Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:44:40 (3301): wrapper (7.7.26015): starting
20:44:40 (3301): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 20:44:40] Arguments: --nthreads 12
[2026-01-09 20:44:40] Threads: 12
[2026-01-09 20:44:40] Checking for CVMFS
[2026-01-09 20:44:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:44:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:44:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:44:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:44:45] 2.13.3.0 3525 0 25460 154955 3 1 3968358 4096000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 20:44:45] CVMFS is ok
[2026-01-09 20:44:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:44:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:44:45] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 20:44:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 20:44:45] Further information can be found at the LHC@home message board.
[2026-01-09 20:44:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:44:45] Checking for apptainer binary...
[2026-01-09 20:44:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:44:45] Running /usr/bin/apptainer --version
[2026-01-09 20:44:45] apptainer version 1.4.5
[2026-01-09 20:44:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:44:45] perseverance
[2026-01-09 20:44:45] apptainer works
[2026-01-09 20:44:45] Set ATHENA_PROC_NUMBER=12
[2026-01-09 20:44:45] Set ATHENA_CORE_NUMBER=12
[2026-01-09 20:44:45] Starting ATLAS job with PandaID=6963194251
[2026-01-09 20:44:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:40:05]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:40:05]  scope=mc23_13p6TeV
[2026-01-09 21:40:05]  status=None
[2026-01-09 21:40:05]  status_code=0
[2026-01-09 21:40:05]  storage_token=
[2026-01-09 21:40:05]  surl=/var/lib/boinc-client/slots/13/PanDA_Pilot-6963194251/log.47898826._039314.job.log.tgz.1
[2026-01-09 21:40:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/b4/log.47898826._039314.job.log.tgz.1
[2026-01-09 21:40:05]  workdir=None
[2026-01-09 21:40:05] ]
[2026-01-09 21:40:05] 2026-01-09 20:38:50,499 | INFO     | transferring file log.47898826._039314.job.log.tgz.1 from /var/lib/boinc-client/slots/13/PanDA_Pilot-6963194251/log.47898826._039314.job.log.tgz.1 to /var/lib/boin
[2026-01-09 21:40:05] 2026-01-09 20:38:50,499 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-6963194251/log.47898826._039314.job.log.tgz.1 /var/lib/boinc-client/slots/13/log.4789
[2026-01-09 21:40:05] 2026-01-09 20:38:50,508 | INFO     | adding to output.list: log.47898826._039314.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/b4/log.47898826._039314.job.log.tg
[2026-01-09 21:40:05] 2026-01-09 20:38:50,508 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 21:40:05] 2026-01-09 20:38:50,508 | INFO     | summary of transferred files:
[2026-01-09 21:40:05] 2026-01-09 20:38:50,508 | INFO     |  -- lfn=log.47898826._039314.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 21:40:05] 2026-01-09 20:38:50,509 | INFO     | stage-out finished correctly
[2026-01-09 21:40:05] 2026-01-09 20:38:50,839 | INFO     | monitor loop #247: job 0:6963194251 is in state 'finished'
[2026-01-09 21:40:05] 2026-01-09 20:38:50,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:40:05] 2026-01-09 20:38:51,528 | INFO     | PID=7626 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 21:40:05] 2026-01-09 20:38:52,529 | INFO     | time since job start (3239s) is within the limit (349056.0s)
[2026-01-09 21:40:05] 2026-01-09 20:38:53,087 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 21:40:05] 2026-01-09 20:38:53,115 | INFO     | job 6963194251 has state=finished
[2026-01-09 21:40:05] 2026-01-09 20:38:53,115 | INFO     | preparing for final server update for job 6963194251 in state='finished'
[2026-01-09 21:40:05] 2026-01-09 20:38:53,115 | INFO     | this job has now completed (state=finished)
[2026-01-09 21:40:05] 2026-01-09 20:38:53,115 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 21:40:05] 2026-01-09 20:38:53,115 | INFO     | log transfer has been attempted: DONE
[2026-01-09 21:40:05] 2026-01-09 20:38:53,115 | INFO     | job 6963194251 has finished - writing final server update
[2026-01-09 21:40:05] 2026-01-09 20:38:53,115 | INFO     | total number of processed events: 400 (read)
[2026-01-09 21:40:05] 2026-01-09 20:38:53,115 | INFO     | executing command: lscpu
[2026-01-09 21:40:05] 2026-01-09 20:38:53,127 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:40:05] 2026-01-09 20:38:53,341 | INFO     | monitor loop #248: job 0:6963194251 is in state 'finished'
[2026-01-09 21:40:05] 2026-01-09 20:38:53,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:40:05] 2026-01-09 20:38:54,534 | INFO     | time since job start (3241s) is within the limit (349056.0s)
[2026-01-09 21:40:05] 2026-01-09 20:38:55,844 | INFO     | monitor loop #249: job 0:6963194251 is in state 'finished'
[2026-01-09 21:40:05] 2026-01-09 20:38:55,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:40:05] 2026-01-09 20:38:56,538 | INFO     | time since job start (3243s) is within the limit (349056.0s)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,346 | INFO     | monitor loop #250: job 0:6963194251 is in state 'finished'
[2026-01-09 21:40:05] 2026-01-09 20:38:58,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,543 | INFO     | time since job start (3245s) is within the limit (349056.0s)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,703 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:40:05] 2026-01-09 20:38:58,704 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3745.6810000000005
[2026-01-09 21:40:05] 2026-01-09 20:38:58,705 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6963194251/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,705 | INFO     | extracted standard info from prmon json
[2026-01-09 21:40:05] 2026-01-09 20:38:58,705 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:40:05] 2026-01-09 20:38:58,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:40:05] 2026-01-09 20:38:58,705 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:40:05] 2026-01-09 20:38:58,705 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | sum of square deviations: 30168007.5
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | sum of deviations: -6335348675.0
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | mean x: 1767989588.5
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | mean y: 2927020.304347826
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | intersect: 371284672986.3669
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | chi2: 0.06246290975258916
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | current memory leak: -210.00 B/s (using 46 data points, chi2=0.06)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | could have reported an average CPU frequency of 3825 MHz (5 samples)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | ..............................
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | . Timing measurements:
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | . get job = 0 s
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | . initial setup = 1 s
[2026-01-09 21:40:05] 2026-01-09 20:38:58,706 | INFO     | . payload setup = 2 s
[2026-01-09 21:40:05] 2026-01-09 20:38:58,707 | INFO     | . stage-in = 0 s
[2026-01-09 21:40:05] 2026-01-09 20:38:58,707 | INFO     | . payload execution = 3218 s
[2026-01-09 21:40:05] 2026-01-09 20:38:58,707 | INFO     | . stage-out = 0 s
[2026-01-09 21:40:05] 2026-01-09 20:38:58,707 | INFO     | . log creation = 0 s
[2026-01-09 21:40:05] 2026-01-09 20:38:58,707 | INFO     | ..............................
[2026-01-09 21:40:05] 2026-01-09 20:38:58,736 | INFO     | 
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | job summary report
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | --------------------------------------------------
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | PanDA job id: 6963194251
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | task id: 47898826
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | errors: (none)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | pilot state: finished 
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | transexitcode: 0
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | exeerrorcode: 0
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | exeerrordiag: 
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | exitcode: 0
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | exitmsg: OK
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | cpuconsumptiontime: 34318 s
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | nevents: 400
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | neventsw: 0
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | pid: 14069
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | pgrp: 14069
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | corecount: 12
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | event service: False
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | sizes: {0: 2283979, 2: 2284241, 10: 2284269, 3224: 2318847, 3227: 2318847, 3232: 2319073}
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | --------------------------------------------------
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | 
[2026-01-09 21:40:05] 2026-01-09 20:38:58,737 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,748 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,748 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:40:05] 2026-01-09 20:38:58,748 | INFO     | job 6963194251 has completed (purged errors)
[2026-01-09 21:40:05] 2026-01-09 20:38:58,748 | INFO     | overall cleanup function is called
[2026-01-09 21:40:05] 2026-01-09 20:38:59,755 | INFO     | --- collectZombieJob: --- 10, [14069]
[2026-01-09 21:40:05] 2026-01-09 20:38:59,755 | INFO     | zombie collector waiting for pid 14069
[2026-01-09 21:40:05] 2026-01-09 20:38:59,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:40:05] 2026-01-09 20:38:59,755 | INFO     | collected zombie processes
[2026-01-09 21:40:05] 2026-01-09 20:38:59,755 | INFO     | will attempt to kill all subprocesses of pid=14069
[2026-01-09 21:40:05] 2026-01-09 20:38:59,789 | INFO     | process IDs to be killed: [14069] (in reverse order)
[2026-01-09 21:40:05] 2026-01-09 20:38:59,806 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:40:05] 2026-01-09 20:38:59,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:40:05] 2026-01-09 20:38:59,807 | INFO     | did not find any defunct processes belonging to 14069
[2026-01-09 21:40:05] 2026-01-09 20:38:59,808 | INFO     | did not find any defunct processes belonging to 14069
[2026-01-09 21:40:05] 2026-01-09 20:38:59,809 | INFO     | ready for new job
[2026-01-09 21:40:05] 2026-01-09 20:38:59,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:40:05] 2026-01-09 20:38:59,809 | INFO     | ***************************************
[2026-01-09 21:40:05] 2026-01-09 20:38:59,809 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:40:05] 2026-01-09 20:38:59,809 | INFO     | ***************************************
[2026-01-09 21:40:05] 2026-01-09 20:38:59,809 | INFO     | 
[2026-01-09 21:40:05] 2026-01-09 20:38:59,810 | INFO     | architecture information:
[2026-01-09 21:40:05] 2026-01-09 20:38:59,810 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:40:05] 2026-01-09 20:38:59,816 | INFO     | cat /etc/os-release:
[2026-01-09 21:40:05] NAME="CentOS Linux"
[2026-01-09 21:40:05] VERSION="7 (Core)"
[2026-01-09 21:40:05] ID="centos"
[2026-01-09 21:40:05] ID_LIKE="rhel fedora"
[2026-01-09 21:40:05] VERSION_ID="7"
[2026-01-09 21:40:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:40:05] ANSI_COLOR="0;31"
[2026-01-09 21:40:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:40:05] HOME_URL="https://www.centos.org/"
[2026-01-09 21:40:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:40:05] 
[2026-01-09 21:40:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:40:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:40:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:40:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:40:05] 
[2026-01-09 21:40:05] 2026-01-09 20:38:59,816 | INFO     | ***************************************
[2026-01-09 21:40:05] 2026-01-09 20:39:00,318 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2026-01-09 21:40:05] 2026-01-09 20:39:00,325 | INFO     | sufficient remaining disk space (148514013184 B)
[2026-01-09 21:40:05] 2026-01-09 20:39:00,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:40:05] 2026-01-09 20:39:00,325 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:40:05] 2026-01-09 20:39:00,325 | INFO     | update_server=False
[2026-01-09 21:40:05] 2026-01-09 20:39:00,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:40:05] 2026-01-09 20:39:00,325 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 21:40:05] 2026-01-09 20:39:00,325 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:40:05] 2026-01-09 20:39:00,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:40:05] 2026-01-09 20:39:00,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:40:05] 2026-01-09 20:39:00,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:40:05] 2026-01-09 20:39:00,326 | INFO     | aborting loop
[2026-01-09 21:40:05] 2026-01-09 20:39:00,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:40:05] 2026-01-09 20:39:00,626 | INFO     | all payload control threads have been joined
[2026-01-09 21:40:05] 2026-01-09 20:39:00,904 | INFO     | all job control threads have been joined
[2026-01-09 21:40:05] 2026-01-09 20:39:01,024 | INFO     | all data control threads have been joined
[2026-01-09 21:40:05] 2026-01-09 20:39:01,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:40:05] 2026-01-09 20:39:01,330 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:01,330 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:01,330 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:01,445 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:01,539 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:01,631 | INFO     | [payload] control thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:01,909 | INFO     | [job] control thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:02,028 | INFO     | [data] control thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:02,176 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:02,260 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:02,631 | INFO     | [job] validate thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:02,669 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:02,785 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:03,052 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:03,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:40:05] 2026-01-09 20:39:07,628 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:11,095 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:40:05] 2026-01-09 20:39:12,100 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:40:05] 2026-01-09 20:39:58,734 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:40:05] 2026-01-09 20:40:00,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895651940160)>', '<ExcThread(monitor, started 139895297255168)>']
[2026-01-09 21:40:05] 2026-01-09 20:40:00,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:40:05] 2026-01-09 20:40:00,618 | INFO     | [monitor] control thread has ended
[2026-01-09 21:40:05] 2026-01-09 20:40:05,604 | INFO     | all workflow threads have been joined
[2026-01-09 21:40:05] 2026-01-09 20:40:05,604 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:40:05] 2026-01-09 20:40:05,604 | INFO     | traces error code: 0
[2026-01-09 21:40:05] 2026-01-09 20:40:05,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:40:05] 2026-01-09 20:40:05,643 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:40:05] 2026-01-09 20:40:05,644 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:40:05] 2026-01-09 20:40:05,645 [wrapper] pilotpid: 7626
[2026-01-09 21:40:05] 2026-01-09 20:40:05,647 [wrapper] Pilot exit status: 0
[2026-01-09 21:40:05] 2026-01-09 20:40:05,653 [wrapper] pandaids: 6963194251
[2026-01-09 21:40:05] 2026-01-09 20:40:05,666 [wrapper] cleanup supervisor_pilot   23080 7627
[2026-01-09 21:40:05] 2026-01-09 20:40:05,668 [wrapper] Test setup, not cleaning
[2026-01-09 21:40:05] 2026-01-09 20:40:05,669 [wrapper] apfmon messages muted
[2026-01-09 21:40:05] 2026-01-09 20:40:05,670 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:40:05] 2026-01-09 20:40:05,672 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:40:05]  *** Error codes and diagnostics ***
[2026-01-09 21:40:05]     "exeErrorCode": 0,
[2026-01-09 21:40:05]     "exeErrorDiag": "",
[2026-01-09 21:40:05]     "pilotErrorCode": 0,
[2026-01-09 21:40:05]     "pilotErrorDiag": "",
[2026-01-09 21:40:05]  *** Listing of results directory ***
[2026-01-09 21:40:05] total 442116
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc    579449 ene  9 05:21 pilot3.tar.gz
[2026-01-09 21:40:05] -rwx------ 1 boinc boinc     36322 ene  9 05:23 runpilot2-wrapper.sh
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc      5112 ene  9 05:24 queuedata.json
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc       100 ene  9 20:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:40:05] -rwxr-xr-x 1 boinc boinc      7986 ene  9 20:44 run_atlas
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc       105 ene  9 20:44 job.xml
[2026-01-09 21:40:05] -rw-r--r-- 2 boinc boinc 223988559 ene  9 20:44 EVNT.47898824._001511.pool.root.1
[2026-01-09 21:40:05] drwxrwx--x 2 boinc boinc      4096 ene  9 20:44 shared
[2026-01-09 21:40:05] -rw-r--r-- 2 boinc boinc    592402 ene  9 20:44 input.tar.gz
[2026-01-09 21:40:05] -rw-r--r-- 2 boinc boinc     15847 ene  9 20:44 start_atlas.sh
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc         0 ene  9 20:44 boinc_setup_complete
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc         0 ene  9 20:44 boinc_lockfile
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc      2520 ene  9 20:44 pandaJob.out
[2026-01-09 21:40:05] -rw------- 1 boinc boinc    989364 ene  9 20:44 agis_schedconf.cvmfs.json
[2026-01-09 21:40:05] -rw------- 1 boinc boinc   1516240 ene  9 20:44 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:40:05] drwx------ 5 boinc boinc      4096 ene  9 20:44 pilot3
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc      8984 ene  9 21:37 init_data.xml
[2026-01-09 21:40:05] -rw------- 1 boinc boinc        95 ene  9 21:38 pilot_heartbeat.json
[2026-01-09 21:40:05] -rw------- 1 boinc boinc 223099438 ene  9 21:38 HITS.47898826._039314.pool.root.1
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc       529 ene  9 21:38 boinc_task_state.xml
[2026-01-09 21:40:05] -rw------- 1 boinc boinc      1010 ene  9 21:38 memory_monitor_summary.json
[2026-01-09 21:40:05] -rw------- 1 boinc boinc    366919 ene  9 21:38 log.47898826._039314.job.log.tgz.1
[2026-01-09 21:40:05] -rw------- 1 boinc boinc      7739 ene  9 21:38 heartbeat.json
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc      8192 ene  9 21:39 boinc_mmap_file
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc        27 ene  9 21:39 wrapper_checkpoint.txt
[2026-01-09 21:40:05] -rw------- 1 boinc boinc      4633 ene  9 21:40 pilotlog.txt
[2026-01-09 21:40:05] -rw------- 1 boinc boinc    494038 ene  9 21:40 log.47898826._039314.job.log.1
[2026-01-09 21:40:05] -rw------- 1 boinc boinc       357 ene  9 21:40 output.list
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc       620 ene  9 21:40 runtime_log
[2026-01-09 21:40:05] -rw------- 1 boinc boinc    880640 ene  9 21:40 result.tar.gz
[2026-01-09 21:40:05] -rw------- 1 boinc boinc       656 ene  9 21:40 UQGODm4CJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUFmKDmWu3UMn.diag
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc      8941 ene  9 21:40 runtime_log.err
[2026-01-09 21:40:05] -rw-r--r-- 1 boinc boinc     22168 ene  9 21:40 stderr.txt
[2026-01-09 21:40:05] HITS file was successfully produced:
[2026-01-09 21:40:05] -rw------- 1 boinc boinc 223099438 ene  9 21:38 shared/HITS.pool.root.1
[2026-01-09 21:40:05]  *** Contents of shared directory: ***
[2026-01-09 21:40:05] total 438076
[2026-01-09 21:40:05] -rw-r--r-- 2 boinc boinc 223988559 ene  9 20:44 ATLAS.root_0
[2026-01-09 21:40:05] -rw-r--r-- 2 boinc boinc    592402 ene  9 20:44 input.tar.gz
[2026-01-09 21:40:05] -rw-r--r-- 2 boinc boinc     15847 ene  9 20:44 start_atlas.sh
[2026-01-09 21:40:05] -rw------- 1 boinc boinc 223099438 ene  9 21:38 HITS.pool.root.1
[2026-01-09 21:40:05] -rw------- 1 boinc boinc    880640 ene  9 21:40 result.tar.gz
21:40:06 (3301): run_atlas exited; CPU time 34154.432093
21:40:06 (3301): called boinc_finish(0)

</stderr_txt>
]]>

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