Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:39:49 (28359): wrapper (7.7.26015): starting
00:39:49 (28359): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 00:39:49] Arguments: --nthreads 8
[2026-01-10 00:39:49] Threads: 8
[2026-01-10 00:39:49] Checking for CVMFS
[2026-01-10 00:39:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:39:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:39:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:39:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:39:52] 2.11.2.0 29086 36086 99916 154961 0 61 17071106 25165825 96 130560 0 14906746 99.804 10290616 2855 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 00:39:52] CVMFS is ok
[2026-01-10 00:39:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:39:52] Checking for apptainer binary...
[2026-01-10 00:39:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:39:52] Running /usr/bin/apptainer --version
[2026-01-10 00:39:52] apptainer version 1.3.2-1.el7
[2026-01-10 00:39:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:40:14] cg-vwn413.simple-grid.lan
[2026-01-10 00:40:14] apptainer works
[2026-01-10 00:40:14] Set ATHENA_PROC_NUMBER=8
[2026-01-10 00:40:14] Set ATHENA_CORE_NUMBER=8
[2026-01-10 00:40:14] Starting ATLAS job with PandaID=6963338545
[2026-01-10 00:40:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:52:35]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:52:35] 2026-01-10 05:51:24,066 | INFO     | time since job start (21998s) is within the limit (349056.0s)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,203 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:52:35] 2026-01-10 05:51:24,204 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 06:52:35] 2026-01-10 05:51:24,206 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963338545/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,207 | INFO     | extracted standard info from prmon json
[2026-01-10 06:52:35] 2026-01-10 05:51:24,207 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:52:35] 2026-01-10 05:51:24,207 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:52:35] 2026-01-10 05:51:24,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 06:52:35] 2026-01-10 05:51:24,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 06:52:35] 2026-01-10 05:51:24,215 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:52:35] 2026-01-10 05:51:24,216 | INFO     | sum of square deviations: 13294714387.5
[2026-01-10 06:52:35] 2026-01-10 05:51:24,220 | INFO     | sum of deviations: 215107719995.49997
[2026-01-10 06:52:35] 2026-01-10 05:51:24,227 | INFO     | mean x: 1768013470.5
[2026-01-10 06:52:35] 2026-01-10 05:51:24,227 | INFO     | mean y: 2436265.305714286
[2026-01-10 06:52:35] 2026-01-10 05:51:24,227 | INFO     | intersect: -28603920778.224728
[2026-01-10 06:52:35] 2026-01-10 05:51:24,227 | INFO     | chi2: 8.12743273558817
[2026-01-10 06:52:35] 2026-01-10 05:51:24,228 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,232 | INFO     | sum of deviations: 234703267061.99997
[2026-01-10 06:52:35] 2026-01-10 05:51:24,232 | INFO     | mean x: 1768013318.0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,233 | INFO     | mean y: 2441512.3942028987
[2026-01-10 06:52:35] 2026-01-10 05:51:24,233 | INFO     | intersect: -32586676483.46659
[2026-01-10 06:52:35] 2026-01-10 05:51:24,233 | INFO     | chi2: 7.401430988457582
[2026-01-10 06:52:35] 2026-01-10 05:51:24,233 | INFO     | current chi2=7.401430988457582 (change=8.93273153712602 %)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,234 | INFO     | right removable region: 344
[2026-01-10 06:52:35] 2026-01-10 05:51:24,234 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,238 | INFO     | sum of deviations: 93492358027.0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,238 | INFO     | mean x: 1768013623.0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,239 | INFO     | mean y: 2469269.3594202898
[2026-01-10 06:52:35] 2026-01-10 05:51:24,239 | INFO     | intersect: -12979173684.326385
[2026-01-10 06:52:35] 2026-01-10 05:51:24,239 | INFO     | chi2: 3.332503686588465
[2026-01-10 06:52:35] 2026-01-10 05:51:24,239 | INFO     | current chi2=3.332503686588465 (change=58.996846913340875 %)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,240 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,244 | INFO     | sum of deviations: 4675016637.000008
[2026-01-10 06:52:35] 2026-01-10 05:51:24,244 | INFO     | mean x: 1768013775.5
[2026-01-10 06:52:35] 2026-01-10 05:51:24,244 | INFO     | mean y: 2494059.788235294
[2026-01-10 06:52:35] 2026-01-10 05:51:24,244 | INFO     | intersect: -675705318.03992
[2026-01-10 06:52:35] 2026-01-10 05:51:24,245 | INFO     | chi2: 0.8794991706051524
[2026-01-10 06:52:35] 2026-01-10 05:51:24,245 | INFO     | current chi2=0.8794991706051524 (change=73.60845618431982 %)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,250 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,254 | INFO     | sum of deviations: -6535517368.999998
[2026-01-10 06:52:35] 2026-01-10 05:51:24,254 | INFO     | mean x: 1768013928.0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,254 | INFO     | mean y: 2497267.1343283583
[2026-01-10 06:52:35] 2026-01-10 05:51:24,254 | INFO     | intersect: 993686737.852541
[2026-01-10 06:52:35] 2026-01-10 05:51:24,255 | INFO     | chi2: 0.8197199657017233
[2026-01-10 06:52:35] 2026-01-10 05:51:24,255 | INFO     | current chi2=0.8197199657017233 (change=6.796959781360233 %)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,255 | INFO     | left removable region: 30
[2026-01-10 06:52:35] 2026-01-10 05:51:24,256 | INFO     | sum of square deviations: 9599817202.5
[2026-01-10 06:52:35] 2026-01-10 05:51:24,259 | INFO     | sum of deviations: 17472371916.5
[2026-01-10 06:52:35] 2026-01-10 05:51:24,260 | INFO     | mean x: 1768014202.5
[2026-01-10 06:52:35] 2026-01-10 05:51:24,260 | INFO     | mean y: 2503005.4426751593
[2026-01-10 06:52:35] 2026-01-10 05:51:24,260 | INFO     | intersect: -3215412611.91818
[2026-01-10 06:52:35] 2026-01-10 05:51:24,260 | INFO     | chi2: 0.0007553329029538257
[2026-01-10 06:52:35] 2026-01-10 05:51:24,261 | INFO     | current memory leak: 1.82 B/s (using 314 data points, chi2=0.00)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,261 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,262 | INFO     | ..............................
[2026-01-10 06:52:35] 2026-01-10 05:51:24,262 | INFO     | . Timing measurements:
[2026-01-10 06:52:35] 2026-01-10 05:51:24,262 | INFO     | . get job = 0 s
[2026-01-10 06:52:35] 2026-01-10 05:51:24,262 | INFO     | . initial setup = 11 s
[2026-01-10 06:52:35] 2026-01-10 05:51:24,262 | INFO     | . payload setup = 148 s
[2026-01-10 06:52:35] 2026-01-10 05:51:24,262 | INFO     | . stage-in = 0 s
[2026-01-10 06:52:35] 2026-01-10 05:51:24,262 | INFO     | . payload execution = 21506 s
[2026-01-10 06:52:35] 2026-01-10 05:51:24,263 | INFO     | . stage-out = 5 s
[2026-01-10 06:52:35] 2026-01-10 05:51:24,263 | INFO     | . log creation = 1 s
[2026-01-10 06:52:35] 2026-01-10 05:51:24,263 | INFO     | ..............................
[2026-01-10 06:52:35] 2026-01-10 05:51:24,391 | INFO     | 
[2026-01-10 06:52:35] 2026-01-10 05:51:24,392 | INFO     | job summary report
[2026-01-10 06:52:35] 2026-01-10 05:51:24,392 | INFO     | --------------------------------------------------
[2026-01-10 06:52:35] 2026-01-10 05:51:24,392 | INFO     | PanDA job id: 6963338545
[2026-01-10 06:52:35] 2026-01-10 05:51:24,392 | INFO     | task id: 47898826
[2026-01-10 06:52:35] 2026-01-10 05:51:24,392 | INFO     | errors: (none)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,392 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:52:35] 2026-01-10 05:51:24,392 | INFO     | pilot state: finished 
[2026-01-10 06:52:35] 2026-01-10 05:51:24,392 | INFO     | transexitcode: 0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | exeerrorcode: 0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | exeerrordiag: 
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | exitcode: 0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | exitmsg: OK
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | cpuconsumptiontime: 81176 s
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | nevents: 400
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | neventsw: 0
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | pid: 6386
[2026-01-10 06:52:35] 2026-01-10 05:51:24,393 | INFO     | pgrp: 6386
[2026-01-10 06:52:35] 2026-01-10 05:51:24,394 | INFO     | corecount: 8
[2026-01-10 06:52:35] 2026-01-10 05:51:24,394 | INFO     | event service: False
[2026-01-10 06:52:35] 2026-01-10 05:51:24,394 | INFO     | sizes: {0: 2283693, 1: 2283948, 12: 2283948, 23: 2283976, 34: 2284004, 44: 2284032, 55: 2284188, 66: 2284216, 77: 2284244, 87: 2284300, 98: 2284328, 109: 2284954, 
[2026-01-10 06:52:35] 2026-01-10 05:51:24,394 | INFO     | --------------------------------------------------
[2026-01-10 06:52:35] 2026-01-10 05:51:24,394 | INFO     | 
[2026-01-10 06:52:35] 2026-01-10 05:51:24,394 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-10 06:52:35] 2026-01-10 05:51:24,969 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,969 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,969 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,969 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,971 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,971 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:52:35] 2026-01-10 05:51:24,972 | INFO     | job 6963338545 has completed (purged errors)
[2026-01-10 06:52:35] 2026-01-10 05:51:24,972 | INFO     | overall cleanup function is called
[2026-01-10 06:52:35] 2026-01-10 05:51:25,980 | INFO     | --- collectZombieJob: --- 10, [6386]
[2026-01-10 06:52:35] 2026-01-10 05:51:25,981 | INFO     | zombie collector waiting for pid 6386
[2026-01-10 06:52:35] 2026-01-10 05:51:25,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:52:35] 2026-01-10 05:51:25,981 | INFO     | collected zombie processes
[2026-01-10 06:52:35] 2026-01-10 05:51:25,981 | INFO     | will attempt to kill all subprocesses of pid=6386
[2026-01-10 06:52:35] 2026-01-10 05:51:26,073 | INFO     | process IDs to be killed: [6386] (in reverse order)
[2026-01-10 06:52:35] 2026-01-10 05:51:26,915 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:52:35] 2026-01-10 05:51:26,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:52:35] 2026-01-10 05:51:26,917 | INFO     | did not find any defunct processes belonging to 6386
[2026-01-10 06:52:35] 2026-01-10 05:51:26,919 | INFO     | did not find any defunct processes belonging to 6386
[2026-01-10 06:52:35] 2026-01-10 05:51:26,920 | INFO     | ready for new job
[2026-01-10 06:52:35] 2026-01-10 05:51:26,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:52:35] 2026-01-10 05:51:26,922 | INFO     | ***************************************
[2026-01-10 06:52:35] 2026-01-10 05:51:26,922 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:52:35] 2026-01-10 05:51:26,922 | INFO     | ***************************************
[2026-01-10 06:52:35] 2026-01-10 05:51:26,923 | INFO     | 
[2026-01-10 06:52:35] 2026-01-10 05:51:26,923 | INFO     | pilot is running in a VM
[2026-01-10 06:52:35] 2026-01-10 05:51:26,923 | INFO     | architecture information:
[2026-01-10 06:52:35] 2026-01-10 05:51:26,932 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:52:35] 2026-01-10 05:51:27,228 | INFO     | cat /etc/os-release:
[2026-01-10 06:52:35] NAME="CentOS Linux"
[2026-01-10 06:52:35] VERSION="7 (Core)"
[2026-01-10 06:52:35] ID="centos"
[2026-01-10 06:52:35] ID_LIKE="rhel fedora"
[2026-01-10 06:52:35] VERSION_ID="7"
[2026-01-10 06:52:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:52:35] ANSI_COLOR="0;31"
[2026-01-10 06:52:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:52:35] HOME_URL="https://www.centos.org/"
[2026-01-10 06:52:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:52:35] 
[2026-01-10 06:52:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:52:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:52:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:52:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:52:35] 
[2026-01-10 06:52:35] 2026-01-10 05:51:27,228 | INFO     | ***************************************
[2026-01-10 06:52:35] 2026-01-10 05:51:27,732 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-10 06:52:35] 2026-01-10 05:51:27,980 | INFO     | sufficient remaining disk space (497221107712 B)
[2026-01-10 06:52:35] 2026-01-10 05:51:27,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:52:35] 2026-01-10 05:51:27,981 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:52:35] 2026-01-10 05:51:27,981 | INFO     | update_server=False
[2026-01-10 06:52:35] 2026-01-10 05:51:27,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:52:35] 2026-01-10 05:51:27,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:52:35] 2026-01-10 05:51:28,047 | INFO     | all payload control threads have been joined
[2026-01-10 06:52:35] 2026-01-10 05:51:28,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:52:35] 2026-01-10 05:51:28,217 | INFO     | aborting loop
[2026-01-10 06:52:35] 2026-01-10 05:51:28,509 | INFO     | all data control threads have been joined
[2026-01-10 06:52:35] 2026-01-10 05:51:28,568 | INFO     | all job control threads have been joined
[2026-01-10 06:52:35] 2026-01-10 05:51:28,986 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:29,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:52:35] 2026-01-10 05:51:29,053 | INFO     | [payload] control thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:29,223 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:29,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:29,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:52:35] 2026-01-10 05:51:29,436 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:29,515 | INFO     | [data] control thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:29,574 | INFO     | [job] control thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:29,922 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:29,994 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:30,096 | INFO     | [job] validate thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:30,196 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:30,264 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:30,346 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:30,401 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:30,417 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:33,055 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:52:35] 2026-01-10 05:51:57,246 | INFO     | PID=32131 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:52:35] 2026-01-10 05:51:57,246 | INFO     | .. there are 2 such processes running
[2026-01-10 06:52:35] 2026-01-10 05:51:57,246 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:52:35] 2026-01-10 05:51:57,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:52:35] 2026-01-10 05:51:57,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:52:35] 2026-01-10 05:52:23,816 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:52:35] 2026-01-10 05:52:24,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655900735296)>', '<ExcThread(monitor, started 139655450175232)>']
[2026-01-10 06:52:35] 2026-01-10 05:52:24,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:52:35] 2026-01-10 05:52:24,408 | INFO     | [monitor] control thread has ended
[2026-01-10 06:52:35] 2026-01-10 05:52:29,342 | INFO     | all workflow threads have been joined
[2026-01-10 06:52:35] 2026-01-10 05:52:29,343 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:52:35] 2026-01-10 05:52:29,343 | INFO     | traces error code: 0
[2026-01-10 06:52:35] 2026-01-10 05:52:29,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:52:35] 2026-01-10 05:52:29,856 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:52:35] 2026-01-10 05:52:29,973 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:52:35] 2026-01-10 05:52:30,086 [wrapper] pilotpid: 32131
[2026-01-10 06:52:35] 2026-01-10 05:52:30,201 [wrapper] Pilot exit status: 0
[2026-01-10 06:52:35] 2026-01-10 05:52:30,702 [wrapper] pandaids: 6963338545
[2026-01-10 06:52:35] 2026-01-10 05:52:31,769 [wrapper] cleanup supervisor_pilot  5513 32132
[2026-01-10 06:52:35] 2026-01-10 05:52:31,834 [wrapper] Test setup, not cleaning
[2026-01-10 06:52:35] 2026-01-10 05:52:31,894 [wrapper] apfmon messages muted
[2026-01-10 06:52:35] 2026-01-10 05:52:31,983 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:52:35] 2026-01-10 05:52:32,080 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:52:35]  *** Error codes and diagnostics ***
[2026-01-10 06:52:35]     "exeErrorCode": 0,
[2026-01-10 06:52:35]     "exeErrorDiag": "",
[2026-01-10 06:52:35]     "pilotErrorCode": 0,
[2026-01-10 06:52:35]     "pilotErrorDiag": "",
[2026-01-10 06:52:35]  *** Listing of results directory ***
[2026-01-10 06:52:35] total 446436
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 06:52:35] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc       100 Jan 10 00:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:52:35] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 00:39 run_atlas
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc       105 Jan 10 00:39 job.xml
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc      6391 Jan 10 00:39 init_data.xml
[2026-01-10 06:52:35] -rw-r--r--. 2 boinc boinc 225516447 Jan 10 00:39 EVNT.47898824._000708.pool.root.1
[2026-01-10 06:52:35] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:39 start_atlas.sh
[2026-01-10 06:52:35] drwxrwx--x. 2 boinc boinc        68 Jan 10 00:39 shared
[2026-01-10 06:52:35] -rw-r--r--. 2 boinc boinc    592400 Jan 10 00:39 input.tar.gz
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc         0 Jan 10 00:39 boinc_lockfile
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc      2519 Jan 10 00:40 pandaJob.out
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc    989374 Jan 10 00:44 agis_schedconf.cvmfs.json
[2026-01-10 06:52:35] drwx------. 5 boinc boinc      4096 Jan 10 00:44 pilot3
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc 220769308 Jan 10 06:48 HITS.47898826._039490.pool.root.1
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc       531 Jan 10 06:48 boinc_task_state.xml
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc      1011 Jan 10 06:49 memory_monitor_summary.json
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc   1516240 Jan 10 06:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc    555497 Jan 10 06:49 log.47898826._039490.job.log.tgz.1
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc      7777 Jan 10 06:51 heartbeat.json
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc        95 Jan 10 06:51 pilot_heartbeat.json
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc      8192 Jan 10 06:52 boinc_mmap_file
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc        28 Jan 10 06:52 wrapper_checkpoint.txt
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc      4885 Jan 10 06:52 pilotlog.txt
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc   2930146 Jan 10 06:52 log.47898826._039490.job.log.1
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc       357 Jan 10 06:52 output.list
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc       620 Jan 10 06:52 runtime_log
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc   3502080 Jan 10 06:52 result.tar.gz
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc      8833 Jan 10 06:52 runtime_log.err
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc       657 Jan 10 06:52 IeELDmHDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmu1gKDmAFmUFm.diag
[2026-01-10 06:52:35] -rw-r--r--. 1 boinc boinc     20522 Jan 10 06:52 stderr.txt
[2026-01-10 06:52:35] HITS file was successfully produced:
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc 220769308 Jan 10 06:48 shared/HITS.pool.root.1
[2026-01-10 06:52:35]  *** Contents of shared directory: ***
[2026-01-10 06:52:35] total 439844
[2026-01-10 06:52:35] -rw-r--r--. 2 boinc boinc 225516447 Jan 10 00:39 ATLAS.root_0
[2026-01-10 06:52:35] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:39 start_atlas.sh
[2026-01-10 06:52:35] -rw-r--r--. 2 boinc boinc    592400 Jan 10 00:39 input.tar.gz
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc 220769308 Jan 10 06:48 HITS.pool.root.1
[2026-01-10 06:52:35] -rw-------. 1 boinc boinc   3502080 Jan 10 06:52 result.tar.gz
06:52:37 (28359): run_atlas exited; CPU time 81393.196918
06:52:37 (28359): called boinc_finish(0)

</stderr_txt>
]]>

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