Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:55:24 (9151): wrapper (7.7.26015): starting
22:55:24 (9151): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 22:55:24] Arguments: --nthreads 8
[2026-01-09 22:55:24] Threads: 8
[2026-01-09 22:55:24] Checking for CVMFS
[2026-01-09 22:55:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:55:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:55:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:55:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:55:27] 2.11.2.0 32209 35965 121396 154957 3 134 20326880 25165825 930 130560 0 17504937 99.829 9873456 4069 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 22:55:27] CVMFS is ok
[2026-01-09 22:55:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:55:27] Checking for apptainer binary...
[2026-01-09 22:55:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:55:27] Running /usr/bin/apptainer --version
[2026-01-09 22:55:27] apptainer version 1.3.2-1.el7
[2026-01-09 22:55:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:55:43] cg-vwn500.simple-grid.lan
[2026-01-09 22:55:43] apptainer works
[2026-01-09 22:55:44] Set ATHENA_PROC_NUMBER=8
[2026-01-09 22:55:44] Set ATHENA_CORE_NUMBER=8
[2026-01-09 22:55:44] Starting ATLAS job with PandaID=6963193836
[2026-01-09 22:55:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:02:37]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:02:37] 2026-01-10 04:01:40,100 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 05:02:37] 2026-01-10 04:01:40,100 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-10 05:02:37] 2026-01-10 04:01:40,102 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963193836/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,103 | INFO     | extracted standard info from prmon json
[2026-01-10 05:02:37] 2026-01-10 04:01:40,103 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:02:37] 2026-01-10 04:01:40,103 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:02:37] 2026-01-10 04:01:40,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 05:02:37] 2026-01-10 04:01:40,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 05:02:37] 2026-01-10 04:01:40,110 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:02:37] 2026-01-10 04:01:40,111 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,115 | INFO     | sum of deviations: 210825501421.00003
[2026-01-10 05:02:37] 2026-01-10 04:01:40,115 | INFO     | mean x: 1768007040.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,115 | INFO     | mean y: 2432903.9710144927
[2026-01-10 05:02:37] 2026-01-10 04:01:40,115 | INFO     | intersect: -29271095460.701035
[2026-01-10 05:02:37] 2026-01-10 04:01:40,116 | INFO     | chi2: 8.42540418094886
[2026-01-10 05:02:37] 2026-01-10 04:01:40,116 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,120 | INFO     | sum of deviations: 230556943616.5
[2026-01-10 05:02:37] 2026-01-10 04:01:40,120 | INFO     | mean x: 1768006887.5
[2026-01-10 05:02:37] 2026-01-10 04:01:40,120 | INFO     | mean y: 2438343.620588235
[2026-01-10 05:02:37] 2026-01-10 04:01:40,120 | INFO     | intersect: -33444066488.196766
[2026-01-10 05:02:37] 2026-01-10 04:01:40,121 | INFO     | chi2: 7.6988352485976295
[2026-01-10 05:02:37] 2026-01-10 04:01:40,121 | INFO     | current chi2=7.6988352485976295 (change=8.623549882557741 %)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,121 | INFO     | right removable region: 339
[2026-01-10 05:02:37] 2026-01-10 04:01:40,122 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,125 | INFO     | sum of deviations: 91504942921.5
[2026-01-10 05:02:37] 2026-01-10 04:01:40,126 | INFO     | mean x: 1768007192.5
[2026-01-10 05:02:37] 2026-01-10 04:01:40,126 | INFO     | mean y: 2466235.279411765
[2026-01-10 05:02:37] 2026-01-10 04:01:40,126 | INFO     | intersect: -13272002950.182352
[2026-01-10 05:02:37] 2026-01-10 04:01:40,126 | INFO     | chi2: 3.6260602934953012
[2026-01-10 05:02:37] 2026-01-10 04:01:40,127 | INFO     | current chi2=3.6260602934953012 (change=56.96277335045381 %)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,127 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,131 | INFO     | sum of deviations: 1716096530.0000038
[2026-01-10 05:02:37] 2026-01-10 04:01:40,131 | INFO     | mean x: 1768007345.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,131 | INFO     | mean y: 2492046.0358208953
[2026-01-10 05:02:37] 2026-01-10 04:01:40,131 | INFO     | intersect: -257773573.62964365
[2026-01-10 05:02:37] 2026-01-10 04:01:40,132 | INFO     | chi2: 1.02182991583576
[2026-01-10 05:02:37] 2026-01-10 04:01:40,132 | INFO     | current chi2=1.02182991583576 (change=71.81983108033822 %)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,132 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 05:02:37] 2026-01-10 04:01:40,136 | INFO     | sum of deviations: -21401895018.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,136 | INFO     | mean x: 1768007497.5
[2026-01-10 05:02:37] 2026-01-10 04:01:40,136 | INFO     | mean y: 2498879.624242424
[2026-01-10 05:02:37] 2026-01-10 04:01:40,136 | INFO     | intersect: 3398126645.991266
[2026-01-10 05:02:37] 2026-01-10 04:01:40,137 | INFO     | chi2: 0.8246138409257725
[2026-01-10 05:02:37] 2026-01-10 04:01:40,137 | INFO     | current chi2=0.8246138409257725 (change=19.30028391747402 %)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,137 | INFO     | left removable region: 30
[2026-01-10 05:02:37] 2026-01-10 04:01:40,138 | INFO     | sum of square deviations: 9148487810.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,141 | INFO     | sum of deviations: -1723901784.9999986
[2026-01-10 05:02:37] 2026-01-10 04:01:40,141 | INFO     | mean x: 1768007772.0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,141 | INFO     | mean y: 2506330.4563106797
[2026-01-10 05:02:37] 2026-01-10 04:01:40,141 | INFO     | intersect: 335662128.15143496
[2026-01-10 05:02:37] 2026-01-10 04:01:40,142 | INFO     | chi2: 0.017426659114403838
[2026-01-10 05:02:37] 2026-01-10 04:01:40,142 | INFO     | current memory leak: -0.19 B/s (using 309 data points, chi2=0.02)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,143 | INFO     | could have reported an average CPU frequency of 2249 MHz (15 samples)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,143 | INFO     | ..............................
[2026-01-10 05:02:37] 2026-01-10 04:01:40,143 | INFO     | . Timing measurements:
[2026-01-10 05:02:37] 2026-01-10 04:01:40,143 | INFO     | . get job = 0 s
[2026-01-10 05:02:37] 2026-01-10 04:01:40,143 | INFO     | . initial setup = 13 s
[2026-01-10 05:02:37] 2026-01-10 04:01:40,143 | INFO     | . payload setup = 151 s
[2026-01-10 05:02:37] 2026-01-10 04:01:40,143 | INFO     | . stage-in = 0 s
[2026-01-10 05:02:37] 2026-01-10 04:01:40,143 | INFO     | . payload execution = 21232 s
[2026-01-10 05:02:37] 2026-01-10 04:01:40,144 | INFO     | . stage-out = 4 s
[2026-01-10 05:02:37] 2026-01-10 04:01:40,144 | INFO     | . log creation = 1 s
[2026-01-10 05:02:37] 2026-01-10 04:01:40,144 | INFO     | ..............................
[2026-01-10 05:02:37] 2026-01-10 04:01:40,144 | INFO     | time since job start (21712s) is within the limit (349056.0s)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,438 | INFO     | 
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | job summary report
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | --------------------------------------------------
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | PanDA job id: 6963193836
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | task id: 47898826
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | errors: (none)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | pilot state: finished 
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | transexitcode: 0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,439 | INFO     | exeerrorcode: 0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | exeerrordiag: 
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | exitcode: 0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | exitmsg: OK
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | cpuconsumptiontime: 77044 s
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | nevents: 400
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | neventsw: 0
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | pid: 19397
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | pgrp: 19397
[2026-01-10 05:02:37] 2026-01-10 04:01:40,440 | INFO     | corecount: 8
[2026-01-10 05:02:37] 2026-01-10 04:01:40,441 | INFO     | event service: False
[2026-01-10 05:02:37] 2026-01-10 04:01:40,441 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 23: 2284083, 34: 2284111, 45: 2284267, 56: 2284295, 66: 2284323, 77: 2284351, 88: 2284407, 99: 2284715, 10
[2026-01-10 05:02:37] 2026-01-10 04:01:40,441 | INFO     | --------------------------------------------------
[2026-01-10 05:02:37] 2026-01-10 04:01:40,441 | INFO     | 
[2026-01-10 05:02:37] 2026-01-10 04:01:40,441 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-10 05:02:37] 2026-01-10 04:01:40,926 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,926 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | job 6963193836 has completed (purged errors)
[2026-01-10 05:02:37] 2026-01-10 04:01:40,928 | INFO     | overall cleanup function is called
[2026-01-10 05:02:37] 2026-01-10 04:01:41,937 | INFO     | --- collectZombieJob: --- 10, [19397]
[2026-01-10 05:02:37] 2026-01-10 04:01:41,938 | INFO     | zombie collector waiting for pid 19397
[2026-01-10 05:02:37] 2026-01-10 04:01:41,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:02:37] 2026-01-10 04:01:41,938 | INFO     | collected zombie processes
[2026-01-10 05:02:37] 2026-01-10 04:01:41,938 | INFO     | will attempt to kill all subprocesses of pid=19397
[2026-01-10 05:02:37] 2026-01-10 04:01:42,034 | INFO     | process IDs to be killed: [19397] (in reverse order)
[2026-01-10 05:02:37] 2026-01-10 04:01:43,128 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:02:37] 2026-01-10 04:01:43,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:02:37] 2026-01-10 04:01:43,131 | INFO     | did not find any defunct processes belonging to 19397
[2026-01-10 05:02:37] 2026-01-10 04:01:43,133 | INFO     | did not find any defunct processes belonging to 19397
[2026-01-10 05:02:37] 2026-01-10 04:01:43,133 | INFO     | ready for new job
[2026-01-10 05:02:37] 2026-01-10 04:01:43,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:02:37] 2026-01-10 04:01:43,136 | INFO     | ***************************************
[2026-01-10 05:02:37] 2026-01-10 04:01:43,136 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:02:37] 2026-01-10 04:01:43,136 | INFO     | ***************************************
[2026-01-10 05:02:37] 2026-01-10 04:01:43,136 | INFO     | 
[2026-01-10 05:02:37] 2026-01-10 04:01:43,137 | INFO     | pilot is running in a VM
[2026-01-10 05:02:37] 2026-01-10 04:01:43,137 | INFO     | architecture information:
[2026-01-10 05:02:37] 2026-01-10 04:01:43,137 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:02:37] 2026-01-10 04:01:43,439 | INFO     | cat /etc/os-release:
[2026-01-10 05:02:37] NAME="CentOS Linux"
[2026-01-10 05:02:37] VERSION="7 (Core)"
[2026-01-10 05:02:37] ID="centos"
[2026-01-10 05:02:37] ID_LIKE="rhel fedora"
[2026-01-10 05:02:37] VERSION_ID="7"
[2026-01-10 05:02:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:02:37] ANSI_COLOR="0;31"
[2026-01-10 05:02:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:02:37] HOME_URL="https://www.centos.org/"
[2026-01-10 05:02:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:02:37] 
[2026-01-10 05:02:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:02:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:02:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:02:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:02:37] 
[2026-01-10 05:02:37] 2026-01-10 04:01:43,439 | INFO     | ***************************************
[2026-01-10 05:02:37] 2026-01-10 04:01:43,946 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-10 05:02:37] 2026-01-10 04:01:44,221 | INFO     | sufficient remaining disk space (495317942272 B)
[2026-01-10 05:02:37] 2026-01-10 04:01:44,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:02:37] 2026-01-10 04:01:44,221 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:02:37] 2026-01-10 04:01:44,222 | INFO     | update_server=False
[2026-01-10 05:02:37] 2026-01-10 04:01:44,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:02:37] 2026-01-10 04:01:44,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:02:37] 2026-01-10 04:01:44,414 | INFO     | aborting loop
[2026-01-10 05:02:37] 2026-01-10 04:01:44,624 | INFO     | all job control threads have been joined
[2026-01-10 05:02:37] 2026-01-10 04:01:44,938 | INFO     | all data control threads have been joined
[2026-01-10 05:02:37] 2026-01-10 04:01:45,056 | INFO     | all payload control threads have been joined
[2026-01-10 05:02:37] 2026-01-10 04:01:45,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:02:37] 2026-01-10 04:01:45,227 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:45,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:02:37] 2026-01-10 04:01:45,384 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:45,419 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:45,630 | INFO     | [job] control thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:45,713 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:45,944 | INFO     | [data] control thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:46,062 | INFO     | [payload] control thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:46,113 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:46,297 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:46,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:02:37] 2026-01-10 04:01:46,573 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:46,574 | INFO     | [job] validate thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:46,675 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:46,676 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:46,696 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:47,067 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:01:50,562 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:02:37] 2026-01-10 04:02:13,302 | INFO     | PID=12890 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 05:02:37] 2026-01-10 04:02:13,303 | INFO     | .. there are 2 such processes running
[2026-01-10 05:02:37] 2026-01-10 04:02:13,304 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:02:37] 2026-01-10 04:02:13,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:02:37] 2026-01-10 04:02:13,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:02:37] 2026-01-10 04:02:26,000 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:02:37] 2026-01-10 04:02:26,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329111058240)>', '<ExcThread(monitor, started 140328459826944)>']
[2026-01-10 05:02:37] 2026-01-10 04:02:27,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:02:37] 2026-01-10 04:02:27,388 | INFO     | [monitor] control thread has ended
[2026-01-10 05:02:37] 2026-01-10 04:02:31,614 | INFO     | all workflow threads have been joined
[2026-01-10 05:02:37] 2026-01-10 04:02:31,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:02:37] 2026-01-10 04:02:31,615 | INFO     | traces error code: 0
[2026-01-10 05:02:37] 2026-01-10 04:02:31,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:02:37] 2026-01-10 04:02:32,023 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:02:37] 2026-01-10 04:02:32,077 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:02:37] 2026-01-10 04:02:32,185 [wrapper] pilotpid: 12890
[2026-01-10 05:02:37] 2026-01-10 04:02:32,271 [wrapper] Pilot exit status: 0
[2026-01-10 05:02:37] 2026-01-10 04:02:32,725 [wrapper] pandaids: 6963193836
[2026-01-10 05:02:37] 2026-01-10 04:02:33,622 [wrapper] cleanup supervisor_pilot 20310 12891
[2026-01-10 05:02:37] 2026-01-10 04:02:33,731 [wrapper] Test setup, not cleaning
[2026-01-10 05:02:37] 2026-01-10 04:02:33,829 [wrapper] apfmon messages muted
[2026-01-10 05:02:37] 2026-01-10 04:02:33,953 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:02:37] 2026-01-10 04:02:34,016 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:02:37]  *** Error codes and diagnostics ***
[2026-01-10 05:02:37]     "exeErrorCode": 0,
[2026-01-10 05:02:37]     "exeErrorDiag": "",
[2026-01-10 05:02:37]     "pilotErrorCode": 0,
[2026-01-10 05:02:37]     "pilotErrorDiag": "",
[2026-01-10 05:02:37]  *** Listing of results directory ***
[2026-01-10 05:02:37] total 443368
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 05:02:37] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc       100 Jan  9 22:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:02:37] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 22:55 run_atlas
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc       105 Jan  9 22:55 job.xml
[2026-01-10 05:02:37] -rw-r--r--. 2 boinc boinc 223988559 Jan  9 22:55 EVNT.47898824._001511.pool.root.1
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc      6391 Jan  9 22:55 init_data.xml
[2026-01-10 05:02:37] -rw-r--r--. 2 boinc boinc     15847 Jan  9 22:55 start_atlas.sh
[2026-01-10 05:02:37] drwxrwx--x. 2 boinc boinc        68 Jan  9 22:55 shared
[2026-01-10 05:02:37] -rw-r--r--. 2 boinc boinc    592402 Jan  9 22:55 input.tar.gz
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc         0 Jan  9 22:55 boinc_lockfile
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc      2520 Jan  9 22:55 pandaJob.out
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc    989398 Jan  9 22:59 agis_schedconf.cvmfs.json
[2026-01-10 05:02:37] drwx------. 5 boinc boinc      4096 Jan  9 22:59 pilot3
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc 219214621 Jan 10 04:58 HITS.47898826._039309.pool.root.1
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc       531 Jan 10 04:58 boinc_task_state.xml
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc      1016 Jan 10 04:59 memory_monitor_summary.json
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc   1516240 Jan 10 04:59 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc    552668 Jan 10 04:59 log.47898826._039309.job.log.tgz.1
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc      7782 Jan 10 05:01 heartbeat.json
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc      8192 Jan 10 05:02 boinc_mmap_file
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc        28 Jan 10 05:02 wrapper_checkpoint.txt
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc        95 Jan 10 05:02 pilot_heartbeat.json
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc      4884 Jan 10 05:02 pilotlog.txt
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc   2901663 Jan 10 05:02 log.47898826._039309.job.log.1
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc       357 Jan 10 05:02 output.list
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc       620 Jan 10 05:02 runtime_log
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc   3471360 Jan 10 05:02 result.tar.gz
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc      8817 Jan 10 05:02 runtime_log.err
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc       657 Jan 10 05:02 iaCODm4CJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRFmKDmsLulAo.diag
[2026-01-10 05:02:37] -rw-r--r--. 1 boinc boinc     20776 Jan 10 05:02 stderr.txt
[2026-01-10 05:02:37] HITS file was successfully produced:
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc 219214621 Jan 10 04:58 shared/HITS.pool.root.1
[2026-01-10 05:02:37]  *** Contents of shared directory: ***
[2026-01-10 05:02:37] total 436808
[2026-01-10 05:02:37] -rw-r--r--. 2 boinc boinc 223988559 Jan  9 22:55 ATLAS.root_0
[2026-01-10 05:02:37] -rw-r--r--. 2 boinc boinc     15847 Jan  9 22:55 start_atlas.sh
[2026-01-10 05:02:37] -rw-r--r--. 2 boinc boinc    592402 Jan  9 22:55 input.tar.gz
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc 219214621 Jan 10 04:58 HITS.pool.root.1
[2026-01-10 05:02:37] -rw-------. 1 boinc boinc   3471360 Jan 10 05:02 result.tar.gz
05:02:38 (9151): run_atlas exited; CPU time 77259.849322
05:02:38 (9151): called boinc_finish(0)

</stderr_txt>
]]>

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