>

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