Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:22:09 (13498): wrapper (7.7.26015): starting
14:22:09 (13498): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 14:22:09] Arguments: --nthreads 12
[2026-01-09 14:22:09] Threads: 12
[2026-01-09 14:22:09] Checking for CVMFS
[2026-01-09 14:22:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:22:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:22:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:22:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:22:09] 2.11.2.0 2987 351409 93520 154955 2 1 17325479 20275201 1 130560 1 148371770 99.949 21558151 15817 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:22:09] CVMFS is ok
[2026-01-09 14:22:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:22:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:22:09] Further information can be found at the LHC@home message board.
[2026-01-09 14:22:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:22:09] Checking for apptainer binary...
[2026-01-09 14:22:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:22:09] Running /usr/bin/apptainer --version
[2026-01-09 14:22:09] apptainer version 1.3.2-1.el7
[2026-01-09 14:22:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:22:11] c-205-19.aglt2.org
[2026-01-09 14:22:11] apptainer works
[2026-01-09 14:22:11] Set ATHENA_PROC_NUMBER=12
[2026-01-09 14:22:11] Set ATHENA_CORE_NUMBER=12
[2026-01-09 14:22:11] Starting ATLAS job with PandaID=6963193681
[2026-01-09 14:22:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:59:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:59:41]  mtime=0
[2026-01-09 15:59:41]  protocol_id=None
[2026-01-09 15:59:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 15:59:41]  replicas=None
[2026-01-09 15:59:41]  scope=mc23_13p6TeV
[2026-01-09 15:59:41]  status=None
[2026-01-09 15:59:41]  status_code=0
[2026-01-09 15:59:41]  storage_token=
[2026-01-09 15:59:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963193681/log.47898826._039154.job.log.tgz.1
[2026-01-09 15:59:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/f4/log.47898826._039154.job.log.tgz.1
[2026-01-09 15:59:41]  workdir=None
[2026-01-09 15:59:41] ]
[2026-01-09 15:59:41] 2026-01-09 20:59:11,720 | INFO     | transferring file log.47898826._039154.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963193681/log.47898826._039154.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 15:59:41] 2026-01-09 20:59:11,720 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963193681/log.47898826._039154.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._039154.job
[2026-01-09 15:59:41] 2026-01-09 20:59:11,741 | INFO     | adding to output.list: log.47898826._039154.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/f4/log.47898826._039154.job.log.tg
[2026-01-09 15:59:41] 2026-01-09 20:59:11,742 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 15:59:41] 2026-01-09 20:59:11,742 | INFO     | summary of transferred files:
[2026-01-09 15:59:41] 2026-01-09 20:59:11,742 | INFO     |  -- lfn=log.47898826._039154.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 15:59:41] 2026-01-09 20:59:11,742 | INFO     | stage-out finished correctly
[2026-01-09 15:59:41] 2026-01-09 20:59:11,955 | INFO     | time since job start (5805s) is within the limit (349056.0s)
[2026-01-09 15:59:41] 2026-01-09 20:59:12,201 | INFO     | monitor loop #430: job 0:6963193681 is in state 'finished'
[2026-01-09 15:59:41] 2026-01-09 20:59:12,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:59:41] 2026-01-09 20:59:13,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 15:59:41] 2026-01-09 20:59:13,368 | INFO     | job 6963193681 has state=finished
[2026-01-09 15:59:41] 2026-01-09 20:59:13,368 | INFO     | preparing for final server update for job 6963193681 in state='finished'
[2026-01-09 15:59:41] 2026-01-09 20:59:13,369 | INFO     | this job has now completed (state=finished)
[2026-01-09 15:59:41] 2026-01-09 20:59:13,369 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 15:59:41] 2026-01-09 20:59:13,369 | INFO     | log transfer has been attempted: DONE
[2026-01-09 15:59:41] 2026-01-09 20:59:13,369 | INFO     | job 6963193681 has finished - writing final server update
[2026-01-09 15:59:41] 2026-01-09 20:59:13,370 | INFO     | total number of processed events: 400 (read)
[2026-01-09 15:59:41] 2026-01-09 20:59:13,371 | INFO     | executing command: lscpu
[2026-01-09 15:59:41] 2026-01-09 20:59:13,395 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 15:59:41] 2026-01-09 20:59:13,961 | INFO     | time since job start (5807s) is within the limit (349056.0s)
[2026-01-09 15:59:41] 2026-01-09 20:59:14,704 | INFO     | monitor loop #431: job 0:6963193681 is in state 'finished'
[2026-01-09 15:59:41] 2026-01-09 20:59:14,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:59:41] 2026-01-09 20:59:15,967 | INFO     | time since job start (5809s) is within the limit (349056.0s)
[2026-01-09 15:59:41] 2026-01-09 20:59:17,208 | INFO     | monitor loop #432: job 0:6963193681 is in state 'finished'
[2026-01-09 15:59:41] 2026-01-09 20:59:17,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:59:41] 2026-01-09 20:59:17,972 | INFO     | time since job start (5811s) is within the limit (349056.0s)
[2026-01-09 15:59:41] 2026-01-09 20:59:18,137 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 15:59:41] 2026-01-09 20:59:18,141 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2026-01-09 15:59:41] 2026-01-09 20:59:18,144 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963193681/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:59:41] 2026-01-09 20:59:18,145 | INFO     | extracted standard info from prmon json
[2026-01-09 15:59:41] 2026-01-09 20:59:18,145 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:59:41] 2026-01-09 20:59:18,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:59:41] 2026-01-09 20:59:18,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:59:41] 2026-01-09 20:59:18,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:59:41] 2026-01-09 20:59:18,148 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:59:41] 2026-01-09 20:59:18,148 | INFO     | sum of square deviations: 211285822.0
[2026-01-09 15:59:41] 2026-01-09 20:59:18,148 | INFO     | sum of deviations: -15251169156.5
[2026-01-09 15:59:41] 2026-01-09 20:59:18,149 | INFO     | mean x: 1767989533.5
[2026-01-09 15:59:41] 2026-01-09 20:59:18,149 | INFO     | mean y: 2825510.5568181816
[2026-01-09 15:59:41] 2026-01-09 20:59:18,149 | INFO     | intersect: 127620983639.17003
[2026-01-09 15:59:41] 2026-01-09 20:59:18,149 | INFO     | chi2: 0.07180047248868798
[2026-01-09 15:59:41] 2026-01-09 20:59:18,149 | INFO     | current memory leak: -72.18 B/s (using 88 data points, chi2=0.07)
[2026-01-09 15:59:41] 2026-01-09 20:59:18,149 | INFO     | could have reported an average CPU frequency of 2139 MHz (7 samples)
[2026-01-09 15:59:41] 2026-01-09 20:59:18,150 | INFO     | ..............................
[2026-01-09 15:59:41] 2026-01-09 20:59:18,150 | INFO     | . Timing measurements:
[2026-01-09 15:59:41] 2026-01-09 20:59:18,150 | INFO     | . get job = 0 s
[2026-01-09 15:59:41] 2026-01-09 20:59:18,150 | INFO     | . initial setup = 2 s
[2026-01-09 15:59:41] 2026-01-09 20:59:18,150 | INFO     | . payload setup = 7 s
[2026-01-09 15:59:41] 2026-01-09 20:59:18,150 | INFO     | . stage-in = 0 s
[2026-01-09 15:59:41] 2026-01-09 20:59:18,150 | INFO     | . payload execution = 5777 s
[2026-01-09 15:59:41] 2026-01-09 20:59:18,150 | INFO     | . stage-out = 0 s
[2026-01-09 15:59:41] 2026-01-09 20:59:18,151 | INFO     | . log creation = 0 s
[2026-01-09 15:59:41] 2026-01-09 20:59:18,151 | INFO     | ..............................
[2026-01-09 15:59:41] 2026-01-09 20:59:18,233 | INFO     | 
[2026-01-09 15:59:41] 2026-01-09 20:59:18,233 | INFO     | job summary report
[2026-01-09 15:59:41] 2026-01-09 20:59:18,233 | INFO     | --------------------------------------------------
[2026-01-09 15:59:41] 2026-01-09 20:59:18,233 | INFO     | PanDA job id: 6963193681
[2026-01-09 15:59:41] 2026-01-09 20:59:18,233 | INFO     | task id: 47898826
[2026-01-09 15:59:41] 2026-01-09 20:59:18,234 | INFO     | errors: (none)
[2026-01-09 15:59:41] 2026-01-09 20:59:18,234 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:59:41] 2026-01-09 20:59:18,234 | INFO     | pilot state: finished 
[2026-01-09 15:59:41] 2026-01-09 20:59:18,234 | INFO     | transexitcode: 0
[2026-01-09 15:59:41] 2026-01-09 20:59:18,234 | INFO     | exeerrorcode: 0
[2026-01-09 15:59:41] 2026-01-09 20:59:18,234 | INFO     | exeerrordiag: 
[2026-01-09 15:59:41] 2026-01-09 20:59:18,234 | INFO     | exitcode: 0
[2026-01-09 15:59:41] 2026-01-09 20:59:18,235 | INFO     | exitmsg: OK
[2026-01-09 15:59:41] 2026-01-09 20:59:18,235 | INFO     | cpuconsumptiontime: 64728 s
[2026-01-09 15:59:41] 2026-01-09 20:59:18,235 | INFO     | nevents: 400
[2026-01-09 15:59:41] 2026-01-09 20:59:18,235 | INFO     | neventsw: 0
[2026-01-09 15:59:41] 2026-01-09 20:59:18,235 | INFO     | pid: 23562
[2026-01-09 15:59:41] 2026-01-09 20:59:18,235 | INFO     | pgrp: 23562
[2026-01-09 15:59:41] 2026-01-09 20:59:18,236 | INFO     | corecount: 12
[2026-01-09 15:59:41] 2026-01-09 20:59:18,236 | INFO     | event service: False
[2026-01-09 15:59:41] 2026-01-09 20:59:18,236 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 5788: 2310929, 5789: 2319927, 5790: 2319983, 5795: 2320305}
[2026-01-09 15:59:41] 2026-01-09 20:59:18,236 | INFO     | --------------------------------------------------
[2026-01-09 15:59:41] 2026-01-09 20:59:18,236 | INFO     | 
[2026-01-09 15:59:41] 2026-01-09 20:59:18,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 15:59:41] 2026-01-09 20:59:18,258 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,258 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,259 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,259 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,261 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:59:41] 2026-01-09 20:59:18,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,261 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:59:41] 2026-01-09 20:59:18,262 | INFO     | job 6963193681 has completed (purged errors)
[2026-01-09 15:59:41] 2026-01-09 20:59:18,262 | INFO     | overall cleanup function is called
[2026-01-09 15:59:41] 2026-01-09 20:59:19,270 | INFO     | --- collectZombieJob: --- 10, [23562]
[2026-01-09 15:59:41] 2026-01-09 20:59:19,270 | INFO     | zombie collector waiting for pid 23562
[2026-01-09 15:59:41] 2026-01-09 20:59:19,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:59:41] 2026-01-09 20:59:19,270 | INFO     | collected zombie processes
[2026-01-09 15:59:41] 2026-01-09 20:59:19,271 | INFO     | will attempt to kill all subprocesses of pid=23562
[2026-01-09 15:59:41] 2026-01-09 20:59:19,358 | INFO     | process IDs to be killed: [23562] (in reverse order)
[2026-01-09 15:59:41] 2026-01-09 20:59:19,406 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:59:41] 2026-01-09 20:59:19,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:59:41] 2026-01-09 20:59:19,408 | INFO     | did not find any defunct processes belonging to 23562
[2026-01-09 15:59:41] 2026-01-09 20:59:19,411 | INFO     | did not find any defunct processes belonging to 23562
[2026-01-09 15:59:41] 2026-01-09 20:59:19,411 | INFO     | ready for new job
[2026-01-09 15:59:41] 2026-01-09 20:59:19,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:59:41] 2026-01-09 20:59:19,412 | INFO     | ***************************************
[2026-01-09 15:59:41] 2026-01-09 20:59:19,412 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:59:41] 2026-01-09 20:59:19,413 | INFO     | ***************************************
[2026-01-09 15:59:41] 2026-01-09 20:59:19,413 | INFO     | 
[2026-01-09 15:59:41] 2026-01-09 20:59:19,413 | INFO     | architecture information:
[2026-01-09 15:59:41] 2026-01-09 20:59:19,414 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:59:41] 2026-01-09 20:59:19,429 | INFO     | cat /etc/os-release:
[2026-01-09 15:59:41] NAME="CentOS Linux"
[2026-01-09 15:59:41] VERSION="7 (Core)"
[2026-01-09 15:59:41] ID="centos"
[2026-01-09 15:59:41] ID_LIKE="rhel fedora"
[2026-01-09 15:59:41] VERSION_ID="7"
[2026-01-09 15:59:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:59:41] ANSI_COLOR="0;31"
[2026-01-09 15:59:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:59:41] HOME_URL="https://www.centos.org/"
[2026-01-09 15:59:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:59:41] 
[2026-01-09 15:59:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:59:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:59:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:59:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:59:41] 
[2026-01-09 15:59:41] 2026-01-09 20:59:19,429 | INFO     | ***************************************
[2026-01-09 15:59:41] 2026-01-09 20:59:19,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 15:59:41] 2026-01-09 20:59:19,949 | INFO     | sufficient remaining disk space (29318184960 B)
[2026-01-09 15:59:41] 2026-01-09 20:59:19,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:59:41] 2026-01-09 20:59:19,949 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:59:41] 2026-01-09 20:59:19,949 | INFO     | update_server=False
[2026-01-09 15:59:41] 2026-01-09 20:59:19,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:59:41] 2026-01-09 20:59:19,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:59:41] 2026-01-09 20:59:19,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:59:41] 2026-01-09 20:59:19,950 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 15:59:41] 2026-01-09 20:59:19,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:59:41] 2026-01-09 20:59:19,951 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:59:41] 2026-01-09 20:59:19,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:59:41] 2026-01-09 20:59:19,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:59:41] 2026-01-09 20:59:20,522 | INFO     | all data control threads have been joined
[2026-01-09 15:59:41] 2026-01-09 20:59:20,532 | INFO     | all payload control threads have been joined
[2026-01-09 15:59:41] 2026-01-09 20:59:20,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:59:41] 2026-01-09 20:59:20,720 | INFO     | aborting loop
[2026-01-09 15:59:41] 2026-01-09 20:59:20,809 | INFO     | all job control threads have been joined
[2026-01-09 15:59:41] 2026-01-09 20:59:20,955 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:20,957 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,072 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,450 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,527 | INFO     | [data] control thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,538 | INFO     | [payload] control thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,590 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,686 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,725 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,815 | INFO     | [job] control thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:21,956 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:22,306 | INFO     | [job] validate thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:22,319 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:22,407 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:22,487 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:23,956 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:59:41] 2026-01-09 20:59:35,212 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:59:41] 2026-01-09 20:59:35,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307021637440)>', '<ExcThread(monitor, started 140306794649344)>']
[2026-01-09 15:59:41] 2026-01-09 20:59:36,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:59:41] 2026-01-09 20:59:36,028 | INFO     | [monitor] control thread has ended
[2026-01-09 15:59:41] 2026-01-09 20:59:40,697 | INFO     | all workflow threads have been joined
[2026-01-09 15:59:41] 2026-01-09 20:59:40,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:59:41] 2026-01-09 20:59:40,697 | INFO     | traces error code: 0
[2026-01-09 15:59:41] 2026-01-09 20:59:40,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:59:41] 2026-01-09 20:59:40,790 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:59:41] 2026-01-09 20:59:40,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:59:41] 2026-01-09 20:59:40,797 [wrapper] pilotpid: 17190
[2026-01-09 15:59:41] 2026-01-09 20:59:40,800 [wrapper] Pilot exit status: 0
[2026-01-09 15:59:41] 2026-01-09 20:59:40,817 [wrapper] pandaids: 6963193681
[2026-01-09 15:59:41] 2026-01-09 20:59:40,859 [wrapper] cleanup supervisor_pilot 22965 17191
[2026-01-09 15:59:41] 2026-01-09 20:59:40,864 [wrapper] Test setup, not cleaning
[2026-01-09 15:59:41] 2026-01-09 20:59:40,867 [wrapper] apfmon messages muted
[2026-01-09 15:59:41] 2026-01-09 20:59:40,871 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:59:41] 2026-01-09 20:59:40,875 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:59:41]  *** Error codes and diagnostics ***
[2026-01-09 15:59:41]     "exeErrorCode": 0,
[2026-01-09 15:59:41]     "exeErrorDiag": "",
[2026-01-09 15:59:41]     "pilotErrorCode": 0,
[2026-01-09 15:59:41]     "pilotErrorDiag": "",
[2026-01-09 15:59:41]  *** Listing of results directory ***
[2026-01-09 15:59:41] total 433720
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 15:59:41] -rwx------ 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas       100 Jan  9 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:59:41] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 14:22 run_atlas
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas       105 Jan  9 14:22 job.xml
[2026-01-09 15:59:41] -rw-r--r-- 2 boincer umatlas 226702420 Jan  9 14:22 EVNT.47898824._001505.pool.root.1
[2026-01-09 15:59:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:22 start_atlas.sh
[2026-01-09 15:59:41] drwxrwx--x 2 boincer umatlas      4096 Jan  9 14:22 shared
[2026-01-09 15:59:41] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 14:22 input.tar.gz
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas         0 Jan  9 14:22 boinc_lockfile
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 14:22 pandaJob.out
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas        57 Jan  9 14:22 setup.sh.local
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas    989364 Jan  9 14:22 agis_schedconf.cvmfs.json
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas   1516240 Jan  9 14:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:59:41] drwx------ 5 boincer umatlas      4096 Jan  9 14:22 pilot3
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 15:55 init_data.xml
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas       529 Jan  9 15:58 boinc_task_state.xml
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas 211065998 Jan  9 15:58 HITS.47898826._039154.pool.root.1
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas        95 Jan  9 15:58 pilot_heartbeat.json
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas      1048 Jan  9 15:59 memory_monitor_summary.json
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas    393687 Jan  9 15:59 log.47898826._039154.job.log.tgz.1
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas      7852 Jan  9 15:59 heartbeat.json
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas      4552 Jan  9 15:59 pilotlog.txt
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas        27 Jan  9 15:59 wrapper_checkpoint.txt
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 15:59 boinc_mmap_file
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas    827454 Jan  9 15:59 log.47898826._039154.job.log.1
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas       357 Jan  9 15:59 output.list
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas       620 Jan  9 15:59 runtime_log
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas   1239040 Jan  9 15:59 result.tar.gz
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 15:59 runtime_log.err
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas       659 Jan  9 15:59 mBuNDm4CJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmV1gKDmXxFsGn.diag
[2026-01-09 15:59:41] -rw-r--r-- 1 boincer umatlas     21684 Jan  9 15:59 stderr.txt
[2026-01-09 15:59:41] HITS file was successfully produced:
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas 211065998 Jan  9 15:58 shared/HITS.pool.root.1
[2026-01-09 15:59:41]  *** Contents of shared directory: ***
[2026-01-09 15:59:41] total 429324
[2026-01-09 15:59:41] -rw-r--r-- 2 boincer umatlas 226702420 Jan  9 14:22 ATLAS.root_0
[2026-01-09 15:59:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:22 start_atlas.sh
[2026-01-09 15:59:41] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 14:22 input.tar.gz
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas 211065998 Jan  9 15:58 HITS.pool.root.1
[2026-01-09 15:59:41] -rw------- 1 boincer umatlas   1239040 Jan  9 15:59 result.tar.gz
15:59:42 (13498): run_atlas exited; CPU time 64709.382739
15:59:42 (13498): called boinc_finish(0)

</stderr_txt>
]]>

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