Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:12:16 (18803): wrapper (7.7.26015): starting
14:12:16 (18803): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:12:16] Arguments: --nthreads 8
[2026-01-09 14:12:16] Threads: 8
[2026-01-09 14:12:16] Checking for CVMFS
[2026-01-09 14:12:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:12:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:12:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:12:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:12:16] 2.11.2.0 16446 181428 134888 154954 1 49 16759333 18432001 1859 130560 0 122567913 99.979 6967780 32377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:12:16] CVMFS is ok
[2026-01-09 14:12:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:12:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:12:16] Further information can be found at the LHC@home message board.
[2026-01-09 14:12:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:12:16] Checking for apptainer binary...
[2026-01-09 14:12:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:12:16] Running /usr/bin/apptainer --version
[2026-01-09 14:12:16] apptainer version 1.3.2-1.el7
[2026-01-09 14:12:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:12:17] c-206-26.aglt2.org
[2026-01-09 14:12:17] apptainer works
[2026-01-09 14:12:17] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:12:17] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:12:17] Starting ATLAS job with PandaID=6963193730
[2026-01-09 14:12:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:36:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:36:01] 2026-01-09 23:34:53,597 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:36:01] 2026-01-09 23:34:53,603 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2428.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,608 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963193730/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:36:01] 2026-01-09 23:34:53,609 | INFO     | extracted standard info from prmon json
[2026-01-09 18:36:01] 2026-01-09 23:34:53,609 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:36:01] 2026-01-09 23:34:53,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:36:01] 2026-01-09 23:34:53,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:36:01] 2026-01-09 23:34:53,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:36:01] 2026-01-09 23:34:53,617 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:36:01] 2026-01-09 23:34:53,618 | INFO     | sum of square deviations: 5325139844.5
[2026-01-09 18:36:01] 2026-01-09 23:34:53,621 | INFO     | sum of deviations: 43451697083.00001
[2026-01-09 18:36:01] 2026-01-09 23:34:53,621 | INFO     | mean x: 1767993812.5
[2026-01-09 18:36:01] 2026-01-09 23:34:53,621 | INFO     | mean y: 2487300.8604651163
[2026-01-09 18:36:01] 2026-01-09 23:34:53,621 | INFO     | intersect: -14423862772.314276
[2026-01-09 18:36:01] 2026-01-09 23:34:53,622 | INFO     | chi2: 1.3318177639926285
[2026-01-09 18:36:01] 2026-01-09 23:34:53,622 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,625 | INFO     | sum of deviations: 42240586369.000015
[2026-01-09 18:36:01] 2026-01-09 23:34:53,625 | INFO     | mean x: 1767993660.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,625 | INFO     | mean y: 2486694.5494071147
[2026-01-09 18:36:01] 2026-01-09 23:34:53,625 | INFO     | intersect: -14869789393.172333
[2026-01-09 18:36:01] 2026-01-09 23:34:53,626 | INFO     | chi2: 1.3320889016895272
[2026-01-09 18:36:01] 2026-01-09 23:34:53,626 | INFO     | current chi2=1.3320889016895272 (change=-0.020358468270151638 %)
[2026-01-09 18:36:01] 2026-01-09 23:34:53,626 | INFO     | right removable region: 252
[2026-01-09 18:36:01] 2026-01-09 23:34:53,627 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,629 | INFO     | sum of deviations: 7494559125.000001
[2026-01-09 18:36:01] 2026-01-09 23:34:53,629 | INFO     | mean x: 1767993965.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,630 | INFO     | mean y: 2505187.007905138
[2026-01-09 18:36:01] 2026-01-09 23:34:53,630 | INFO     | intersect: -2636216982.1742268
[2026-01-09 18:36:01] 2026-01-09 23:34:53,630 | INFO     | chi2: 0.03171375907451747
[2026-01-09 18:36:01] 2026-01-09 23:34:53,631 | INFO     | current chi2=0.03171375907451747 (change=97.61876137021603 %)
[2026-01-09 18:36:01] 2026-01-09 23:34:53,631 | INFO     | sum of square deviations: 4729621702.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,633 | INFO     | sum of deviations: 1925862536.9999998
[2026-01-09 18:36:01] 2026-01-09 23:34:53,634 | INFO     | mean x: 1767994117.5
[2026-01-09 18:36:01] 2026-01-09 23:34:53,634 | INFO     | mean y: 2508070.693548387
[2026-01-09 18:36:01] 2026-01-09 23:34:53,634 | INFO     | intersect: -717404398.223321
[2026-01-09 18:36:01] 2026-01-09 23:34:53,634 | INFO     | chi2: 0.002360436836994052
[2026-01-09 18:36:01] 2026-01-09 23:34:53,634 | INFO     | current chi2=0.002360436836994052 (change=92.5570575489088 %)
[2026-01-09 18:36:01] 2026-01-09 23:34:53,635 | INFO     | sum of square deviations: 4449281562.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,636 | INFO     | sum of deviations: 898052553.0000002
[2026-01-09 18:36:01] 2026-01-09 23:34:53,636 | INFO     | mean x: 1767994270.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,636 | INFO     | mean y: 2508629.0905349795
[2026-01-09 18:36:01] 2026-01-09 23:34:53,636 | INFO     | intersect: -354347134.1912026
[2026-01-09 18:36:01] 2026-01-09 23:34:53,637 | INFO     | chi2: 0.001845442162932721
[2026-01-09 18:36:01] 2026-01-09 23:34:53,637 | INFO     | current chi2=0.001845442162932721 (change=21.8177697445682 %)
[2026-01-09 18:36:01] 2026-01-09 23:34:53,637 | INFO     | left removable region: 30
[2026-01-09 18:36:01] 2026-01-09 23:34:53,637 | INFO     | sum of square deviations: 3392567795.5
[2026-01-09 18:36:01] 2026-01-09 23:34:53,638 | INFO     | sum of deviations: 1660759099.0
[2026-01-09 18:36:01] 2026-01-09 23:34:53,638 | INFO     | mean x: 1767994544.5
[2026-01-09 18:36:01] 2026-01-09 23:34:53,639 | INFO     | mean y: 2507682.225225225
[2026-01-09 18:36:01] 2026-01-09 23:34:53,639 | INFO     | intersect: -862976282.6510003
[2026-01-09 18:36:01] 2026-01-09 23:34:53,639 | INFO     | chi2: 0.0008133936253235415
[2026-01-09 18:36:01] 2026-01-09 23:34:53,639 | INFO     | current memory leak: 0.49 B/s (using 222 data points, chi2=0.00)
[2026-01-09 18:36:01] 2026-01-09 23:34:53,639 | INFO     | could have reported an average CPU frequency of 2574 MHz (12 samples)
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | ..............................
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | . Timing measurements:
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | . get job = 0 s
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | . initial setup = 2 s
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | . payload setup = 4 s
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | . stage-in = 0 s
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | . payload execution = 15712 s
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | . stage-out = 2 s
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | . log creation = 0 s
[2026-01-09 18:36:01] 2026-01-09 23:34:53,640 | INFO     | ..............................
[2026-01-09 18:36:01] 2026-01-09 23:34:54,011 | INFO     | 
[2026-01-09 18:36:01] 2026-01-09 23:34:54,011 | INFO     | job summary report
[2026-01-09 18:36:01] 2026-01-09 23:34:54,011 | INFO     | --------------------------------------------------
[2026-01-09 18:36:01] 2026-01-09 23:34:54,011 | INFO     | PanDA job id: 6963193730
[2026-01-09 18:36:01] 2026-01-09 23:34:54,011 | INFO     | task id: 47898826
[2026-01-09 18:36:01] 2026-01-09 23:34:54,012 | INFO     | errors: (none)
[2026-01-09 18:36:01] 2026-01-09 23:34:54,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:36:01] 2026-01-09 23:34:54,012 | INFO     | pilot state: finished 
[2026-01-09 18:36:01] 2026-01-09 23:34:54,012 | INFO     | transexitcode: 0
[2026-01-09 18:36:01] 2026-01-09 23:34:54,012 | INFO     | exeerrorcode: 0
[2026-01-09 18:36:01] 2026-01-09 23:34:54,012 | INFO     | exeerrordiag: 
[2026-01-09 18:36:01] 2026-01-09 23:34:54,013 | INFO     | exitcode: 0
[2026-01-09 18:36:01] 2026-01-09 23:34:54,013 | INFO     | exitmsg: OK
[2026-01-09 18:36:01] 2026-01-09 23:34:54,013 | INFO     | cpuconsumptiontime: 120207 s
[2026-01-09 18:36:01] 2026-01-09 23:34:54,013 | INFO     | nevents: 400
[2026-01-09 18:36:01] 2026-01-09 23:34:54,013 | INFO     | neventsw: 0
[2026-01-09 18:36:01] 2026-01-09 23:34:54,013 | INFO     | pid: 28908
[2026-01-09 18:36:01] 2026-01-09 23:34:54,014 | INFO     | pgrp: 28908
[2026-01-09 18:36:01] 2026-01-09 23:34:54,014 | INFO     | corecount: 8
[2026-01-09 18:36:01] 2026-01-09 23:34:54,014 | INFO     | event service: False
[2026-01-09 18:36:01] 2026-01-09 23:34:54,014 | INFO     | sizes: {0: 2283800, 1: 2283999, 4: 2284261, 12: 2284289, 15720: 2315387, 15721: 2315386, 15724: 2324568, 15726: 2324624, 15730: 2324818}
[2026-01-09 18:36:01] 2026-01-09 23:34:54,014 | INFO     | --------------------------------------------------
[2026-01-09 18:36:01] 2026-01-09 23:34:54,014 | INFO     | 
[2026-01-09 18:36:01] 2026-01-09 23:34:54,015 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 18:36:01] 2026-01-09 23:34:54,031 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,031 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,031 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,031 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,032 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | job 6963193730 has completed (purged errors)
[2026-01-09 18:36:01] 2026-01-09 23:34:54,033 | INFO     | overall cleanup function is called
[2026-01-09 18:36:01] 2026-01-09 23:34:55,040 | INFO     | --- collectZombieJob: --- 10, [28908]
[2026-01-09 18:36:01] 2026-01-09 23:34:55,041 | INFO     | zombie collector waiting for pid 28908
[2026-01-09 18:36:01] 2026-01-09 23:34:55,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:36:01] 2026-01-09 23:34:55,041 | INFO     | collected zombie processes
[2026-01-09 18:36:01] 2026-01-09 23:34:55,041 | INFO     | will attempt to kill all subprocesses of pid=28908
[2026-01-09 18:36:01] 2026-01-09 23:34:55,203 | INFO     | process IDs to be killed: [28908] (in reverse order)
[2026-01-09 18:36:01] 2026-01-09 23:34:55,261 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:36:01] 2026-01-09 23:34:55,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:36:01] 2026-01-09 23:34:55,266 | INFO     | did not find any defunct processes belonging to 28908
[2026-01-09 18:36:01] 2026-01-09 23:34:55,271 | INFO     | did not find any defunct processes belonging to 28908
[2026-01-09 18:36:01] 2026-01-09 23:34:55,271 | INFO     | ready for new job
[2026-01-09 18:36:01] 2026-01-09 23:34:55,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:36:01] 2026-01-09 23:34:55,274 | INFO     | ***************************************
[2026-01-09 18:36:01] 2026-01-09 23:34:55,274 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:36:01] 2026-01-09 23:34:55,274 | INFO     | ***************************************
[2026-01-09 18:36:01] 2026-01-09 23:34:55,274 | INFO     | 
[2026-01-09 18:36:01] 2026-01-09 23:34:55,276 | INFO     | architecture information:
[2026-01-09 18:36:01] 2026-01-09 23:34:55,276 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:36:01] 2026-01-09 23:34:55,291 | INFO     | cat /etc/os-release:
[2026-01-09 18:36:01] NAME="CentOS Linux"
[2026-01-09 18:36:01] VERSION="7 (Core)"
[2026-01-09 18:36:01] ID="centos"
[2026-01-09 18:36:01] ID_LIKE="rhel fedora"
[2026-01-09 18:36:01] VERSION_ID="7"
[2026-01-09 18:36:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:36:01] ANSI_COLOR="0;31"
[2026-01-09 18:36:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:36:01] HOME_URL="https://www.centos.org/"
[2026-01-09 18:36:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:36:01] 
[2026-01-09 18:36:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:36:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:36:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:36:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:36:01] 
[2026-01-09 18:36:01] 2026-01-09 23:34:55,292 | INFO     | ***************************************
[2026-01-09 18:36:01] 2026-01-09 23:34:55,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 18:36:01] 2026-01-09 23:34:55,820 | INFO     | sufficient remaining disk space (27403485184 B)
[2026-01-09 18:36:01] 2026-01-09 23:34:55,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:36:01] 2026-01-09 23:34:55,821 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:36:01] 2026-01-09 23:34:55,821 | INFO     | update_server=False
[2026-01-09 18:36:01] 2026-01-09 23:34:55,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:36:01] 2026-01-09 23:34:55,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:36:01] 2026-01-09 23:34:55,852 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:36:01] 2026-01-09 23:34:55,853 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:36:01] 2026-01-09 23:34:55,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:36:01] 2026-01-09 23:34:55,853 | INFO     | will abort loop
[2026-01-09 18:36:01] 2026-01-09 23:34:56,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:36:01] 2026-01-09 23:34:56,268 | INFO     | all data control threads have been joined
[2026-01-09 18:36:01] 2026-01-09 23:34:56,403 | INFO     | all payload control threads have been joined
[2026-01-09 18:36:01] 2026-01-09 23:34:56,826 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:56,859 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:56,978 | INFO     | [job] validate thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:57,136 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:57,273 | INFO     | [data] control thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:57,344 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:57,396 | INFO     | all job control threads have been joined
[2026-01-09 18:36:01] 2026-01-09 23:34:57,407 | INFO     | [payload] control thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:57,417 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:57,518 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:57,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:58,040 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:58,062 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:58,297 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:58,402 | INFO     | [job] control thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:58,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:36:01] 2026-01-09 23:34:59,792 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:34:59,827 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:36:01] 2026-01-09 23:35:25,767 | INFO     | PID=22494 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 18:36:01] 2026-01-09 23:35:25,767 | INFO     | .. there are 3 such processes running
[2026-01-09 18:36:01] 2026-01-09 23:35:25,767 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:36:01] 2026-01-09 23:35:25,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:36:01] 2026-01-09 23:35:25,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:36:01] 2026-01-09 23:35:54,281 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:36:01] 2026-01-09 23:35:55,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259494029120)>', '<ExcThread(monitor, started 140258909865728)>']
[2026-01-09 18:36:01] 2026-01-09 23:35:56,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:36:01] 2026-01-09 23:35:56,923 | INFO     | [monitor] control thread has ended
[2026-01-09 18:36:01] 2026-01-09 23:36:00,969 | INFO     | all workflow threads have been joined
[2026-01-09 18:36:01] 2026-01-09 23:36:00,969 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:36:01] 2026-01-09 23:36:00,969 | INFO     | traces error code: 0
[2026-01-09 18:36:01] 2026-01-09 23:36:00,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:36:01] 2026-01-09 23:36:01,104 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:36:01] 2026-01-09 23:36:01,107 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:36:01] 2026-01-09 23:36:01,110 [wrapper] pilotpid: 22494
[2026-01-09 18:36:01] 2026-01-09 23:36:01,112 [wrapper] Pilot exit status: 0
[2026-01-09 18:36:01] 2026-01-09 23:36:01,121 [wrapper] pandaids: 6963193730
[2026-01-09 18:36:01] 2026-01-09 23:36:01,162 [wrapper] cleanup supervisor_pilot  3226 22495
[2026-01-09 18:36:01] 2026-01-09 23:36:01,165 [wrapper] Test setup, not cleaning
[2026-01-09 18:36:01] 2026-01-09 23:36:01,171 [wrapper] apfmon messages muted
[2026-01-09 18:36:01] 2026-01-09 23:36:01,174 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:36:01] 2026-01-09 23:36:01,176 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:36:01]  *** Error codes and diagnostics ***
[2026-01-09 18:36:01]     "exeErrorCode": 0,
[2026-01-09 18:36:01]     "exeErrorDiag": "",
[2026-01-09 18:36:01]     "pilotErrorCode": 0,
[2026-01-09 18:36:01]     "pilotErrorDiag": "",
[2026-01-09 18:36:01]  *** Listing of results directory ***
[2026-01-09 18:36:01] total 443508
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 18:36:01] -rwx------ 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas       100 Jan  9 14:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:36:01] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 14:12 run_atlas
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas       105 Jan  9 14:12 job.xml
[2026-01-09 18:36:01] -rw-r--r-- 2 boincer umatlas 226244362 Jan  9 14:12 EVNT.47898824._001507.pool.root.1
[2026-01-09 18:36:01] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:12 start_atlas.sh
[2026-01-09 18:36:01] drwxrwx--x 2 boincer umatlas      4096 Jan  9 14:12 shared
[2026-01-09 18:36:01] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 14:12 input.tar.gz
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas         0 Jan  9 14:12 boinc_lockfile
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 14:12 pandaJob.out
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas        57 Jan  9 14:12 setup.sh.local
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas    989372 Jan  9 14:12 agis_schedconf.cvmfs.json
[2026-01-09 18:36:01] drwx------ 5 boincer umatlas      4096 Jan  9 14:12 pilot3
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 18:31 init_data.xml
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas 218666904 Jan  9 18:34 HITS.47898826._039203.pool.root.1
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas       532 Jan  9 18:34 boinc_task_state.xml
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas      1053 Jan  9 18:34 memory_monitor_summary.json
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas   1516240 Jan  9 18:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas    473602 Jan  9 18:34 log.47898826._039203.job.log.tgz.1
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas      7855 Jan  9 18:34 heartbeat.json
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas        95 Jan  9 18:35 pilot_heartbeat.json
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas      5007 Jan  9 18:36 pilotlog.txt
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 18:36 boinc_mmap_file
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas        29 Jan  9 18:36 wrapper_checkpoint.txt
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas   2187279 Jan  9 18:36 log.47898826._039203.job.log.1
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas       357 Jan  9 18:36 output.list
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas       620 Jan  9 18:36 runtime_log
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas   2682880 Jan  9 18:36 result.tar.gz
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 18:36 runtime_log.err
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas       664 Jan  9 18:36 gpbMDm4CJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPEmKDm2YrR8n.diag
[2026-01-09 18:36:01] -rw-r--r-- 1 boincer umatlas     21088 Jan  9 18:36 stderr.txt
[2026-01-09 18:36:01] HITS file was successfully produced:
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas 218666904 Jan  9 18:34 shared/HITS.pool.root.1
[2026-01-09 18:36:01]  *** Contents of shared directory: ***
[2026-01-09 18:36:01] total 437708
[2026-01-09 18:36:01] -rw-r--r-- 2 boincer umatlas 226244362 Jan  9 14:12 ATLAS.root_0
[2026-01-09 18:36:01] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:12 start_atlas.sh
[2026-01-09 18:36:01] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 14:12 input.tar.gz
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas 218666904 Jan  9 18:34 HITS.pool.root.1
[2026-01-09 18:36:01] -rw------- 1 boincer umatlas   2682880 Jan  9 18:36 result.tar.gz
18:36:03 (18803): run_atlas exited; CPU time 120422.370969
18:36:03 (18803): called boinc_finish(0)

</stderr_txt>
]]>

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