Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:38:46 (228110): wrapper (7.7.26015): starting
14:38:46 (228110): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:38:46] Arguments: --nthreads 8
[2026-01-09 14:38:46] Threads: 8
[2026-01-09 14:38:46] Checking for CVMFS
[2026-01-09 14:38:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:38:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:38:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:38:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:38:47] 2.13.3.0 12388 93794 209320 154955 2 147 32605238 32935936 15422 16776704 0 414565033 99.473 552477327 38101 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:38:47] CVMFS is ok
[2026-01-09 14:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:38:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:38:47] Further information can be found at the LHC@home message board.
[2026-01-09 14:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:38:47] Checking for apptainer binary...
[2026-01-09 14:38:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:38:47] Running /usr/bin/apptainer --version
[2026-01-09 14:38:47] apptainer version 1.4.5-2.el9
[2026-01-09 14:38:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:38:48] c7-4-31.aglt2.org
[2026-01-09 14:38:48] apptainer works
[2026-01-09 14:38:48] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:38:48] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:38:48] Starting ATLAS job with PandaID=6963162028
[2026-01-09 14:38:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:58:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:58:41] 2026-01-10 00:57:44,075 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3230.543729166667
[2026-01-09 19:58:41] 2026-01-10 00:57:44,091 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963162028/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,092 | INFO     | extracted standard info from prmon json
[2026-01-09 19:58:41] 2026-01-10 00:57:44,092 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:58:41] 2026-01-10 00:57:44,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:58:41] 2026-01-10 00:57:44,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:58:41] 2026-01-10 00:57:44,103 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:58:41] 2026-01-10 00:57:44,126 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:58:41] 2026-01-10 00:57:44,126 | INFO     | sum of square deviations: 9327245401.839281
[2026-01-09 19:58:41] 2026-01-10 00:57:44,195 | INFO     | sum of deviations: -16530579722.890656
[2026-01-09 19:58:41] 2026-01-10 00:57:44,195 | INFO     | mean x: 1767997162.0610933
[2026-01-09 19:58:41] 2026-01-10 00:57:44,195 | INFO     | mean y: 2501251.6784565914
[2026-01-09 19:58:41] 2026-01-10 00:57:44,196 | INFO     | intersect: 3135904178.070007
[2026-01-09 19:58:41] 2026-01-10 00:57:44,196 | INFO     | chi2: 4.484378212911146
[2026-01-09 19:58:41] 2026-01-10 00:57:44,196 | INFO     | sum of square deviations: 8884554279.441135
[2026-01-09 19:58:41] 2026-01-10 00:57:44,217 | INFO     | monitor loop #1213: job 0:6963162028 is in state 'finished'
[2026-01-09 19:58:41] 2026-01-10 00:57:44,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,217 | INFO     | sum of deviations: 24513416565.41173
[2026-01-09 19:58:41] 2026-01-10 00:57:44,217 | INFO     | mean x: 1767997009.5588236
[2026-01-09 19:58:41] 2026-01-10 00:57:44,217 | INFO     | mean y: 2515255.6993464055
[2026-01-09 19:58:41] 2026-01-10 00:57:44,218 | INFO     | intersect: -4875573820.981253
[2026-01-09 19:58:41] 2026-01-10 00:57:44,218 | INFO     | chi2: 2.992706034740038
[2026-01-09 19:58:41] 2026-01-10 00:57:44,218 | INFO     | current chi2=2.992706034740038 (change=33.2637459944029 %)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,218 | INFO     | sum of square deviations: 8456114526.923631
[2026-01-09 19:58:41] 2026-01-10 00:57:44,239 | INFO     | sum of deviations: 24075372211.126263
[2026-01-09 19:58:41] 2026-01-10 00:57:44,239 | INFO     | mean x: 1767996857.0598006
[2026-01-09 19:58:41] 2026-01-10 00:57:44,239 | INFO     | mean y: 2515099.7707641195
[2026-01-09 19:58:41] 2026-01-10 00:57:44,239 | INFO     | intersect: -5031142174.653768
[2026-01-09 19:58:41] 2026-01-10 00:57:44,239 | INFO     | chi2: 2.993713461777171
[2026-01-09 19:58:41] 2026-01-10 00:57:44,240 | INFO     | current chi2=2.993713461777171 (change=-0.03366274620488266 %)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,240 | INFO     | right removable region: 300
[2026-01-09 19:58:41] 2026-01-10 00:57:44,240 | INFO     | sum of square deviations: 8884561539.320246
[2026-01-09 19:58:41] 2026-01-10 00:57:44,242 | INFO     | sum of deviations: -90686398697.86938
[2026-01-09 19:58:41] 2026-01-10 00:57:44,264 | INFO     | mean x: 1767997314.5620916
[2026-01-09 19:58:41] 2026-01-10 00:57:44,264 | INFO     | mean y: 2526685.545751634
[2026-01-09 19:58:41] 2026-01-10 00:57:44,264 | INFO     | intersect: 18048809403.669315
[2026-01-09 19:58:41] 2026-01-10 00:57:44,264 | INFO     | chi2: 1.9554544105531968
[2026-01-09 19:58:41] 2026-01-10 00:57:44,264 | INFO     | current chi2=1.9554544105531968 (change=56.394079229910346 %)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,265 | INFO     | sum of square deviations: 8456129166.923631
[2026-01-09 19:58:41] 2026-01-10 00:57:44,267 | INFO     | sum of deviations: -97569112904.3256
[2026-01-09 19:58:41] 2026-01-10 00:57:44,267 | INFO     | mean x: 1767997467.0598006
[2026-01-09 19:58:41] 2026-01-10 00:57:44,267 | INFO     | mean y: 2529116.906976744
[2026-01-09 19:58:41] 2026-01-10 00:57:44,267 | INFO     | intersect: 20402163639.14976
[2026-01-09 19:58:41] 2026-01-10 00:57:44,283 | INFO     | chi2: 1.9067044480716233
[2026-01-09 19:58:41] 2026-01-10 00:57:44,283 | INFO     | current chi2=1.9067044480716233 (change=2.4930247526344607 %)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,283 | INFO     | left removable region: 20
[2026-01-09 19:58:41] 2026-01-10 00:57:44,283 | INFO     | sum of square deviations: 6806833857.085686
[2026-01-09 19:58:41] 2026-01-10 00:57:44,285 | INFO     | sum of deviations: -35990955655.72857
[2026-01-09 19:58:41] 2026-01-10 00:57:44,285 | INFO     | mean x: 1767997436.557143
[2026-01-09 19:58:41] 2026-01-10 00:57:44,285 | INFO     | mean y: 2536507.6392857144
[2026-01-09 19:58:41] 2026-01-10 00:57:44,285 | INFO     | intersect: 9350776625.52188
[2026-01-09 19:58:41] 2026-01-10 00:57:44,286 | INFO     | chi2: 0.29252422722494925
[2026-01-09 19:58:41] 2026-01-10 00:57:44,286 | INFO     | current memory leak: -5.29 B/s (using 280 data points, chi2=0.29)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,286 | INFO     | could have reported an average CPU frequency of 3175 MHz (14 samples)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | ..............................
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | . Timing measurements:
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | . get job = 0 s
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | . initial setup = 7 s
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | . payload setup = 40 s
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | . stage-in = 0 s
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | . payload execution = 18949 s
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | . stage-out = 4 s
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | . log creation = 0 s
[2026-01-09 19:58:41] 2026-01-10 00:57:44,287 | INFO     | ..............................
[2026-01-09 19:58:41] 2026-01-10 00:57:44,399 | INFO     | 
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | job summary report
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | --------------------------------------------------
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | PanDA job id: 6963162028
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | task id: 47898826
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | errors: (none)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | pilot state: finished 
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | transexitcode: 0
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | exeerrorcode: 0
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | exeerrordiag: 
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | exitcode: 0
[2026-01-09 19:58:41] 2026-01-10 00:57:44,400 | INFO     | exitmsg: OK
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | cpuconsumptiontime: 44045 s
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | nevents: 400
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | neventsw: 0
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | pid: 244445
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | pgrp: 244445
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | corecount: 8
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | event service: False
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | sizes: {0: 2283142, 1: 2283827, 2: 2283827, 3: 2284054, 4: 2284054, 16: 2284082, 27: 2284238, 29: 2284528, 38: 2284556, 18993: 2317642, 18994: 2317641, 18999: 2326
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | --------------------------------------------------
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | 
[2026-01-09 19:58:41] 2026-01-10 00:57:44,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 19:58:41] 2026-01-10 00:57:44,547 | INFO     | time since job start (19063s) is within the limit (349056.0s)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,573 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,573 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:58:41] 2026-01-10 00:57:44,574 | INFO     | job 6963162028 has completed (purged errors)
[2026-01-09 19:58:41] 2026-01-10 00:57:44,575 | INFO     | overall cleanup function is called
[2026-01-09 19:58:41] 2026-01-10 00:57:45,583 | INFO     | --- collectZombieJob: --- 10, [244445]
[2026-01-09 19:58:41] 2026-01-10 00:57:45,584 | INFO     | zombie collector waiting for pid 244445
[2026-01-09 19:58:41] 2026-01-10 00:57:45,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:58:41] 2026-01-10 00:57:45,584 | INFO     | collected zombie processes
[2026-01-09 19:58:41] 2026-01-10 00:57:45,584 | INFO     | will attempt to kill all subprocesses of pid=244445
[2026-01-09 19:58:41] 2026-01-10 00:57:47,106 | INFO     | process IDs to be killed: [244445] (in reverse order)
[2026-01-09 19:58:41] 2026-01-10 00:57:47,325 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:58:41] 2026-01-10 00:57:47,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:58:41] 2026-01-10 00:57:47,346 | INFO     | did not find any defunct processes belonging to 244445
[2026-01-09 19:58:41] 2026-01-10 00:57:47,362 | INFO     | did not find any defunct processes belonging to 244445
[2026-01-09 19:58:41] 2026-01-10 00:57:47,362 | INFO     | ready for new job
[2026-01-09 19:58:41] 2026-01-10 00:57:47,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:58:41] 2026-01-10 00:57:47,394 | INFO     | ***************************************
[2026-01-09 19:58:41] 2026-01-10 00:57:47,396 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:58:41] 2026-01-10 00:57:47,397 | INFO     | ***************************************
[2026-01-09 19:58:41] 2026-01-10 00:57:47,397 | INFO     | 
[2026-01-09 19:58:41] 2026-01-10 00:57:47,402 | INFO     | architecture information:
[2026-01-09 19:58:41] 2026-01-10 00:57:47,402 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:58:41] 2026-01-10 00:57:47,437 | INFO     | cat /etc/os-release:
[2026-01-09 19:58:41] NAME="CentOS Linux"
[2026-01-09 19:58:41] VERSION="7 (Core)"
[2026-01-09 19:58:41] ID="centos"
[2026-01-09 19:58:41] ID_LIKE="rhel fedora"
[2026-01-09 19:58:41] VERSION_ID="7"
[2026-01-09 19:58:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:58:41] ANSI_COLOR="0;31"
[2026-01-09 19:58:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:58:41] HOME_URL="https://www.centos.org/"
[2026-01-09 19:58:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:58:41] 
[2026-01-09 19:58:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:58:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:58:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:58:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:58:41] 
[2026-01-09 19:58:41] 2026-01-10 00:57:47,438 | INFO     | ***************************************
[2026-01-09 19:58:41] 2026-01-10 00:57:47,941 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 19:58:41] 2026-01-10 00:57:47,992 | INFO     | sufficient remaining disk space (73380397056 B)
[2026-01-09 19:58:41] 2026-01-10 00:57:47,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:58:41] 2026-01-10 00:57:47,996 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:58:41] 2026-01-10 00:57:47,996 | INFO     | update_server=False
[2026-01-09 19:58:41] 2026-01-10 00:57:47,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:58:41] 2026-01-10 00:57:47,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:58:41] 2026-01-10 00:57:47,998 | INFO     | aborting loop
[2026-01-09 19:58:41] 2026-01-10 00:57:48,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:58:41] 2026-01-10 00:57:48,403 | INFO     | all data control threads have been joined
[2026-01-09 19:58:41] 2026-01-10 00:57:49,001 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:49,004 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:49,010 | INFO     | all payload control threads have been joined
[2026-01-09 19:58:41] 2026-01-10 00:57:49,410 | INFO     | [data] control thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:49,431 | INFO     | all job control threads have been joined
[2026-01-09 19:58:41] 2026-01-10 00:57:49,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:58:41] 2026-01-10 00:57:49,494 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:49,521 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:49,778 | INFO     | [job] validate thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,016 | INFO     | [payload] control thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,023 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,249 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,320 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,323 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,333 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:58:41] 2026-01-10 00:57:50,399 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,437 | INFO     | [job] control thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:50,438 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:57:54,429 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:58:41] 2026-01-10 00:58:20,697 | INFO     | PID=232591 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 19:58:41] 2026-01-10 00:58:20,697 | INFO     | .. there are 17 such processes running
[2026-01-09 19:58:41] 2026-01-10 00:58:20,698 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:58:41] 2026-01-10 00:58:20,698 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:58:41] 2026-01-10 00:58:20,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:58:41] 2026-01-10 00:58:33,451 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:58:41] 2026-01-10 00:58:33,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967434053440)>', '<ExcThread(monitor, started 139966264895232)>']
[2026-01-09 19:58:41] 2026-01-10 00:58:34,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:58:41] 2026-01-10 00:58:34,793 | INFO     | [monitor] control thread has ended
[2026-01-09 19:58:41] 2026-01-10 00:58:39,015 | INFO     | all workflow threads have been joined
[2026-01-09 19:58:41] 2026-01-10 00:58:39,016 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:58:41] 2026-01-10 00:58:39,048 | INFO     | traces error code: 0
[2026-01-09 19:58:41] 2026-01-10 00:58:39,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:58:41] 2026-01-10 00:58:40,350 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:58:41] 2026-01-10 00:58:40,368 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:58:41] 2026-01-10 00:58:40,390 [wrapper] pilotpid: 232591
[2026-01-09 19:58:41] 2026-01-10 00:58:40,400 [wrapper] Pilot exit status: 0
[2026-01-09 19:58:41] 2026-01-10 00:58:40,481 [wrapper] pandaids: 6963162028
[2026-01-09 19:58:41] 2026-01-10 00:58:40,645 [wrapper] cleanup supervisor_pilot 1118378 232592
[2026-01-09 19:58:41] 2026-01-10 00:58:40,674 [wrapper] Test setup, not cleaning
[2026-01-09 19:58:41] 2026-01-10 00:58:40,698 [wrapper] apfmon messages muted
[2026-01-09 19:58:41] 2026-01-10 00:58:40,750 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:58:41] 2026-01-10 00:58:40,780 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:58:41]  *** Error codes and diagnostics ***
[2026-01-09 19:58:41]     "exeErrorCode": 0,
[2026-01-09 19:58:41]     "exeErrorDiag": "",
[2026-01-09 19:58:41]     "pilotErrorCode": 0,
[2026-01-09 19:58:41]     "pilotErrorDiag": "",
[2026-01-09 19:58:41]  *** Listing of results directory ***
[2026-01-09 19:58:41] total 446228
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 19:58:41] -rwx------. 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:58:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:38 run_atlas
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:38 job.xml
[2026-01-09 19:58:41] -rw-r--r--. 2 boincer umatlas 225451417 Jan  9 14:38 EVNT.47898824._001235.pool.root.1
[2026-01-09 19:58:41] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:38 start_atlas.sh
[2026-01-09 19:58:41] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:38 shared
[2026-01-09 19:58:41] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 14:38 input.tar.gz
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:38 boinc_lockfile
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 14:38 pandaJob.out
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas        57 Jan  9 14:38 setup.sh.local
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas    989364 Jan  9 14:39 agis_schedconf.cvmfs.json
[2026-01-09 19:58:41] drwx------. 5 boincer umatlas      4096 Jan  9 14:40 pilot3
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas 221639448 Jan  9 19:55 HITS.47898826._033655.pool.root.1
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas       531 Jan  9 19:55 boinc_task_state.xml
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas      1032 Jan  9 19:57 memory_monitor_summary.json
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:57 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas    509370 Jan  9 19:57 log.47898826._033655.job.log.tgz.1
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 19:57 init_data.xml
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas      7777 Jan  9 19:57 heartbeat.json
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas        95 Jan  9 19:58 pilot_heartbeat.json
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas      4823 Jan  9 19:58 pilotlog.txt
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas   2454268 Jan  9 19:58 log.47898826._033655.job.log.1
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas       357 Jan  9 19:58 output.list
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:58 wrapper_checkpoint.txt
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:58 runtime_log
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas   2979840 Jan  9 19:58 result.tar.gz
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 19:58 runtime_log.err
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas       655 Jan  9 19:58 4gQNDmS1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfWlKDmIeGQAn.diag
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:58 boinc_mmap_file
[2026-01-09 19:58:41] -rw-r--r--. 1 boincer umatlas     21254 Jan  9 19:58 stderr.txt
[2026-01-09 19:58:41] HITS file was successfully produced:
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas 221639448 Jan  9 19:55 shared/HITS.pool.root.1
[2026-01-09 19:58:41]  *** Contents of shared directory: ***
[2026-01-09 19:58:41] total 440132
[2026-01-09 19:58:41] -rw-r--r--. 2 boincer umatlas 225451417 Jan  9 14:38 ATLAS.root_0
[2026-01-09 19:58:41] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:38 start_atlas.sh
[2026-01-09 19:58:41] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 14:38 input.tar.gz
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas 221639448 Jan  9 19:55 HITS.pool.root.1
[2026-01-09 19:58:41] -rw-------. 1 boincer umatlas   2979840 Jan  9 19:58 result.tar.gz
19:58:43 (228110): run_atlas exited; CPU time 44786.699933
19:58:43 (228110): called boinc_finish(0)

</stderr_txt>
]]>

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