Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:58:11 (11711): wrapper (7.7.26015): starting
23:58:11 (11711): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 23:58:11] Arguments: --nthreads 8
[2026-01-09 23:58:11] Threads: 8
[2026-01-09 23:58:11] Checking for CVMFS
[2026-01-09 23:58:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:58:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:58:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:58:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:58:14] 2.11.2.0 21950 36044 122496 154959 2 62 23730102 25165825 899 130560 0 17390804 99.834 9998141 2960 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 23:58:14] CVMFS is ok
[2026-01-09 23:58:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:58:14] Checking for apptainer binary...
[2026-01-09 23:58:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 23:58:14] Running /usr/bin/apptainer --version
[2026-01-09 23:58:14] apptainer version 1.3.2-1.el7
[2026-01-09 23:58:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:58:20] cg-vwn481.simple-grid.lan
[2026-01-09 23:58:20] apptainer works
[2026-01-09 23:58:20] Set ATHENA_PROC_NUMBER=8
[2026-01-09 23:58:20] Set ATHENA_CORE_NUMBER=8
[2026-01-09 23:58:20] Starting ATLAS job with PandaID=6963589034
[2026-01-09 23:58:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:01:34]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:01:34] 2026-01-10 05:00:39,982 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:01:34] 2026-01-10 05:00:39,983 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-10 06:01:34] 2026-01-10 05:00:39,985 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963589034/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:01:34] 2026-01-10 05:00:39,986 | INFO     | extracted standard info from prmon json
[2026-01-10 06:01:34] 2026-01-10 05:00:39,986 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:01:34] 2026-01-10 05:00:39,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:01:34] 2026-01-10 05:00:39,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 06:01:34] 2026-01-10 05:00:39,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 06:01:34] 2026-01-10 05:00:39,993 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:01:34] 2026-01-10 05:00:39,994 | INFO     | sum of square deviations: 12403750705.5
[2026-01-10 06:01:34] 2026-01-10 05:00:40,015 | INFO     | sum of deviations: 119719281797.00006
[2026-01-10 06:01:34] 2026-01-10 05:00:40,016 | INFO     | mean x: 1768010715.5
[2026-01-10 06:01:34] 2026-01-10 05:00:40,016 | INFO     | mean y: 2458039.4795321636
[2026-01-10 06:01:34] 2026-01-10 05:00:40,016 | INFO     | intersect: -17062136218.707626
[2026-01-10 06:01:34] 2026-01-10 05:00:40,017 | INFO     | chi2: 9.44464492795498
[2026-01-10 06:01:34] 2026-01-10 05:00:40,017 | INFO     | sum of square deviations: 11867638328.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,021 | INFO     | sum of deviations: 164269016700.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,021 | INFO     | mean x: 1768010563.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,021 | INFO     | mean y: 2470595.278931751
[2026-01-10 06:01:34] 2026-01-10 05:00:40,021 | INFO     | intersect: -24469909559.245728
[2026-01-10 06:01:34] 2026-01-10 05:00:40,022 | INFO     | chi2: 7.9279001376202975
[2026-01-10 06:01:34] 2026-01-10 05:00:40,022 | INFO     | current chi2=7.9279001376202975 (change=16.05930981952859 %)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,022 | INFO     | right removable region: 336
[2026-01-10 06:01:34] 2026-01-10 05:00:40,022 | INFO     | sum of square deviations: 11867638328.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,026 | INFO     | sum of deviations: -110175699.00000763
[2026-01-10 06:01:34] 2026-01-10 05:00:40,026 | INFO     | mean x: 1768010868.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,026 | INFO     | mean y: 2492109.5489614243
[2026-01-10 06:01:34] 2026-01-10 05:00:40,026 | INFO     | intersect: 18905807.694946095
[2026-01-10 06:01:34] 2026-01-10 05:00:40,027 | INFO     | chi2: 4.6032351893943435
[2026-01-10 06:01:34] 2026-01-10 05:00:40,027 | INFO     | current chi2=4.6032351893943435 (change=51.260897317914655 %)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,028 | INFO     | sum of square deviations: 11347200663.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,031 | INFO     | sum of deviations: -89249520625.49998
[2026-01-10 06:01:34] 2026-01-10 05:00:40,031 | INFO     | mean x: 1768011020.5
[2026-01-10 06:01:34] 2026-01-10 05:00:40,031 | INFO     | mean y: 2518193.0391566264
[2026-01-10 06:01:34] 2026-01-10 05:00:40,031 | INFO     | intersect: 13908514987.010368
[2026-01-10 06:01:34] 2026-01-10 05:00:40,032 | INFO     | chi2: 2.007629945599683
[2026-01-10 06:01:34] 2026-01-10 05:00:40,032 | INFO     | current chi2=2.007629945599683 (change=56.38654418038044 %)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,032 | INFO     | sum of square deviations: 10842205148.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,036 | INFO     | sum of deviations: -102386999278.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,036 | INFO     | mean x: 1768011173.0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,036 | INFO     | mean y: 2522140.737003058
[2026-01-10 06:01:34] 2026-01-10 05:00:40,036 | INFO     | intersect: 16698513059.78348
[2026-01-10 06:01:34] 2026-01-10 05:00:40,043 | INFO     | chi2: 1.9069426946542405
[2026-01-10 06:01:34] 2026-01-10 05:00:40,043 | INFO     | current chi2=1.9069426946542405 (change=5.015229582828678 %)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,043 | INFO     | left removable region: 30
[2026-01-10 06:01:34] 2026-01-10 05:00:40,044 | INFO     | sum of square deviations: 8884603792.5
[2026-01-10 06:01:34] 2026-01-10 05:00:40,047 | INFO     | sum of deviations: -48282324750.49999
[2026-01-10 06:01:34] 2026-01-10 05:00:40,047 | INFO     | mean x: 1768011447.5
[2026-01-10 06:01:34] 2026-01-10 05:00:40,047 | INFO     | mean y: 2533437.382352941
[2026-01-10 06:01:34] 2026-01-10 05:00:40,047 | INFO     | intersect: 9610581794.34532
[2026-01-10 06:01:34] 2026-01-10 05:00:40,048 | INFO     | chi2: 0.20470340905613327
[2026-01-10 06:01:34] 2026-01-10 05:00:40,048 | INFO     | current memory leak: -5.43 B/s (using 306 data points, chi2=0.20)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,048 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | ..............................
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | . Timing measurements:
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | . get job = 0 s
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | . initial setup = 11 s
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | . payload setup = 159 s
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | . stage-in = 0 s
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | . payload execution = 20972 s
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | . stage-out = 3 s
[2026-01-10 06:01:34] 2026-01-10 05:00:40,049 | INFO     | . log creation = 1 s
[2026-01-10 06:01:34] 2026-01-10 05:00:40,050 | INFO     | ..............................
[2026-01-10 06:01:34] 2026-01-10 05:00:40,179 | INFO     | 
[2026-01-10 06:01:34] 2026-01-10 05:00:40,179 | INFO     | job summary report
[2026-01-10 06:01:34] 2026-01-10 05:00:40,179 | INFO     | --------------------------------------------------
[2026-01-10 06:01:34] 2026-01-10 05:00:40,179 | INFO     | PanDA job id: 6963589034
[2026-01-10 06:01:34] 2026-01-10 05:00:40,179 | INFO     | task id: 47898826
[2026-01-10 06:01:34] 2026-01-10 05:00:40,179 | INFO     | errors: (none)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,179 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | pilot state: finished 
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | transexitcode: 0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | exeerrorcode: 0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | exeerrordiag: 
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | exitcode: 0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | exitmsg: OK
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | cpuconsumptiontime: 77979 s
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | nevents: 400
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | neventsw: 0
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | pid: 21928
[2026-01-10 06:01:34] 2026-01-10 05:00:40,180 | INFO     | pgrp: 21928
[2026-01-10 06:01:34] 2026-01-10 05:00:40,181 | INFO     | corecount: 8
[2026-01-10 06:01:34] 2026-01-10 05:00:40,181 | INFO     | event service: False
[2026-01-10 06:01:34] 2026-01-10 05:00:40,181 | INFO     | sizes: {0: 2283689, 1: 2283944, 2: 2283944, 12: 2283972, 23: 2284000, 34: 2284028, 44: 2284184, 55: 2284212, 66: 2284240, 77: 2284268, 87: 2284324, 98: 2284632, 10
[2026-01-10 06:01:34] 2026-01-10 05:00:40,181 | INFO     | --------------------------------------------------
[2026-01-10 06:01:34] 2026-01-10 05:00:40,181 | INFO     | 
[2026-01-10 06:01:34] 2026-01-10 05:00:40,181 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-10 06:01:34] 2026-01-10 05:00:40,323 | INFO     | time since job start (21474s) is within the limit (349056.0s)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,663 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,663 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,663 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:01:34] 2026-01-10 05:00:40,665 | INFO     | job 6963589034 has completed (purged errors)
[2026-01-10 06:01:34] 2026-01-10 05:00:40,666 | INFO     | overall cleanup function is called
[2026-01-10 06:01:34] 2026-01-10 05:00:41,675 | INFO     | --- collectZombieJob: --- 10, [21928]
[2026-01-10 06:01:34] 2026-01-10 05:00:41,675 | INFO     | zombie collector waiting for pid 21928
[2026-01-10 06:01:34] 2026-01-10 05:00:41,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:01:34] 2026-01-10 05:00:41,675 | INFO     | collected zombie processes
[2026-01-10 06:01:34] 2026-01-10 05:00:41,675 | INFO     | will attempt to kill all subprocesses of pid=21928
[2026-01-10 06:01:34] 2026-01-10 05:00:41,747 | INFO     | process IDs to be killed: [21928] (in reverse order)
[2026-01-10 06:01:34] 2026-01-10 05:00:42,774 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:01:34] 2026-01-10 05:00:42,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:01:34] 2026-01-10 05:00:42,777 | INFO     | did not find any defunct processes belonging to 21928
[2026-01-10 06:01:34] 2026-01-10 05:00:42,779 | INFO     | did not find any defunct processes belonging to 21928
[2026-01-10 06:01:34] 2026-01-10 05:00:42,779 | INFO     | ready for new job
[2026-01-10 06:01:34] 2026-01-10 05:00:42,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:01:34] 2026-01-10 05:00:42,781 | INFO     | ***************************************
[2026-01-10 06:01:34] 2026-01-10 05:00:42,782 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:01:34] 2026-01-10 05:00:42,782 | INFO     | ***************************************
[2026-01-10 06:01:34] 2026-01-10 05:00:42,782 | INFO     | 
[2026-01-10 06:01:34] 2026-01-10 05:00:42,783 | INFO     | pilot is running in a VM
[2026-01-10 06:01:34] 2026-01-10 05:00:42,783 | INFO     | architecture information:
[2026-01-10 06:01:34] 2026-01-10 05:00:42,804 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:01:34] 2026-01-10 05:00:43,107 | INFO     | cat /etc/os-release:
[2026-01-10 06:01:34] NAME="CentOS Linux"
[2026-01-10 06:01:34] VERSION="7 (Core)"
[2026-01-10 06:01:34] ID="centos"
[2026-01-10 06:01:34] ID_LIKE="rhel fedora"
[2026-01-10 06:01:34] VERSION_ID="7"
[2026-01-10 06:01:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:01:34] ANSI_COLOR="0;31"
[2026-01-10 06:01:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:01:34] HOME_URL="https://www.centos.org/"
[2026-01-10 06:01:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:01:34] 
[2026-01-10 06:01:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:01:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:01:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:01:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:01:34] 
[2026-01-10 06:01:34] 2026-01-10 05:00:43,107 | INFO     | ***************************************
[2026-01-10 06:01:34] 2026-01-10 05:00:43,610 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-10 06:01:34] 2026-01-10 05:00:43,824 | INFO     | sufficient remaining disk space (496817405952 B)
[2026-01-10 06:01:34] 2026-01-10 05:00:43,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:01:34] 2026-01-10 05:00:43,825 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:01:34] 2026-01-10 05:00:43,825 | INFO     | update_server=False
[2026-01-10 06:01:34] 2026-01-10 05:00:43,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:01:34] 2026-01-10 05:00:43,908 | INFO     | all job control threads have been joined
[2026-01-10 06:01:34] 2026-01-10 05:00:44,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:01:34] 2026-01-10 05:00:44,005 | INFO     | aborting loop
[2026-01-10 06:01:34] 2026-01-10 05:00:44,017 | INFO     | all data control threads have been joined
[2026-01-10 06:01:34] 2026-01-10 05:00:44,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:01:34] 2026-01-10 05:00:44,831 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:44,905 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:44,914 | INFO     | [job] control thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:44,937 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:44,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:01:34] 2026-01-10 05:00:44,955 | INFO     | [job] validate thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:45,011 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:45,023 | INFO     | [data] control thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:45,110 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:45,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:01:34] 2026-01-10 05:00:45,287 | INFO     | all payload control threads have been joined
[2026-01-10 06:01:34] 2026-01-10 05:00:45,392 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:45,708 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:45,831 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:46,051 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:46,204 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:46,293 | INFO     | [payload] control thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:46,495 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:00:48,959 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:01:34] 2026-01-10 05:01:13,437 | INFO     | PID=15457 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:01:34] 2026-01-10 05:01:13,437 | INFO     | .. there are 2 such processes running
[2026-01-10 06:01:34] 2026-01-10 05:01:13,437 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:01:34] 2026-01-10 05:01:13,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:01:34] 2026-01-10 05:01:13,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:01:34] 2026-01-10 05:01:22,964 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:01:34] 2026-01-10 05:01:24,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667156105024)>', '<ExcThread(monitor, started 139666850289408)>']
[2026-01-10 06:01:34] 2026-01-10 05:01:24,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:01:34] 2026-01-10 05:01:24,503 | INFO     | [monitor] control thread has ended
[2026-01-10 06:01:34] 2026-01-10 05:01:29,512 | INFO     | all workflow threads have been joined
[2026-01-10 06:01:34] 2026-01-10 05:01:29,512 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:01:34] 2026-01-10 05:01:29,512 | INFO     | traces error code: 0
[2026-01-10 06:01:34] 2026-01-10 05:01:29,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:01:34] 2026-01-10 05:01:29,924 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:01:34] 2026-01-10 05:01:30,001 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:01:34] 2026-01-10 05:01:30,098 [wrapper] pilotpid: 15457
[2026-01-10 06:01:34] 2026-01-10 05:01:30,222 [wrapper] Pilot exit status: 0
[2026-01-10 06:01:34] 2026-01-10 05:01:30,737 [wrapper] pandaids: 6963589034
[2026-01-10 06:01:34] 2026-01-10 05:01:31,710 [wrapper] cleanup supervisor_pilot 21037 15458
[2026-01-10 06:01:34] 2026-01-10 05:01:31,845 [wrapper] Test setup, not cleaning
[2026-01-10 06:01:34] 2026-01-10 05:01:31,944 [wrapper] apfmon messages muted
[2026-01-10 06:01:34] 2026-01-10 05:01:32,069 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:01:34] 2026-01-10 05:01:32,133 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:01:34]  *** Error codes and diagnostics ***
[2026-01-10 06:01:34]     "exeErrorCode": 0,
[2026-01-10 06:01:34]     "exeErrorDiag": "",
[2026-01-10 06:01:34]     "pilotErrorCode": 0,
[2026-01-10 06:01:34]     "pilotErrorDiag": "",
[2026-01-10 06:01:34]  *** Listing of results directory ***
[2026-01-10 06:01:34] total 454192
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 06:01:34] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:26 queuedata.json
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc       100 Jan  9 23:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:01:34] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 23:58 run_atlas
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc       105 Jan  9 23:58 job.xml
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc      6392 Jan  9 23:58 init_data.xml
[2026-01-10 06:01:34] -rw-r--r--. 2 boinc boinc 226529681 Jan  9 23:58 EVNT.47898824._000373.pool.root.1
[2026-01-10 06:01:34] -rw-r--r--. 2 boinc boinc     15847 Jan  9 23:58 start_atlas.sh
[2026-01-10 06:01:34] drwxrwx--x. 2 boinc boinc        68 Jan  9 23:58 shared
[2026-01-10 06:01:34] -rw-r--r--. 2 boinc boinc    592402 Jan  9 23:58 input.tar.gz
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc         0 Jan  9 23:58 boinc_lockfile
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc      2517 Jan  9 23:58 pandaJob.out
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc    989375 Jan 10 00:02 agis_schedconf.cvmfs.json
[2026-01-10 06:01:34] drwx------. 5 boinc boinc      4096 Jan 10 00:02 pilot3
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc 227861775 Jan 10 05:57 HITS.47898826._039677.pool.root.1
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc       531 Jan 10 05:57 boinc_task_state.xml
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc      1011 Jan 10 05:58 memory_monitor_summary.json
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc   1516240 Jan 10 05:58 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc    536570 Jan 10 05:58 log.47898826._039677.job.log.tgz.1
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc        95 Jan 10 06:00 pilot_heartbeat.json
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc      7773 Jan 10 06:00 heartbeat.json
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc      8192 Jan 10 06:01 boinc_mmap_file
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc        28 Jan 10 06:01 wrapper_checkpoint.txt
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc      4885 Jan 10 06:01 pilotlog.txt
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc   2863338 Jan 10 06:01 log.47898826._039677.job.log.1
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc       357 Jan 10 06:01 output.list
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc       620 Jan 10 06:01 runtime_log
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc   3420160 Jan 10 06:01 result.tar.gz
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc       657 Jan 10 06:01 TnXMDmHDJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVGmKDm6dnIfm.diag
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc      8833 Jan 10 06:01 runtime_log.err
[2026-01-10 06:01:34] -rw-r--r--. 1 boinc boinc     20785 Jan 10 06:01 stderr.txt
[2026-01-10 06:01:34] HITS file was successfully produced:
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc 227861775 Jan 10 05:57 shared/HITS.pool.root.1
[2026-01-10 06:01:34]  *** Contents of shared directory: ***
[2026-01-10 06:01:34] total 447684
[2026-01-10 06:01:34] -rw-r--r--. 2 boinc boinc 226529681 Jan  9 23:58 ATLAS.root_0
[2026-01-10 06:01:34] -rw-r--r--. 2 boinc boinc     15847 Jan  9 23:58 start_atlas.sh
[2026-01-10 06:01:34] -rw-r--r--. 2 boinc boinc    592402 Jan  9 23:58 input.tar.gz
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc 227861775 Jan 10 05:57 HITS.pool.root.1
[2026-01-10 06:01:34] -rw-------. 1 boinc boinc   3420160 Jan 10 06:01 result.tar.gz
06:01:36 (11711): run_atlas exited; CPU time 78180.570455
06:01:36 (11711): called boinc_finish(0)

</stderr_txt>
]]>

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