Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:44:05 (18363): wrapper (7.7.26015): starting
14:44:05 (18363): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:44:05] Arguments: --nthreads 8
[2026-01-09 14:44:05] Threads: 8
[2026-01-09 14:44:05] Checking for CVMFS
[2026-01-09 14:44:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:44:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:44:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:44:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:44:05] 2.11.2.0 16446 181460 135484 154955 1 99 16763409 18432001 1859 130560 0 122652539 99.980 6969201 32378 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:44:05] CVMFS is ok
[2026-01-09 14:44:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:44:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:44:05] Further information can be found at the LHC@home message board.
[2026-01-09 14:44:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:44:05] Checking for apptainer binary...
[2026-01-09 14:44:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:44:05] Running /usr/bin/apptainer --version
[2026-01-09 14:44:05] apptainer version 1.3.2-1.el7
[2026-01-09 14:44:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:44:06] c-206-26.aglt2.org
[2026-01-09 14:44:06] apptainer works
[2026-01-09 14:44:06] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:44:06] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:44:06] Starting ATLAS job with PandaID=6963192083
[2026-01-09 14:44:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:13:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:13:12] 2026-01-10 00:12:38,843 | INFO     | time since job start (16101s) is within the limit (349056.0s)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,021 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 19:13:12] 2026-01-10 00:12:40,028 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2416.9166666666665
[2026-01-09 19:13:12] 2026-01-10 00:12:40,032 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963192083/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,033 | INFO     | extracted standard info from prmon json
[2026-01-09 19:13:12] 2026-01-10 00:12:40,033 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:13:12] 2026-01-10 00:12:40,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:13:12] 2026-01-10 00:12:40,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:13:12] 2026-01-10 00:12:40,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:13:12] 2026-01-10 00:12:40,041 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:13:12] 2026-01-10 00:12:40,042 | INFO     | sum of square deviations: 5705372090.0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,045 | INFO     | sum of deviations: -6266664108.499985
[2026-01-09 19:13:12] 2026-01-10 00:12:40,045 | INFO     | mean x: 1767995903.5
[2026-01-09 19:13:12] 2026-01-10 00:12:40,045 | INFO     | mean y: 2488341.5416666665
[2026-01-09 19:13:12] 2026-01-10 00:12:40,045 | INFO     | intersect: 1944418911.1284878
[2026-01-09 19:13:12] 2026-01-10 00:12:40,046 | INFO     | chi2: 2.270830885044561
[2026-01-09 19:13:12] 2026-01-10 00:12:40,046 | INFO     | sum of square deviations: 5387301010.0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,049 | INFO     | sum of deviations: 10958155839.00001
[2026-01-09 19:13:12] 2026-01-10 00:12:40,049 | INFO     | mean x: 1767995751.0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,049 | INFO     | mean y: 2496470.980694981
[2026-01-09 19:13:12] 2026-01-10 00:12:40,050 | INFO     | intersect: -3593733427.104739
[2026-01-09 19:13:12] 2026-01-10 00:12:40,050 | INFO     | chi2: 1.4978411657631168
[2026-01-09 19:13:12] 2026-01-10 00:12:40,050 | INFO     | current chi2=1.4978411657631168 (change=34.039950943606954 %)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,051 | INFO     | sum of square deviations: 5081276667.5
[2026-01-09 19:13:12] 2026-01-10 00:12:40,054 | INFO     | sum of deviations: 10355848945.499994
[2026-01-09 19:13:12] 2026-01-10 00:12:40,054 | INFO     | mean x: 1767995598.5
[2026-01-09 19:13:12] 2026-01-10 00:12:40,054 | INFO     | mean y: 2496170.783464567
[2026-01-09 19:13:12] 2026-01-10 00:12:40,054 | INFO     | intersect: -3600750916.996736
[2026-01-09 19:13:12] 2026-01-10 00:12:40,055 | INFO     | chi2: 1.497864608839293
[2026-01-09 19:13:12] 2026-01-10 00:12:40,055 | INFO     | current chi2=1.497864608839293 (change=-0.001565124307713605 %)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,055 | INFO     | right removable region: 253
[2026-01-09 19:13:12] 2026-01-10 00:12:40,056 | INFO     | sum of square deviations: 5387301010.0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,058 | INFO     | sum of deviations: -43297882106.0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,059 | INFO     | mean x: 1767996056.0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,059 | INFO     | mean y: 2505933.868725869
[2026-01-09 19:13:12] 2026-01-10 00:12:40,059 | INFO     | intersect: 14211937457.087246
[2026-01-09 19:13:12] 2026-01-10 00:12:40,060 | INFO     | chi2: 0.9571293389462501
[2026-01-09 19:13:12] 2026-01-10 00:12:40,060 | INFO     | current chi2=0.9571293389462501 (change=57.85113963132186 %)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,060 | INFO     | sum of square deviations: 5081276667.5
[2026-01-09 19:13:12] 2026-01-10 00:12:40,063 | INFO     | sum of deviations: -45662467165.50001
[2026-01-09 19:13:12] 2026-01-10 00:12:40,063 | INFO     | mean x: 1767996208.5
[2026-01-09 19:13:12] 2026-01-10 00:12:40,063 | INFO     | mean y: 2507096.1456692913
[2026-01-09 19:13:12] 2026-01-10 00:12:40,063 | INFO     | intersect: 15890456936.72769
[2026-01-09 19:13:12] 2026-01-10 00:12:40,064 | INFO     | chi2: 0.9391316197547609
[2026-01-09 19:13:12] 2026-01-10 00:12:40,064 | INFO     | current chi2=0.9391316197547609 (change=1.8803852790996605 %)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,064 | INFO     | left removable region: 20
[2026-01-09 19:13:12] 2026-01-10 00:12:40,065 | INFO     | sum of square deviations: 3922276332.0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,067 | INFO     | sum of deviations: -15028021244.00002
[2026-01-09 19:13:12] 2026-01-10 00:12:40,067 | INFO     | mean x: 1767996178.0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,067 | INFO     | mean y: 2508415.330472103
[2026-01-09 19:13:12] 2026-01-10 00:12:40,067 | INFO     | intersect: 6776504399.633508
[2026-01-09 19:13:12] 2026-01-10 00:12:40,068 | INFO     | chi2: 0.11673829903868542
[2026-01-09 19:13:12] 2026-01-10 00:12:40,068 | INFO     | current memory leak: -3.83 B/s (using 233 data points, chi2=0.12)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,069 | INFO     | could have reported an average CPU frequency of 2577 MHz (12 samples)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,069 | INFO     | ..............................
[2026-01-09 19:13:12] 2026-01-10 00:12:40,069 | INFO     | . Timing measurements:
[2026-01-09 19:13:12] 2026-01-10 00:12:40,069 | INFO     | . get job = 0 s
[2026-01-09 19:13:12] 2026-01-10 00:12:40,069 | INFO     | . initial setup = 2 s
[2026-01-09 19:13:12] 2026-01-10 00:12:40,070 | INFO     | . payload setup = 4 s
[2026-01-09 19:13:12] 2026-01-10 00:12:40,070 | INFO     | . stage-in = 0 s
[2026-01-09 19:13:12] 2026-01-10 00:12:40,070 | INFO     | . payload execution = 16070 s
[2026-01-09 19:13:12] 2026-01-10 00:12:40,070 | INFO     | . stage-out = 2 s
[2026-01-09 19:13:12] 2026-01-10 00:12:40,070 | INFO     | . log creation = 0 s
[2026-01-09 19:13:12] 2026-01-10 00:12:40,070 | INFO     | ..............................
[2026-01-09 19:13:12] 2026-01-10 00:12:40,198 | INFO     | 
[2026-01-09 19:13:12] 2026-01-10 00:12:40,198 | INFO     | job summary report
[2026-01-09 19:13:12] 2026-01-10 00:12:40,198 | INFO     | --------------------------------------------------
[2026-01-09 19:13:12] 2026-01-10 00:12:40,198 | INFO     | PanDA job id: 6963192083
[2026-01-09 19:13:12] 2026-01-10 00:12:40,198 | INFO     | task id: 47898826
[2026-01-09 19:13:12] 2026-01-10 00:12:40,199 | INFO     | errors: (none)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,199 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:13:12] 2026-01-10 00:12:40,199 | INFO     | pilot state: finished 
[2026-01-09 19:13:12] 2026-01-10 00:12:40,199 | INFO     | transexitcode: 0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,199 | INFO     | exeerrorcode: 0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,199 | INFO     | exeerrordiag: 
[2026-01-09 19:13:12] 2026-01-10 00:12:40,200 | INFO     | exitcode: 0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,200 | INFO     | exitmsg: OK
[2026-01-09 19:13:12] 2026-01-10 00:12:40,200 | INFO     | cpuconsumptiontime: 121615 s
[2026-01-09 19:13:12] 2026-01-10 00:12:40,200 | INFO     | nevents: 400
[2026-01-09 19:13:12] 2026-01-10 00:12:40,200 | INFO     | neventsw: 0
[2026-01-09 19:13:12] 2026-01-10 00:12:40,200 | INFO     | pid: 28484
[2026-01-09 19:13:12] 2026-01-10 00:12:40,201 | INFO     | pgrp: 28484
[2026-01-09 19:13:12] 2026-01-10 00:12:40,201 | INFO     | corecount: 8
[2026-01-09 19:13:12] 2026-01-10 00:12:40,201 | INFO     | event service: False
[2026-01-09 19:13:12] 2026-01-10 00:12:40,201 | INFO     | sizes: {0: 2283969, 4: 2284231, 11: 2284259, 16079: 2315636, 16080: 2315635, 16082: 2324689, 16085: 2324873, 16088: 2325067}
[2026-01-09 19:13:12] 2026-01-10 00:12:40,201 | INFO     | --------------------------------------------------
[2026-01-09 19:13:12] 2026-01-10 00:12:40,206 | INFO     | 
[2026-01-09 19:13:12] 2026-01-10 00:12:40,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 19:13:12] 2026-01-10 00:12:40,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,224 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,225 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,225 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,227 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,228 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:13:12] 2026-01-10 00:12:40,228 | INFO     | job 6963192083 has completed (purged errors)
[2026-01-09 19:13:12] 2026-01-10 00:12:40,228 | INFO     | overall cleanup function is called
[2026-01-09 19:13:12] 2026-01-10 00:12:41,235 | INFO     | --- collectZombieJob: --- 10, [28484]
[2026-01-09 19:13:12] 2026-01-10 00:12:41,236 | INFO     | zombie collector waiting for pid 28484
[2026-01-09 19:13:12] 2026-01-10 00:12:41,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:13:12] 2026-01-10 00:12:41,236 | INFO     | collected zombie processes
[2026-01-09 19:13:12] 2026-01-10 00:12:41,236 | INFO     | will attempt to kill all subprocesses of pid=28484
[2026-01-09 19:13:12] 2026-01-10 00:12:41,405 | INFO     | process IDs to be killed: [28484] (in reverse order)
[2026-01-09 19:13:12] 2026-01-10 00:12:41,461 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:13:12] 2026-01-10 00:12:41,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:13:12] 2026-01-10 00:12:41,464 | INFO     | did not find any defunct processes belonging to 28484
[2026-01-09 19:13:12] 2026-01-10 00:12:41,466 | INFO     | did not find any defunct processes belonging to 28484
[2026-01-09 19:13:12] 2026-01-10 00:12:41,467 | INFO     | ready for new job
[2026-01-09 19:13:12] 2026-01-10 00:12:41,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:13:12] 2026-01-10 00:12:41,468 | INFO     | ***************************************
[2026-01-09 19:13:12] 2026-01-10 00:12:41,468 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:13:12] 2026-01-10 00:12:41,469 | INFO     | ***************************************
[2026-01-09 19:13:12] 2026-01-10 00:12:41,469 | INFO     | 
[2026-01-09 19:13:12] 2026-01-10 00:12:41,469 | INFO     | architecture information:
[2026-01-09 19:13:12] 2026-01-10 00:12:41,470 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:13:12] 2026-01-10 00:12:41,480 | INFO     | cat /etc/os-release:
[2026-01-09 19:13:12] NAME="CentOS Linux"
[2026-01-09 19:13:12] VERSION="7 (Core)"
[2026-01-09 19:13:12] ID="centos"
[2026-01-09 19:13:12] ID_LIKE="rhel fedora"
[2026-01-09 19:13:12] VERSION_ID="7"
[2026-01-09 19:13:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:13:12] ANSI_COLOR="0;31"
[2026-01-09 19:13:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:13:12] HOME_URL="https://www.centos.org/"
[2026-01-09 19:13:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:13:12] 
[2026-01-09 19:13:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:13:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:13:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:13:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:13:12] 
[2026-01-09 19:13:12] 2026-01-10 00:12:41,480 | INFO     | ***************************************
[2026-01-09 19:13:12] 2026-01-10 00:12:41,983 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 19:13:12] 2026-01-10 00:12:42,015 | INFO     | sufficient remaining disk space (26423066624 B)
[2026-01-09 19:13:12] 2026-01-10 00:12:42,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:13:12] 2026-01-10 00:12:42,016 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:13:12] 2026-01-10 00:12:42,016 | INFO     | update_server=False
[2026-01-09 19:13:12] 2026-01-10 00:12:42,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:13:12] 2026-01-10 00:12:42,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:13:12] 2026-01-10 00:12:42,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:13:12] 2026-01-10 00:12:42,017 | INFO     | aborting loop
[2026-01-09 19:13:12] 2026-01-10 00:12:42,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:13:12] 2026-01-10 00:12:42,052 | INFO     | all job control threads have been joined
[2026-01-09 19:13:12] 2026-01-10 00:12:42,481 | INFO     | all payload control threads have been joined
[2026-01-09 19:13:12] 2026-01-10 00:12:42,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:13:12] 2026-01-10 00:12:42,763 | INFO     | all data control threads have been joined
[2026-01-09 19:13:12] 2026-01-10 00:12:43,018 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,021 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,022 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,055 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,059 | INFO     | [job] control thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,062 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,062 | INFO     | [job] validate thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,108 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,153 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,186 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:13:12] 2026-01-10 00:12:43,486 | INFO     | [payload] control thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,768 | INFO     | [data] control thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:43,862 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:44,031 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:44,268 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:46,559 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:52,652 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:13:12] 2026-01-10 00:12:53,657 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:13:12] 2026-01-10 00:12:54,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402996979520)>', '<ExcThread(monitor, started 140402296329984)>']
[2026-01-09 19:13:12] 2026-01-10 00:12:59,651 | INFO     | all workflow threads have been joined
[2026-01-09 19:13:12] 2026-01-10 00:12:59,651 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:13:12] 2026-01-10 00:12:59,652 | INFO     | traces error code: 0
[2026-01-09 19:13:12] 2026-01-10 00:12:59,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:13:12] 2026-01-10 00:13:12,093 | INFO     | PID=22065 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 19:13:12] 2026-01-10 00:13:12,093 | INFO     | .. there are 3 such processes running
[2026-01-09 19:13:12] 2026-01-10 00:13:12,094 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:13:12] 2026-01-10 00:13:12,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:13:12] 2026-01-10 00:13:12,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:13:12] 2026-01-10 00:13:12,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:13:12] 2026-01-10 00:13:12,095 | INFO     | [monitor] control thread has ended
[2026-01-09 19:13:12] 2026-01-10 00:13:12,225 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:13:12] 2026-01-10 00:13:12,229 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:13:12] 2026-01-10 00:13:12,233 [wrapper] pilotpid: 22065
[2026-01-09 19:13:12] 2026-01-10 00:13:12,239 [wrapper] Pilot exit status: 0
[2026-01-09 19:13:12] 2026-01-10 00:13:12,246 [wrapper] pandaids: 6963192083
[2026-01-09 19:13:12] 2026-01-10 00:13:12,274 [wrapper] cleanup supervisor_pilot 16475 22066
[2026-01-09 19:13:12] 2026-01-10 00:13:12,276 [wrapper] Test setup, not cleaning
[2026-01-09 19:13:12] 2026-01-10 00:13:12,278 [wrapper] apfmon messages muted
[2026-01-09 19:13:12] 2026-01-10 00:13:12,280 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:13:12] 2026-01-10 00:13:12,282 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:13:12]  *** Error codes and diagnostics ***
[2026-01-09 19:13:12]     "exeErrorCode": 0,
[2026-01-09 19:13:12]     "exeErrorDiag": "",
[2026-01-09 19:13:12]     "pilotErrorCode": 0,
[2026-01-09 19:13:12]     "pilotErrorDiag": "",
[2026-01-09 19:13:12]  *** Listing of results directory ***
[2026-01-09 19:13:12] total 442392
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 19:13:12] -rwx------ 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas       100 Jan  9 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:13:12] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 14:44 run_atlas
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas       105 Jan  9 14:44 job.xml
[2026-01-09 19:13:12] -rw-r--r-- 2 boincer umatlas 224710881 Jan  9 14:44 EVNT.47898824._001497.pool.root.1
[2026-01-09 19:13:12] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 14:44 input.tar.gz
[2026-01-09 19:13:12] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:44 start_atlas.sh
[2026-01-09 19:13:12] drwxrwx--x 2 boincer umatlas      4096 Jan  9 14:44 shared
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas         0 Jan  9 14:44 boinc_lockfile
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 14:44 pandaJob.out
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas        57 Jan  9 14:44 setup.sh.local
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas    989364 Jan  9 14:44 agis_schedconf.cvmfs.json
[2026-01-09 19:13:12] drwx------ 5 boincer umatlas      4096 Jan  9 14:44 pilot3
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 19:01 init_data.xml
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas 218962320 Jan  9 19:11 HITS.47898826._038951.pool.root.1
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas       531 Jan  9 19:11 boinc_task_state.xml
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas      1053 Jan  9 19:12 memory_monitor_summary.json
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas   1516240 Jan  9 19:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas    473836 Jan  9 19:12 log.47898826._038951.job.log.tgz.1
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas      7855 Jan  9 19:12 heartbeat.json
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 19:12 boinc_mmap_file
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas        29 Jan  9 19:12 wrapper_checkpoint.txt
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas        95 Jan  9 19:13 pilot_heartbeat.json
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas       820 Jan  9 19:13 pilotlog.txt
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas   2236017 Jan  9 19:13 log.47898826._038951.job.log.1
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas       357 Jan  9 19:13 output.list
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas       620 Jan  9 19:13 runtime_log
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas   2734080 Jan  9 19:13 result.tar.gz
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas       663 Jan  9 19:13 UmGKDmsCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3DmKDmNmKKTn.diag
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 19:13 runtime_log.err
[2026-01-09 19:13:12] -rw-r--r-- 1 boincer umatlas     21062 Jan  9 19:13 stderr.txt
[2026-01-09 19:13:12] HITS file was successfully produced:
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas 218962320 Jan  9 19:11 shared/HITS.pool.root.1
[2026-01-09 19:13:12]  *** Contents of shared directory: ***
[2026-01-09 19:13:12] total 436552
[2026-01-09 19:13:12] -rw-r--r-- 2 boincer umatlas 224710881 Jan  9 14:44 ATLAS.root_0
[2026-01-09 19:13:12] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 14:44 input.tar.gz
[2026-01-09 19:13:12] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:44 start_atlas.sh
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas 218962320 Jan  9 19:11 HITS.pool.root.1
[2026-01-09 19:13:12] -rw------- 1 boincer umatlas   2734080 Jan  9 19:13 result.tar.gz
19:13:14 (18363): run_atlas exited; CPU time 121821.829665
19:13:14 (18363): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN