Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:33:58 (408373): wrapper (7.7.26015): starting
14:33:58 (408373): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:33:58] Arguments: --nthreads 8
[2026-01-09 14:33:58] Threads: 8
[2026-01-09 14:33:58] Checking for CVMFS
[2026-01-09 14:33:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:33:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:33:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:34:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:34:00] 2.13.3.0 5206 70923 743372 154955 0 463 30904514 40960001 61679 16776704 0 647278900 99.813 309402635 29785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:34:00] CVMFS is ok
[2026-01-09 14:34:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:34:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:34:00] Further information can be found at the LHC@home message board.
[2026-01-09 14:34:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:34:00] Checking for apptainer binary...
[2026-01-09 14:34:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:34:00] Running /usr/bin/apptainer --version
[2026-01-09 14:34:00] apptainer version 1.4.5-2.el9
[2026-01-09 14:34:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:34:01] lc-12-9.aglt2.org
[2026-01-09 14:34:01] apptainer works
[2026-01-09 14:34:01] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:34:01] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:34:01] Starting ATLAS job with PandaID=6963677968
[2026-01-09 14:34:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:05:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:05:16] 2026-01-10 04:04:33,342 | INFO     | time since job start (30568s) is within the limit (349056.0s)
[2026-01-09 23:05:16] 2026-01-10 04:04:34,046 | INFO     | monitor loop #1482: job 0:6963677968 is in state 'finished'
[2026-01-09 23:05:16] 2026-01-10 04:04:34,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:05:16] 2026-01-10 04:04:36,552 | INFO     | monitor loop #1483: job 0:6963677968 is in state 'finished'
[2026-01-09 23:05:16] 2026-01-10 04:04:36,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:05:16] 2026-01-10 04:04:37,662 | INFO     | PID=421830 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 23:05:16] 2026-01-10 04:04:37,662 | INFO     | .. there are 93 such processes running
[2026-01-09 23:05:16] 2026-01-10 04:04:38,667 | INFO     | time since job start (30573s) is within the limit (349056.0s)
[2026-01-09 23:05:16] 2026-01-10 04:04:38,667 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 23:05:16] 2026-01-10 04:04:38,680 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2941.8323437500003
[2026-01-09 23:05:16] 2026-01-10 04:04:38,732 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963677968/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:05:16] 2026-01-10 04:04:38,733 | INFO     | extracted standard info from prmon json
[2026-01-09 23:05:16] 2026-01-10 04:04:38,733 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:05:16] 2026-01-10 04:04:38,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:05:16] 2026-01-10 04:04:38,733 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:05:16] 2026-01-10 04:04:38,733 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:05:16] 2026-01-10 04:04:38,805 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:05:16] 2026-01-10 04:04:38,806 | INFO     | sum of square deviations: 38528294168.47293
[2026-01-09 23:05:16] 2026-01-10 04:04:38,838 | INFO     | sum of deviations: 181942841591.94815
[2026-01-09 23:05:16] 2026-01-10 04:04:38,838 | INFO     | mean x: 1768002637.3086174
[2026-01-09 23:05:16] 2026-01-10 04:04:38,838 | INFO     | mean y: 2498804.779559118
[2026-01-09 23:05:16] 2026-01-10 04:04:38,838 | INFO     | intersect: -8346571163.576581
[2026-01-09 23:05:16] 2026-01-10 04:04:38,839 | INFO     | chi2: 3.5450191502899733
[2026-01-09 23:05:16] 2026-01-10 04:04:38,840 | INFO     | sum of square deviations: 37381742895.492226
[2026-01-09 23:05:16] 2026-01-10 04:04:38,914 | INFO     | sum of deviations: 210027425533.1884
[2026-01-09 23:05:16] 2026-01-10 04:04:38,915 | INFO     | mean x: 1768002484.8117409
[2026-01-09 23:05:16] 2026-01-10 04:04:38,915 | INFO     | mean y: 2502506.0020242915
[2026-01-09 23:05:16] 2026-01-10 04:04:38,915 | INFO     | intersect: -9930929738.166227
[2026-01-09 23:05:16] 2026-01-10 04:04:38,916 | INFO     | chi2: 2.866928385800313
[2026-01-09 23:05:16] 2026-01-10 04:04:38,916 | INFO     | current chi2=2.866928385800313 (change=19.12798593582193 %)
[2026-01-09 23:05:16] 2026-01-10 04:04:38,916 | INFO     | right removable region: 493
[2026-01-09 23:05:16] 2026-01-10 04:04:38,916 | INFO     | sum of square deviations: 37381648955.492226
[2026-01-09 23:05:16] 2026-01-10 04:04:38,958 | INFO     | sum of deviations: 52718651056.01011
[2026-01-09 23:05:16] 2026-01-10 04:04:38,958 | INFO     | mean x: 1768002789.8117409
[2026-01-09 23:05:16] 2026-01-10 04:04:38,976 | INFO     | mean y: 2515959.860323887
[2026-01-09 23:05:16] 2026-01-10 04:04:38,977 | INFO     | intersect: -2490865812.9210863
[2026-01-09 23:05:16] 2026-01-10 04:04:38,978 | INFO     | chi2: 0.9548341688456424
[2026-01-09 23:05:16] 2026-01-10 04:04:38,978 | INFO     | current chi2=0.9548341688456424 (change=73.06547219166532 %)
[2026-01-09 23:05:16] 2026-01-10 04:04:38,978 | INFO     | sum of square deviations: 36257980917.50092
[2026-01-09 23:05:16] 2026-01-10 04:04:38,997 | INFO     | sum of deviations: 15180919914.67693
[2026-01-09 23:05:16] 2026-01-10 04:04:38,997 | INFO     | mean x: 1768002942.3149285
[2026-01-09 23:05:16] 2026-01-10 04:04:38,997 | INFO     | mean y: 2521047.482617587
[2026-01-09 23:05:16] 2026-01-10 04:04:38,998 | INFO     | intersect: -737727317.0709937
[2026-01-09 23:05:16] 2026-01-10 04:04:38,998 | INFO     | chi2: 0.7573305770266914
[2026-01-09 23:05:16] 2026-01-10 04:04:38,998 | INFO     | current chi2=0.7573305770266914 (change=20.684596159532628 %)
[2026-01-09 23:05:16] 2026-01-10 04:04:38,998 | INFO     | left removable region: 20
[2026-01-09 23:05:16] 2026-01-10 04:04:39,005 | INFO     | sum of square deviations: 32814083175.509384
[2026-01-09 23:05:16] 2026-01-10 04:04:39,030 | INFO     | sum of deviations: 38415656344.771645
[2026-01-09 23:05:16] 2026-01-10 04:04:39,030 | INFO     | mean x: 1768003064.3234673
[2026-01-09 23:05:16] 2026-01-10 04:04:39,030 | INFO     | mean y: 2525768.2367864694
[2026-01-09 23:05:16] 2026-01-10 04:04:39,031 | INFO     | intersect: -2067286689.1852908
[2026-01-09 23:05:16] 2026-01-10 04:04:39,031 | INFO     | chi2: 0.037691737620743494
[2026-01-09 23:05:16] 2026-01-10 04:04:39,031 | INFO     | current memory leak: 1.17 B/s (using 473 data points, chi2=0.04)
[2026-01-09 23:05:16] 2026-01-10 04:04:39,037 | INFO     | could have reported an average CPU frequency of 2931 MHz (20 samples)
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | ..............................
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | . Timing measurements:
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | . get job = 0 s
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | . initial setup = 4 s
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | . payload setup = 42 s
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | . stage-in = 0 s
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | . payload execution = 30420 s
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | . stage-out = 4 s
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | . log creation = 0 s
[2026-01-09 23:05:16] 2026-01-10 04:04:39,038 | INFO     | ..............................
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | 
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | job summary report
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | --------------------------------------------------
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | PanDA job id: 6963677968
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | task id: 47898826
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | errors: (none)
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | pilot state: finished 
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | transexitcode: 0
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | exeerrorcode: 0
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | exeerrordiag: 
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | exitcode: 0
[2026-01-09 23:05:16] 2026-01-10 04:04:39,404 | INFO     | exitmsg: OK
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | cpuconsumptiontime: 59129 s
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | nevents: 400
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | neventsw: 0
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | pid: 436635
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | pgrp: 436635
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | corecount: 8
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | event service: False
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | sizes: {0: 2283748, 1: 2283776, 2: 2283975, 3: 2283975, 14: 2284003, 25: 2284031, 31: 2284449, 36: 2284477, 30468: 2322233, 30473: 2331231, 30474: 2331287, 30505: 
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | --------------------------------------------------
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | 
[2026-01-09 23:05:16] 2026-01-10 04:04:39,405 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 23:05:16] 2026-01-10 04:04:39,512 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,512 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,512 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,512 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:05:16] 2026-01-10 04:04:39,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:05:16] 2026-01-10 04:04:39,514 | INFO     | job 6963677968 has completed (purged errors)
[2026-01-09 23:05:16] 2026-01-10 04:04:39,514 | INFO     | overall cleanup function is called
[2026-01-09 23:05:16] 2026-01-10 04:04:40,545 | INFO     | --- collectZombieJob: --- 10, [436635]
[2026-01-09 23:05:16] 2026-01-10 04:04:40,545 | INFO     | zombie collector waiting for pid 436635
[2026-01-09 23:05:16] 2026-01-10 04:04:40,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:05:16] 2026-01-10 04:04:40,545 | INFO     | collected zombie processes
[2026-01-09 23:05:16] 2026-01-10 04:04:40,545 | INFO     | will attempt to kill all subprocesses of pid=436635
[2026-01-09 23:05:16] 2026-01-10 04:04:41,837 | INFO     | process IDs to be killed: [436635] (in reverse order)
[2026-01-09 23:05:16] 2026-01-10 04:04:42,358 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:05:16] 2026-01-10 04:04:42,373 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:05:16] 2026-01-10 04:04:42,541 | INFO     | did not find any defunct processes belonging to 436635
[2026-01-09 23:05:16] 2026-01-10 04:04:42,649 | INFO     | did not find any defunct processes belonging to 436635
[2026-01-09 23:05:16] 2026-01-10 04:04:42,650 | INFO     | ready for new job
[2026-01-09 23:05:16] 2026-01-10 04:04:42,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:05:16] 2026-01-10 04:04:42,660 | INFO     | ***************************************
[2026-01-09 23:05:16] 2026-01-10 04:04:42,660 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:05:16] 2026-01-10 04:04:42,660 | INFO     | ***************************************
[2026-01-09 23:05:16] 2026-01-10 04:04:42,660 | INFO     | 
[2026-01-09 23:05:16] 2026-01-10 04:04:42,675 | INFO     | architecture information:
[2026-01-09 23:05:16] 2026-01-10 04:04:42,686 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:05:16] 2026-01-10 04:04:42,799 | INFO     | cat /etc/os-release:
[2026-01-09 23:05:16] NAME="CentOS Linux"
[2026-01-09 23:05:16] VERSION="7 (Core)"
[2026-01-09 23:05:16] ID="centos"
[2026-01-09 23:05:16] ID_LIKE="rhel fedora"
[2026-01-09 23:05:16] VERSION_ID="7"
[2026-01-09 23:05:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:05:16] ANSI_COLOR="0;31"
[2026-01-09 23:05:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:05:16] HOME_URL="https://www.centos.org/"
[2026-01-09 23:05:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:05:16] 
[2026-01-09 23:05:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:05:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:05:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:05:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:05:16] 
[2026-01-09 23:05:16] 2026-01-10 04:04:42,800 | INFO     | ***************************************
[2026-01-09 23:05:16] 2026-01-10 04:04:43,303 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 23:05:16] 2026-01-10 04:04:43,337 | INFO     | sufficient remaining disk space (406620995584 B)
[2026-01-09 23:05:16] 2026-01-10 04:04:43,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:05:16] 2026-01-10 04:04:43,337 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:05:16] 2026-01-10 04:04:43,337 | INFO     | update_server=False
[2026-01-09 23:05:16] 2026-01-10 04:04:43,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:05:16] 2026-01-10 04:04:43,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:05:16] 2026-01-10 04:04:43,354 | INFO     | aborting loop
[2026-01-09 23:05:16] 2026-01-10 04:04:43,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:05:16] 2026-01-10 04:04:43,536 | INFO     | all job control threads have been joined
[2026-01-09 23:05:16] 2026-01-10 04:04:44,066 | INFO     | all data control threads have been joined
[2026-01-09 23:05:16] 2026-01-10 04:04:44,344 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:44,360 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:44,429 | INFO     | all payload control threads have been joined
[2026-01-09 23:05:16] 2026-01-10 04:04:44,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:05:16] 2026-01-10 04:04:44,543 | INFO     | [job] control thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:44,631 | INFO     | [job] validate thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:44,631 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:44,779 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:44,796 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,048 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,072 | INFO     | [data] control thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,095 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,139 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,299 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,361 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,438 | INFO     | [payload] control thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,446 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:04:45,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:05:16] 2026-01-10 04:04:49,629 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:05:16] 2026-01-10 04:05:02,650 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:05:16] 2026-01-10 04:05:02,948 [wrapper] supervise_pilot (15 min periods counter: 35)
[2026-01-09 23:05:16] 2026-01-10 04:05:03,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989245151040)>', '<ExcThread(monitor, started 139988972836608)>']
[2026-01-09 23:05:16] 2026-01-10 04:05:08,682 | INFO     | all workflow threads have been joined
[2026-01-09 23:05:16] 2026-01-10 04:05:08,682 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:05:16] 2026-01-10 04:05:08,682 | INFO     | traces error code: 0
[2026-01-09 23:05:16] 2026-01-10 04:05:08,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:05:16] 2026-01-10 04:05:13,639 | INFO     | PID=421830 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 23:05:16] 2026-01-10 04:05:13,649 | INFO     | .. there are 93 such processes running
[2026-01-09 23:05:16] 2026-01-10 04:05:13,649 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:05:16] 2026-01-10 04:05:13,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:05:16] 2026-01-10 04:05:13,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:05:16] 2026-01-10 04:05:13,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:05:16] 2026-01-10 04:05:13,649 | INFO     | [monitor] control thread has ended
[2026-01-09 23:05:16] 2026-01-10 04:05:14,612 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:05:16] 2026-01-10 04:05:14,665 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:05:16] 2026-01-10 04:05:14,674 [wrapper] pilotpid: 421830
[2026-01-09 23:05:16] 2026-01-10 04:05:14,688 [wrapper] Pilot exit status: 0
[2026-01-09 23:05:16] 2026-01-10 04:05:14,812 [wrapper] pandaids: 6963677968
[2026-01-09 23:05:16] 2026-01-10 04:05:15,385 [wrapper] cleanup supervisor_pilot 1168840 421831
[2026-01-09 23:05:16] 2026-01-10 04:05:15,403 [wrapper] Test setup, not cleaning
[2026-01-09 23:05:16] 2026-01-10 04:05:15,440 [wrapper] apfmon messages muted
[2026-01-09 23:05:16] 2026-01-10 04:05:15,475 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:05:16] 2026-01-10 04:05:15,493 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:05:16]  *** Error codes and diagnostics ***
[2026-01-09 23:05:16]     "exeErrorCode": 0,
[2026-01-09 23:05:16]     "exeErrorDiag": "",
[2026-01-09 23:05:16]     "pilotErrorCode": 0,
[2026-01-09 23:05:16]     "pilotErrorDiag": "",
[2026-01-09 23:05:16]  *** Listing of results directory ***
[2026-01-09 23:05:16] total 443836
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 23:05:16] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:26 queuedata.json
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:05:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:33 run_atlas
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:33 job.xml
[2026-01-09 23:05:16] -rw-r--r--. 2 boincer umatlas 224708151 Jan  9 14:33 EVNT.47898824._000853.pool.root.1
[2026-01-09 23:05:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:33 start_atlas.sh
[2026-01-09 23:05:16] drwxrwx--x. 2 boincer umatlas        68 Jan  9 14:33 shared
[2026-01-09 23:05:16] -rw-r--r--. 2 boincer umatlas    592405 Jan  9 14:33 input.tar.gz
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:33 boinc_lockfile
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 14:34 pandaJob.out
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas    989364 Jan  9 14:35 agis_schedconf.cvmfs.json
[2026-01-09 23:05:16] drwx------. 5 boincer umatlas      4096 Jan  9 14:35 pilot3
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas 217951293 Jan  9 23:03 HITS.47898826._039716.pool.root.1
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas       531 Jan  9 23:03 boinc_task_state.xml
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas      1043 Jan  9 23:03 memory_monitor_summary.json
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas    636633 Jan  9 23:04 log.47898826._039716.job.log.tgz.1
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas      6798 Jan  9 23:04 init_data.xml
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas        95 Jan  9 23:04 pilot_heartbeat.json
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas      7822 Jan  9 23:04 heartbeat.json
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:05 boinc_mmap_file
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas        28 Jan  9 23:05 wrapper_checkpoint.txt
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas       822 Jan  9 23:05 pilotlog.txt
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas   3322750 Jan  9 23:05 log.47898826._039716.job.log.1
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas       357 Jan  9 23:05 output.list
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:05 runtime_log
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas   3983360 Jan  9 23:05 result.tar.gz
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas      8813 Jan  9 23:05 runtime_log.err
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas       656 Jan  9 23:05 dD5MDmHDJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzGmKDmaQm4Bn.diag
[2026-01-09 23:05:16] -rw-r--r--. 1 boincer umatlas     21493 Jan  9 23:05 stderr.txt
[2026-01-09 23:05:16] HITS file was successfully produced:
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas 217951293 Jan  9 23:03 shared/HITS.pool.root.1
[2026-01-09 23:05:16]  *** Contents of shared directory: ***
[2026-01-09 23:05:16] total 436780
[2026-01-09 23:05:16] -rw-r--r--. 2 boincer umatlas 224708151 Jan  9 14:33 ATLAS.root_0
[2026-01-09 23:05:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:33 start_atlas.sh
[2026-01-09 23:05:16] -rw-r--r--. 2 boincer umatlas    592405 Jan  9 14:33 input.tar.gz
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas 217951293 Jan  9 23:03 HITS.pool.root.1
[2026-01-09 23:05:16] -rw-------. 1 boincer umatlas   3983360 Jan  9 23:05 result.tar.gz
23:05:17 (408373): run_atlas exited; CPU time 61024.163758
23:05:17 (408373): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN