Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:54:45 (391271): wrapper (7.7.26015): starting
22:54:45 (391271): wrapper: running run_atlas (--nthreads 2)
[2026-01-09 22:54:45] Arguments: --nthreads 2
[2026-01-09 22:54:45] Threads: 2
[2026-01-09 22:54:45] Checking for CVMFS
[2026-01-09 22:54:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:54:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:54:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:54:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:54:45] 2.9.2.0 4183069 2086 55464 154957 1 57 21751315 36864001 0 130560 0 995366 99.985 78048 5137 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 22:54:45] CVMFS is ok
[2026-01-09 22:54:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 22:54:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 22:54:45] Further information can be found at the LHC@home message board.
[2026-01-09 22:54:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:54:45] Checking for apptainer binary...
[2026-01-09 22:54:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:54:45] Running /usr/bin/apptainer --version
[2026-01-09 22:54:45] apptainer version 1.4.1-1.1
[2026-01-09 22:54:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:54:45] thA389
[2026-01-09 22:54:45] apptainer works
[2026-01-09 22:54:45] Set ATHENA_PROC_NUMBER=2
[2026-01-09 22:54:45] Set ATHENA_CORE_NUMBER=2
[2026-01-09 22:54:45] Starting ATLAS job with PandaID=6963189619
[2026-01-09 22:54:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 01:48:34]  *** The last 200 lines of the pilot log: ***
[2026-01-10 01:48:34] 2026-01-10 00:48:04,059 | INFO     | update_server=False
[2026-01-10 01:48:34] 2026-01-10 00:48:04,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 01:48:34] 2026-01-10 00:48:04,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 01:48:34] 2026-01-10 00:48:04,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:48:34] 2026-01-10 00:48:04,160 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 01:48:34] 2026-01-10 00:48:04,160 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 01:48:34] 2026-01-10 00:48:04,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:48:34] 2026-01-10 00:48:04,161 | INFO     | will abort loop
[2026-01-10 01:48:34] 2026-01-10 00:48:04,375 | INFO     | all job control threads have been joined
[2026-01-10 01:48:34] 2026-01-10 00:48:04,676 | INFO     | all payload control threads have been joined
[2026-01-10 01:48:34] 2026-01-10 00:48:04,932 | INFO     | all data control threads have been joined
[2026-01-10 01:48:34] 2026-01-10 00:48:05,065 | INFO     | [job] queue monitor thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,066 | INFO     | [job] retrieve thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,114 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,167 | INFO     | [job] job monitor thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,224 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,381 | INFO     | [job] control thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,490 | INFO     | [payload] failed_post thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 01:48:34] 2026-01-10 00:48:05,682 | INFO     | [payload] control thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,760 | INFO     | [data] copytool_in thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:05,938 | INFO     | [data] control thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:06,061 | INFO     | [payload] validate_post thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:06,065 | INFO     | [data] copytool_out thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:06,289 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:06,431 | INFO     | [job] validate thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:09,611 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:11,677 | INFO     | [monitor] cgroup control has ended
[2026-01-10 01:48:34] 2026-01-10 00:48:14,180 | INFO     | job.realtimelogging is not enabled
[2026-01-10 01:48:34] 2026-01-10 00:48:15,186 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 01:48:34] 2026-01-10 00:48:15,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455351940928)>', '<ExcThread(monitor, started 140454859355904)>']
[2026-01-10 01:48:34] 2026-01-10 00:48:20,453 | INFO     | all workflow threads have been joined
[2026-01-10 01:48:34] 2026-01-10 00:48:20,453 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 01:48:34] 2026-01-10 00:48:20,454 | INFO     | traces error code: 0
[2026-01-10 01:48:34] 2026-01-10 00:48:20,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 01:48:34] 2026-01-10 00:48:34,059 | INFO     | PID=394985 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 01:48:34] 2026-01-10 00:48:34,059 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 01:48:34] 2026-01-10 00:48:34,059 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 01:48:34] 2026-01-10 00:48:34,059 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 01:48:34] 2026-01-10 00:48:34,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 01:48:34] 2026-01-10 00:48:34,059 | INFO     | [monitor] control thread has ended
[2026-01-10 01:48:34] 2026-01-10 00:48:34,097 [wrapper] ==== pilot stdout END ====
[2026-01-10 01:48:34] 2026-01-10 00:48:34,099 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 01:48:34] 2026-01-10 00:48:34,101 [wrapper] pilotpid: 394985
[2026-01-10 01:48:34] 2026-01-10 00:48:34,103 [wrapper] Pilot exit status: 0
[2026-01-10 01:48:34] 2026-01-10 00:48:34,108 [wrapper] pandaids: 6963189619
[2026-01-10 01:48:34] 2026-01-10 00:48:34,120 [wrapper] cleanup supervisor_pilot  421520 394986
[2026-01-10 01:48:34] 2026-01-10 00:48:34,122 [wrapper] Test setup, not cleaning
[2026-01-10 01:48:34] 2026-01-10 00:48:34,124 [wrapper] apfmon messages muted
[2026-01-10 01:48:34] 2026-01-10 00:48:34,126 [wrapper] ==== wrapper stdout END ====
[2026-01-10 01:48:34] 2026-01-10 00:48:34,128 [wrapper] ==== wrapper stderr END ====
[2026-01-10 01:48:34]  *** Error codes and diagnostics ***
[2026-01-10 01:48:34]     "exeErrorCode": 0,
[2026-01-10 01:48:34]     "exeErrorDiag": "",
[2026-01-10 01:48:34]     "pilotErrorCode": 0,
[2026-01-10 01:48:34]     "pilotErrorDiag": "",
[2026-01-10 01:48:34]  *** Listing of results directory ***
[2026-01-10 01:48:34] total 441780
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 01:48:34] -rwx------ 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc       100 Jan  9 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 01:48:34] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 22:54 run_atlas
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc       105 Jan  9 22:54 job.xml
[2026-01-10 01:48:34] -rw-r--r-- 2 boinc boinc 225000748 Jan  9 22:54 EVNT.47898824._001478.pool.root.1
[2026-01-10 01:48:34] -rw-r--r-- 2 boinc boinc    592401 Jan  9 22:54 input.tar.gz
[2026-01-10 01:48:34] -rw-r--r-- 2 boinc boinc     15847 Jan  9 22:54 start_atlas.sh
[2026-01-10 01:48:34] drwxrwx--x 2 boinc boinc      4096 Jan  9 22:54 shared
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc         0 Jan  9 22:54 boinc_setup_complete
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc      6281 Jan  9 22:54 init_data.xml
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc         0 Jan  9 22:54 boinc_lockfile
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc      2520 Jan  9 22:54 pandaJob.out
[2026-01-10 01:48:34] -rw------- 1 boinc boinc    989398 Jan  9 22:54 agis_schedconf.cvmfs.json
[2026-01-10 01:48:34] -rw------- 1 boinc boinc   1516240 Jan  9 22:54 agis_ddmendpoints.agis.ALL.json
[2026-01-10 01:48:34] drwx------ 5 boinc boinc      4096 Jan  9 22:54 pilot3
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc       530 Jan 10 01:47 boinc_task_state.xml
[2026-01-10 01:48:34] -rw------- 1 boinc boinc 219899897 Jan 10 01:47 HITS.47898826._038488.pool.root.1
[2026-01-10 01:48:34] -rw------- 1 boinc boinc        95 Jan 10 01:47 pilot_heartbeat.json
[2026-01-10 01:48:34] -rw------- 1 boinc boinc      1015 Jan 10 01:47 memory_monitor_summary.json
[2026-01-10 01:48:34] -rw------- 1 boinc boinc    318661 Jan 10 01:47 log.47898826._038488.job.log.tgz.1
[2026-01-10 01:48:34] -rw------- 1 boinc boinc      7757 Jan 10 01:48 heartbeat.json
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc      8192 Jan 10 01:48 boinc_mmap_file
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc        28 Jan 10 01:48 wrapper_checkpoint.txt
[2026-01-10 01:48:34] -rw------- 1 boinc boinc       746 Jan 10 01:48 pilotlog.txt
[2026-01-10 01:48:34] -rw------- 1 boinc boinc   1477751 Jan 10 01:48 log.47898826._038488.job.log.1
[2026-01-10 01:48:34] -rw------- 1 boinc boinc       357 Jan 10 01:48 output.list
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc       620 Jan 10 01:48 runtime_log
[2026-01-10 01:48:34] -rw------- 1 boinc boinc   1812480 Jan 10 01:48 result.tar.gz
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc      8898 Jan 10 01:48 runtime_log.err
[2026-01-10 01:48:34] -rw------- 1 boinc boinc       661 Jan 10 01:48 dInNDmeCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWygKDmGkWtrn.diag
[2026-01-10 01:48:34] -rw-r--r-- 1 boinc boinc      7733 Jan 10 01:48 stderr.txt
[2026-01-10 01:48:34] HITS file was successfully produced:
[2026-01-10 01:48:34] -rw------- 1 boinc boinc 219899897 Jan 10 01:47 shared/HITS.pool.root.1
[2026-01-10 01:48:34]  *** Contents of shared directory: ***
[2026-01-10 01:48:34] total 436852
[2026-01-10 01:48:34] -rw-r--r-- 2 boinc boinc 225000748 Jan  9 22:54 ATLAS.root_0
[2026-01-10 01:48:34] -rw-r--r-- 2 boinc boinc    592401 Jan  9 22:54 input.tar.gz
[2026-01-10 01:48:34] -rw-r--r-- 2 boinc boinc     15847 Jan  9 22:54 start_atlas.sh
[2026-01-10 01:48:34] -rw------- 1 boinc boinc 219899897 Jan 10 01:47 HITS.pool.root.1
[2026-01-10 01:48:34] -rw------- 1 boinc boinc   1812480 Jan 10 01:48 result.tar.gz
01:48:35 (391271): run_atlas exited; CPU time 20328.007654
01:48:35 (391271): called boinc_finish(0)

</stderr_txt>
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