Name 5gGKDm5CJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmi1gKDm7Kv6qm_1
Workunit 238429289
Created 9 Jan 2026, 11:49:30 UTC
Sent 9 Jan 2026, 19:22:31 UTC
Report deadline 17 Jan 2026, 19:22:31 UTC
Received 10 Jan 2026, 5:22:47 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10907201
Run time 6 hours 1 min 34 sec
CPU time 21 hours 52 min 18 sec
Validate state Valid
Credit 715.08
Device peak FLOPS 21.16 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.50 GB
Peak swap size 14.71 GB
Peak disk usage 648.44 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:19:38 (30695): wrapper (7.7.26015): starting
00:19:38 (30695): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 00:19:38] Arguments: --nthreads 8
[2026-01-10 00:19:38] Threads: 8
[2026-01-10 00:19:38] Checking for CVMFS
[2026-01-10 00:19:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:19:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:19:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:19:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:19:41] 2.11.2.0 24946 36067 125844 154961 3 60 15974336 25165825 899 130560 0 16443920 99.805 11769411 3331 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 00:19:41] CVMFS is ok
[2026-01-10 00:19:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:19:41] Checking for apptainer binary...
[2026-01-10 00:19:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:19:41] Running /usr/bin/apptainer --version
[2026-01-10 00:19:41] apptainer version 1.3.2-1.el7
[2026-01-10 00:19:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:19:54] cg-vwn407.simple-grid.lan
[2026-01-10 00:19:54] apptainer works
[2026-01-10 00:19:54] Set ATHENA_PROC_NUMBER=8
[2026-01-10 00:19:54] Set ATHENA_CORE_NUMBER=8
[2026-01-10 00:19:54] Starting ATLAS job with PandaID=6963193703
[2026-01-10 00:19:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:21:08]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:21:08] 2026-01-10 05:20:31,144 | INFO     | time since job start (21380s) is within the limit (349056.0s)
[2026-01-10 06:21:08] 2026-01-10 05:20:31,843 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:21:08] 2026-01-10 05:20:31,844 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 06:21:08] 2026-01-10 05:20:31,846 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963193703/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:21:08] 2026-01-10 05:20:31,846 | INFO     | extracted standard info from prmon json
[2026-01-10 06:21:08] 2026-01-10 05:20:31,847 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:21:08] 2026-01-10 05:20:31,847 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:21:08] 2026-01-10 05:20:31,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 06:21:08] 2026-01-10 05:20:31,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 06:21:08] 2026-01-10 05:20:31,862 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:21:08] 2026-01-10 05:20:31,863 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 06:21:08] 2026-01-10 05:20:31,867 | INFO     | sum of deviations: 150527019873.5
[2026-01-10 06:21:08] 2026-01-10 05:20:31,867 | INFO     | mean x: 1768011929.5
[2026-01-10 06:21:08] 2026-01-10 05:20:31,867 | INFO     | mean y: 2453698.7088235295
[2026-01-10 06:21:08] 2026-01-10 05:20:31,867 | INFO     | intersect: -21834308084.387337
[2026-01-10 06:21:08] 2026-01-10 05:20:31,868 | INFO     | chi2: 8.59963452125658
[2026-01-10 06:21:08] 2026-01-10 05:20:31,868 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 06:21:08] 2026-01-10 05:20:31,872 | INFO     | sum of deviations: 171010575538.00006
[2026-01-10 06:21:08] 2026-01-10 05:20:31,872 | INFO     | mean x: 1768011777.0
[2026-01-10 06:21:08] 2026-01-10 05:20:31,872 | INFO     | mean y: 2459516.9492537314
[2026-01-10 06:21:08] 2026-01-10 05:20:31,873 | INFO     | intersect: -25933310531.957558
[2026-01-10 06:21:08] 2026-01-10 05:20:31,873 | INFO     | chi2: 7.885888164868494
[2026-01-10 06:21:08] 2026-01-10 05:20:31,873 | INFO     | current chi2=7.885888164868494 (change=8.299728955036942 %)
[2026-01-10 06:21:08] 2026-01-10 05:20:31,873 | INFO     | right removable region: 334
[2026-01-10 06:21:08] 2026-01-10 05:20:31,874 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 06:21:08] 2026-01-10 05:20:31,878 | INFO     | sum of deviations: 32750373996.999973
[2026-01-10 06:21:08] 2026-01-10 05:20:31,878 | INFO     | mean x: 1768012082.0
[2026-01-10 06:21:08] 2026-01-10 05:20:31,878 | INFO     | mean y: 2487582.9164179103
[2026-01-10 06:21:08] 2026-01-10 05:20:31,878 | INFO     | intersect: -4964493627.811917
[2026-01-10 06:21:08] 2026-01-10 05:20:31,879 | INFO     | chi2: 3.8090507586806845
[2026-01-10 06:21:08] 2026-01-10 05:20:31,879 | INFO     | current chi2=3.8090507586806845 (change=55.706829758108064 %)
[2026-01-10 06:21:08] 2026-01-10 05:20:31,879 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 06:21:08] 2026-01-10 05:20:31,883 | INFO     | sum of deviations: -58310050029.49999
[2026-01-10 06:21:08] 2026-01-10 05:20:31,883 | INFO     | mean x: 1768012234.5
[2026-01-10 06:21:08] 2026-01-10 05:20:31,883 | INFO     | mean y: 2514559.2636363637
[2026-01-10 06:21:08] 2026-01-10 05:20:31,884 | INFO     | intersect: 9254020338.013521
[2026-01-10 06:21:08] 2026-01-10 05:20:31,884 | INFO     | chi2: 1.0760692434073702
[2026-01-10 06:21:08] 2026-01-10 05:20:31,884 | INFO     | current chi2=1.0760692434073702 (change=71.74967435246043 %)
[2026-01-10 06:21:08] 2026-01-10 05:20:31,885 | INFO     | sum of square deviations: 10644478650.0
[2026-01-10 06:21:08] 2026-01-10 05:20:31,888 | INFO     | sum of deviations: -71358662417.99998
[2026-01-10 06:21:08] 2026-01-10 05:20:31,889 | INFO     | mean x: 1768012387.0
[2026-01-10 06:21:08] 2026-01-10 05:20:31,889 | INFO     | mean y: 2518526.716923077
[2026-01-10 06:21:08] 2026-01-10 05:20:31,889 | INFO     | intersect: 11854954256.368685
[2026-01-10 06:21:08] 2026-01-10 05:20:31,890 | INFO     | chi2: 0.9801618955403907
[2026-01-10 06:21:08] 2026-01-10 05:20:31,890 | INFO     | current chi2=0.9801618955403907 (change=8.912748733835118 %)
[2026-01-10 06:21:08] 2026-01-10 05:20:31,890 | INFO     | left removable region: 30
[2026-01-10 06:21:08] 2026-01-10 05:20:31,890 | INFO     | sum of square deviations: 8711530780.0
[2026-01-10 06:21:08] 2026-01-10 05:20:31,893 | INFO     | sum of deviations: -18005167510.500004
[2026-01-10 06:21:08] 2026-01-10 05:20:31,894 | INFO     | mean x: 1768012661.5
[2026-01-10 06:21:08] 2026-01-10 05:20:31,894 | INFO     | mean y: 2515365.424342105
[2026-01-10 06:21:08] 2026-01-10 05:20:31,894 | INFO     | intersect: 3656679591.5412636
[2026-01-10 06:21:08] 2026-01-10 05:20:31,894 | INFO     | chi2: 0.12231162151088959
[2026-01-10 06:21:08] 2026-01-10 05:20:31,895 | INFO     | current memory leak: -2.07 B/s (using 304 data points, chi2=0.12)
[2026-01-10 06:21:08] 2026-01-10 05:20:31,895 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | ..............................
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | . Timing measurements:
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | . get job = 0 s
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | . initial setup = 5 s
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | . payload setup = 146 s
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | . stage-in = 0 s
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | . payload execution = 20899 s
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | . stage-out = 3 s
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | . log creation = 1 s
[2026-01-10 06:21:08] 2026-01-10 05:20:31,896 | INFO     | ..............................
[2026-01-10 06:21:08] 2026-01-10 05:20:32,093 | INFO     | 
[2026-01-10 06:21:08] 2026-01-10 05:20:32,093 | INFO     | job summary report
[2026-01-10 06:21:08] 2026-01-10 05:20:32,093 | INFO     | --------------------------------------------------
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | PanDA job id: 6963193703
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | task id: 47898826
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | errors: (none)
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | pilot state: finished 
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | transexitcode: 0
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | exeerrorcode: 0
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | exeerrordiag: 
[2026-01-10 06:21:08] 2026-01-10 05:20:32,094 | INFO     | exitcode: 0
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | exitmsg: OK
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | cpuconsumptiontime: 78385 s
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | nevents: 400
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | neventsw: 0
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | pid: 8488
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | pgrp: 8488
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | corecount: 8
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | event service: False
[2026-01-10 06:21:08] 2026-01-10 05:20:32,095 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 23: 2284081, 34: 2284109, 45: 2284265, 56: 2284293, 66: 2284321, 77: 2284349, 88: 2284405, 99: 2284713, 10
[2026-01-10 06:21:08] 2026-01-10 05:20:32,096 | INFO     | --------------------------------------------------
[2026-01-10 06:21:08] 2026-01-10 05:20:32,096 | INFO     | 
[2026-01-10 06:21:08] 2026-01-10 05:20:32,096 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 06:21:08] 2026-01-10 05:20:32,640 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,640 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,642 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:21:08] 2026-01-10 05:20:32,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,642 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:21:08] 2026-01-10 05:20:32,642 | INFO     | job 6963193703 has completed (purged errors)
[2026-01-10 06:21:08] 2026-01-10 05:20:32,642 | INFO     | overall cleanup function is called
[2026-01-10 06:21:08] 2026-01-10 05:20:33,651 | INFO     | --- collectZombieJob: --- 10, [8488]
[2026-01-10 06:21:08] 2026-01-10 05:20:33,651 | INFO     | zombie collector waiting for pid 8488
[2026-01-10 06:21:08] 2026-01-10 05:20:33,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:21:08] 2026-01-10 05:20:33,652 | INFO     | collected zombie processes
[2026-01-10 06:21:08] 2026-01-10 05:20:33,652 | INFO     | will attempt to kill all subprocesses of pid=8488
[2026-01-10 06:21:08] 2026-01-10 05:20:33,756 | INFO     | process IDs to be killed: [8488] (in reverse order)
[2026-01-10 06:21:08] 2026-01-10 05:20:34,824 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:21:08] 2026-01-10 05:20:34,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:21:08] 2026-01-10 05:20:34,826 | INFO     | did not find any defunct processes belonging to 8488
[2026-01-10 06:21:08] 2026-01-10 05:20:34,828 | INFO     | did not find any defunct processes belonging to 8488
[2026-01-10 06:21:08] 2026-01-10 05:20:34,829 | INFO     | ready for new job
[2026-01-10 06:21:08] 2026-01-10 05:20:34,829 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:21:08] 2026-01-10 05:20:34,832 | INFO     | ***************************************
[2026-01-10 06:21:08] 2026-01-10 05:20:34,832 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:21:08] 2026-01-10 05:20:34,832 | INFO     | ***************************************
[2026-01-10 06:21:08] 2026-01-10 05:20:34,832 | INFO     | 
[2026-01-10 06:21:08] 2026-01-10 05:20:34,833 | INFO     | pilot is running in a VM
[2026-01-10 06:21:08] 2026-01-10 05:20:34,833 | INFO     | architecture information:
[2026-01-10 06:21:08] 2026-01-10 05:20:34,847 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:21:08] 2026-01-10 05:20:35,007 | INFO     | cat /etc/os-release:
[2026-01-10 06:21:08] NAME="CentOS Linux"
[2026-01-10 06:21:08] VERSION="7 (Core)"
[2026-01-10 06:21:08] ID="centos"
[2026-01-10 06:21:08] ID_LIKE="rhel fedora"
[2026-01-10 06:21:08] VERSION_ID="7"
[2026-01-10 06:21:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:21:08] ANSI_COLOR="0;31"
[2026-01-10 06:21:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:21:08] HOME_URL="https://www.centos.org/"
[2026-01-10 06:21:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:21:08] 
[2026-01-10 06:21:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:21:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:21:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:21:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:21:08] 
[2026-01-10 06:21:08] 2026-01-10 05:20:35,007 | INFO     | ***************************************
[2026-01-10 06:21:08] 2026-01-10 05:20:35,511 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 06:21:08] 2026-01-10 05:20:35,796 | INFO     | sufficient remaining disk space (497246273536 B)
[2026-01-10 06:21:08] 2026-01-10 05:20:35,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:21:08] 2026-01-10 05:20:35,796 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:21:08] 2026-01-10 05:20:35,796 | INFO     | update_server=False
[2026-01-10 06:21:08] 2026-01-10 05:20:35,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:21:08] 2026-01-10 05:20:35,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:21:08] 2026-01-10 05:20:35,889 | INFO     | all payload control threads have been joined
[2026-01-10 06:21:08] 2026-01-10 05:20:36,153 | INFO     | all data control threads have been joined
[2026-01-10 06:21:08] 2026-01-10 05:20:36,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:21:08] 2026-01-10 05:20:36,521 | INFO     | aborting loop
[2026-01-10 06:21:08] 2026-01-10 05:20:36,689 | INFO     | all job control threads have been joined
[2026-01-10 06:21:08] 2026-01-10 05:20:36,802 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:36,895 | INFO     | [payload] control thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:21:08] 2026-01-10 05:20:37,159 | INFO     | [data] control thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,240 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,289 | INFO     | [job] validate thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,523 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,527 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,632 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,695 | INFO     | [job] control thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,729 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,805 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:37,863 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:38,001 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:38,022 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:38,043 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:38,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:21:08] 2026-01-10 05:20:42,798 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:21:08] 2026-01-10 05:20:48,149 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:21:08] 2026-01-10 05:20:48,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355589121856)>', '<ExcThread(monitor, started 140354992973568)>']
[2026-01-10 06:21:08] 2026-01-10 05:20:53,328 | INFO     | all workflow threads have been joined
[2026-01-10 06:21:08] 2026-01-10 05:20:53,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:21:08] 2026-01-10 05:20:53,329 | INFO     | traces error code: 0
[2026-01-10 06:21:08] 2026-01-10 05:20:53,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:21:08] 2026-01-10 05:21:04,261 | INFO     | PID=2032 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 06:21:08] 2026-01-10 05:21:04,261 | INFO     | .. there are 2 such processes running
[2026-01-10 06:21:08] 2026-01-10 05:21:04,262 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:21:08] 2026-01-10 05:21:04,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:21:08] 2026-01-10 05:21:04,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:21:08] 2026-01-10 05:21:04,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:21:08] 2026-01-10 05:21:04,262 | INFO     | [monitor] control thread has ended
[2026-01-10 06:21:08] 2026-01-10 05:21:04,571 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:21:08] 2026-01-10 05:21:04,685 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:21:08] 2026-01-10 05:21:04,795 [wrapper] pilotpid: 2032
[2026-01-10 06:21:08] 2026-01-10 05:21:04,900 [wrapper] Pilot exit status: 0
[2026-01-10 06:21:08] 2026-01-10 05:21:05,396 [wrapper] pandaids: 6963193703
[2026-01-10 06:21:08] 2026-01-10 05:21:06,449 [wrapper] cleanup supervisor_pilot  7699 2033
[2026-01-10 06:21:08] 2026-01-10 05:21:06,573 [wrapper] Test setup, not cleaning
[2026-01-10 06:21:08] 2026-01-10 05:21:06,659 [wrapper] apfmon messages muted
[2026-01-10 06:21:08] 2026-01-10 05:21:06,785 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:21:08] 2026-01-10 05:21:06,891 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:21:08]  *** Error codes and diagnostics ***
[2026-01-10 06:21:08]     "exeErrorCode": 0,
[2026-01-10 06:21:08]     "exeErrorDiag": "",
[2026-01-10 06:21:08]     "pilotErrorCode": 0,
[2026-01-10 06:21:08]     "pilotErrorDiag": "",
[2026-01-10 06:21:08]  *** Listing of results directory ***
[2026-01-10 06:21:08] total 439780
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 06:21:08] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc       100 Jan 10 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:21:08] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 00:19 run_atlas
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc       105 Jan 10 00:19 job.xml
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc      6389 Jan 10 00:19 init_data.xml
[2026-01-10 06:21:08] -rw-r--r--. 2 boinc boinc 223573478 Jan 10 00:19 EVNT.47898824._001506.pool.root.1
[2026-01-10 06:21:08] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:19 start_atlas.sh
[2026-01-10 06:21:08] drwxrwx--x. 2 boinc boinc        68 Jan 10 00:19 shared
[2026-01-10 06:21:08] -rw-r--r--. 2 boinc boinc    592395 Jan 10 00:19 input.tar.gz
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc         0 Jan 10 00:19 boinc_lockfile
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc      2519 Jan 10 00:19 pandaJob.out
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc    989374 Jan 10 00:24 agis_schedconf.cvmfs.json
[2026-01-10 06:21:08] drwx------. 5 boinc boinc      4096 Jan 10 00:24 pilot3
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc 216125383 Jan 10 06:17 HITS.47898826._039176.pool.root.1
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc       531 Jan 10 06:17 boinc_task_state.xml
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc      1012 Jan 10 06:18 memory_monitor_summary.json
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc   1516240 Jan 10 06:18 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc    532584 Jan 10 06:18 log.47898826._039176.job.log.tgz.1
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc        95 Jan 10 06:20 pilot_heartbeat.json
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc      7774 Jan 10 06:20 heartbeat.json
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc      8192 Jan 10 06:21 boinc_mmap_file
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc        28 Jan 10 06:21 wrapper_checkpoint.txt
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc       819 Jan 10 06:21 pilotlog.txt
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc   2837265 Jan 10 06:21 log.47898826._039176.job.log.1
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc       357 Jan 10 06:21 output.list
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc       620 Jan 10 06:21 runtime_log
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc   3389440 Jan 10 06:21 result.tar.gz
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc      8817 Jan 10 06:21 runtime_log.err
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc       657 Jan 10 06:21 5gGKDm5CJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmi1gKDm7Kv6qm.diag
[2026-01-10 06:21:08] -rw-r--r--. 1 boinc boinc     20777 Jan 10 06:21 stderr.txt
[2026-01-10 06:21:08] HITS file was successfully produced:
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc 216125383 Jan 10 06:17 shared/HITS.pool.root.1
[2026-01-10 06:21:08]  *** Contents of shared directory: ***
[2026-01-10 06:21:08] total 433304
[2026-01-10 06:21:08] -rw-r--r--. 2 boinc boinc 223573478 Jan 10 00:19 ATLAS.root_0
[2026-01-10 06:21:08] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:19 start_atlas.sh
[2026-01-10 06:21:08] -rw-r--r--. 2 boinc boinc    592395 Jan 10 00:19 input.tar.gz
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc 216125383 Jan 10 06:17 HITS.pool.root.1
[2026-01-10 06:21:08] -rw-------. 1 boinc boinc   3389440 Jan 10 06:21 result.tar.gz
06:21:10 (30695): run_atlas exited; CPU time 78593.023264
06:21:10 (30695): called boinc_finish(0)

</stderr_txt>
]]>


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