Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:51:06 (124704): wrapper (7.7.26015): starting
09:51:06 (124704): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 09:51:06] Arguments: --nthreads 4
[2026-01-11 09:51:06] Threads: 4
[2026-01-11 09:51:06] Checking for CVMFS
[2026-01-11 09:51:06] No cvmfs_config command found, will try listing directly
[2026-01-11 09:51:06] CVMFS is ok
[2026-01-11 09:51:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 09:51:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 09:51:06] Further information can be found at the LHC@home message board.
[2026-01-11 09:51:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 09:51:06] Checking for apptainer binary...
[2026-01-11 09:51:06] which: no apptainer in ((null))
[2026-01-11 09:51:06] apptainer is not installed, using version from CVMFS
[2026-01-11 09:51:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 09:51:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-11 09:51:07] apptainer works
[2026-01-11 09:51:07] Set ATHENA_PROC_NUMBER=4
[2026-01-11 09:51:07] Set ATHENA_CORE_NUMBER=4
[2026-01-11 09:51:07] Starting ATLAS job with PandaID=6963193593
[2026-01-11 09:51:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 13:34:55]  *** The last 200 lines of the pilot log: ***
[2026-01-11 13:34:55] 2026-01-11 12:32:40,718 | INFO     | .. there are 8 such processes running
[2026-01-11 13:34:55] 2026-01-11 12:32:41,719 | INFO     | time since job start (13280s) is within the limit (349056.0s)
[2026-01-11 13:34:55] 2026-01-11 12:32:42,172 | INFO     | monitor loop #905: job 0:6963193593 is in state 'finished'
[2026-01-11 13:34:55] 2026-01-11 12:32:42,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 13:34:55] 2026-01-11 12:32:43,724 | INFO     | time since job start (13282s) is within the limit (349056.0s)
[2026-01-11 13:34:55] 2026-01-11 12:32:44,679 | INFO     | monitor loop #906: job 0:6963193593 is in state 'finished'
[2026-01-11 13:34:55] 2026-01-11 12:32:44,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 13:34:55] 2026-01-11 12:32:45,729 | INFO     | time since job start (13284s) is within the limit (349056.0s)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,145 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 13:34:55] 2026-01-11 12:32:46,167 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2647.1176093749987
[2026-01-11 13:34:55] 2026-01-11 12:32:46,192 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6963193593/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,193 | INFO     | extracted standard info from prmon json
[2026-01-11 13:34:55] 2026-01-11 12:32:46,193 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 13:34:55] 2026-01-11 12:32:46,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 13:34:55] 2026-01-11 12:32:46,194 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 13:34:55] 2026-01-11 12:32:46,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 13:34:55] 2026-01-11 12:32:46,198 | INFO     | fitting pss+swap vs Time
[2026-01-11 13:34:55] 2026-01-11 12:32:46,198 | INFO     | sum of square deviations: 3168461268.0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,200 | INFO     | sum of deviations: 25559532468.999992
[2026-01-11 13:34:55] 2026-01-11 12:32:46,200 | INFO     | mean x: 1768128103.0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,200 | INFO     | mean y: 2316697.119815668
[2026-01-11 13:34:55] 2026-01-11 12:32:46,200 | INFO     | intersect: -14260924616.38576
[2026-01-11 13:34:55] 2026-01-11 12:32:46,201 | INFO     | chi2: 1.3112796404535685
[2026-01-11 13:34:55] 2026-01-11 12:32:46,201 | INFO     | sum of square deviations: 2954447953.0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,203 | INFO     | sum of deviations: 24839663874.5
[2026-01-11 13:34:55] 2026-01-11 12:32:46,203 | INFO     | mean x: 1768127950.5
[2026-01-11 13:34:55] 2026-01-11 12:32:46,203 | INFO     | mean y: 2316184.1556603773
[2026-01-11 13:34:55] 2026-01-11 12:32:46,203 | INFO     | intersect: -14863304966.127832
[2026-01-11 13:34:55] 2026-01-11 12:32:46,203 | INFO     | chi2: 1.3119579181556098
[2026-01-11 13:34:55] 2026-01-11 12:32:46,203 | INFO     | current chi2=1.3119579181556098 (change=-0.051726396194689966 %)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,204 | INFO     | right removable region: 211
[2026-01-11 13:34:55] 2026-01-11 12:32:46,204 | INFO     | sum of square deviations: 2954447953.0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,205 | INFO     | sum of deviations: -677229899.500001
[2026-01-11 13:34:55] 2026-01-11 12:32:46,206 | INFO     | mean x: 1768128255.5
[2026-01-11 13:34:55] 2026-01-11 12:32:46,206 | INFO     | mean y: 2335148.6084905663
[2026-01-11 13:34:55] 2026-01-11 12:32:46,206 | INFO     | intersect: 407632293.7348705
[2026-01-11 13:34:55] 2026-01-11 12:32:46,206 | INFO     | chi2: 0.010150109804340144
[2026-01-11 13:34:55] 2026-01-11 12:32:46,206 | INFO     | current chi2=0.010150109804340144 (change=99.22593858005534 %)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,207 | INFO     | sum of square deviations: 2750295288.0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,208 | INFO     | sum of deviations: -129835083.99999994
[2026-01-11 13:34:55] 2026-01-11 12:32:46,208 | INFO     | mean x: 1768128408.0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,208 | INFO     | mean y: 2334737.6231884058
[2026-01-11 13:34:55] 2026-01-11 12:32:46,208 | INFO     | intersect: 85803993.22534038
[2026-01-11 13:34:55] 2026-01-11 12:32:46,209 | INFO     | chi2: 0.009880420735511092
[2026-01-11 13:34:55] 2026-01-11 12:32:46,209 | INFO     | current chi2=0.009880420735511092 (change=2.6570064169525924 %)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,209 | INFO     | left removable region: 20
[2026-01-11 13:34:55] 2026-01-11 12:32:46,209 | INFO     | sum of square deviations: 2160561440.0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,210 | INFO     | sum of deviations: 2754062404.0000005
[2026-01-11 13:34:55] 2026-01-11 12:32:46,211 | INFO     | mean x: 1768128530.0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,211 | INFO     | mean y: 2332034.848167539
[2026-01-11 13:34:55] 2026-01-11 12:32:46,211 | INFO     | intersect: -2251497094.821381
[2026-01-11 13:34:55] 2026-01-11 12:32:46,211 | INFO     | chi2: 0.0043746574106949924
[2026-01-11 13:34:55] 2026-01-11 12:32:46,211 | INFO     | current memory leak: 1.27 B/s (using 191 data points, chi2=0.00)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,212 | INFO     | could have reported an average CPU frequency of 2687 MHz (11 samples)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,212 | INFO     | ..............................
[2026-01-11 13:34:55] 2026-01-11 12:32:46,212 | INFO     | . Timing measurements:
[2026-01-11 13:34:55] 2026-01-11 12:32:46,212 | INFO     | . get job = 0 s
[2026-01-11 13:34:55] 2026-01-11 12:32:46,212 | INFO     | . initial setup = 1 s
[2026-01-11 13:34:55] 2026-01-11 12:32:46,212 | INFO     | . payload setup = 8 s
[2026-01-11 13:34:55] 2026-01-11 12:32:46,212 | INFO     | . stage-in = 0 s
[2026-01-11 13:34:55] 2026-01-11 12:32:46,212 | INFO     | . payload execution = 13244 s
[2026-01-11 13:34:55] 2026-01-11 12:32:46,213 | INFO     | . stage-out = 1 s
[2026-01-11 13:34:55] 2026-01-11 12:32:46,213 | INFO     | . log creation = 0 s
[2026-01-11 13:34:55] 2026-01-11 12:32:46,213 | INFO     | ..............................
[2026-01-11 13:34:55] 2026-01-11 12:32:46,425 | INFO     | 
[2026-01-11 13:34:55] 2026-01-11 12:32:46,425 | INFO     | job summary report
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | --------------------------------------------------
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | PanDA job id: 6963193593
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | task id: 47898826
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | errors: (none)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | pilot state: finished 
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | transexitcode: 0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | exeerrorcode: 0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | exeerrordiag: 
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | exitcode: 0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | exitmsg: OK
[2026-01-11 13:34:55] 2026-01-11 12:32:46,426 | INFO     | cpuconsumptiontime: 51320 s
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | nevents: 400
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | neventsw: 0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | pid: 147387
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | pgrp: 147387
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | corecount: 4
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | event service: False
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | sizes: {0: 2283143, 1: 2284011, 7: 2284273, 12: 2284301, 13256: 2315132, 13257: 2315131, 13258: 2324337, 13261: 2324393, 13268: 2324587}
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | --------------------------------------------------
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | 
[2026-01-11 13:34:55] 2026-01-11 12:32:46,427 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-11 13:34:55] 2026-01-11 12:32:46,456 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,457 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,457 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,457 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,459 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,459 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 13:34:55] 2026-01-11 12:32:46,459 | INFO     | job 6963193593 has completed (purged errors)
[2026-01-11 13:34:55] 2026-01-11 12:32:46,459 | INFO     | overall cleanup function is called
[2026-01-11 13:34:55] 2026-01-11 12:32:47,468 | INFO     | --- collectZombieJob: --- 10, [147387]
[2026-01-11 13:34:55] 2026-01-11 12:32:47,469 | INFO     | zombie collector waiting for pid 147387
[2026-01-11 13:34:55] 2026-01-11 12:32:47,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 13:34:55] 2026-01-11 12:32:47,469 | INFO     | collected zombie processes
[2026-01-11 13:34:55] 2026-01-11 12:32:47,469 | INFO     | will attempt to kill all subprocesses of pid=147387
[2026-01-11 13:34:55] 2026-01-11 12:32:48,306 | INFO     | process IDs to be killed: [147387] (in reverse order)
[2026-01-11 13:34:55] 2026-01-11 12:32:48,563 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 13:34:55] 2026-01-11 12:32:48,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 13:34:55] 2026-01-11 12:32:48,595 | INFO     | did not find any defunct processes belonging to 147387
[2026-01-11 13:34:55] 2026-01-11 12:32:48,625 | INFO     | did not find any defunct processes belonging to 147387
[2026-01-11 13:34:55] 2026-01-11 12:32:48,625 | INFO     | ready for new job
[2026-01-11 13:34:55] 2026-01-11 12:32:48,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 13:34:55] 2026-01-11 12:32:48,628 | INFO     | ***************************************
[2026-01-11 13:34:55] 2026-01-11 12:32:48,628 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 13:34:55] 2026-01-11 12:32:48,628 | INFO     | ***************************************
[2026-01-11 13:34:55] 2026-01-11 12:32:48,628 | INFO     | 
[2026-01-11 13:34:55] 2026-01-11 12:32:48,637 | INFO     | architecture information:
[2026-01-11 13:34:55] 2026-01-11 12:32:48,638 | INFO     | executing command: cat /etc/os-release
[2026-01-11 13:34:55] 2026-01-11 12:32:48,660 | INFO     | cat /etc/os-release:
[2026-01-11 13:34:55] NAME="CentOS Linux"
[2026-01-11 13:34:55] VERSION="7 (Core)"
[2026-01-11 13:34:55] ID="centos"
[2026-01-11 13:34:55] ID_LIKE="rhel fedora"
[2026-01-11 13:34:55] VERSION_ID="7"
[2026-01-11 13:34:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 13:34:55] ANSI_COLOR="0;31"
[2026-01-11 13:34:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 13:34:55] HOME_URL="https://www.centos.org/"
[2026-01-11 13:34:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 13:34:55] 
[2026-01-11 13:34:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 13:34:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 13:34:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 13:34:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 13:34:55] 
[2026-01-11 13:34:55] 2026-01-11 12:32:48,661 | INFO     | ***************************************
[2026-01-11 13:34:55] 2026-01-11 12:32:49,164 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-11 13:34:55] 2026-01-11 12:32:49,186 | INFO     | sufficient remaining disk space (3351059103744 B)
[2026-01-11 13:34:55] 2026-01-11 12:32:49,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 13:34:55] 2026-01-11 12:32:49,187 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 13:34:55] 2026-01-11 12:32:49,187 | INFO     | update_server=False
[2026-01-11 13:34:55] 2026-01-11 12:32:49,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 13:34:55] 2026-01-11 12:32:49,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:34:55] 2026-01-11 12:32:49,188 | INFO     | aborting loop
[2026-01-11 13:34:55] 2026-01-11 12:32:49,208 | INFO     | all job control threads have been joined
[2026-01-11 13:34:55] 2026-01-11 12:32:49,957 | INFO     | all data control threads have been joined
[2026-01-11 13:34:55] 2026-01-11 12:32:50,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 13:34:55] 2026-01-11 12:32:50,192 | INFO     | [job] retrieve thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:50,193 | INFO     | [job] job monitor thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:50,211 | INFO     | [job] control thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:50,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 13:34:55] 2026-01-11 12:32:50,473 | INFO     | [job] validate thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:50,547 | INFO     | [data] copytool_in thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:50,604 | INFO     | all payload control threads have been joined
[2026-01-11 13:34:55] 2026-01-11 12:32:50,757 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:50,783 | INFO     | [payload] failed_post thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:50,962 | INFO     | [data] control thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:51,180 | INFO     | [payload] validate_post thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:51,318 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:51,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:34:55] 2026-01-11 12:32:51,609 | INFO     | [payload] control thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:51,643 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:52,014 | INFO     | [data] copytool_out thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:52,328 | INFO     | [job] queue monitor thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:54,240 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:32:59,313 | INFO     | job.realtimelogging is not enabled
[2026-01-11 13:34:55] 2026-01-11 12:33:00,318 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 13:34:55] 2026-01-11 12:33:19,796 | INFO     | PID=132468 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 13:34:55] 2026-01-11 12:33:19,796 | INFO     | .. there are 8 such processes running
[2026-01-11 13:34:55] 2026-01-11 12:33:19,796 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 13:34:55] 2026-01-11 12:33:19,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 13:34:55] 2026-01-11 12:33:19,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 13:34:55] 2026-01-11 12:33:42,121 | INFO     | [monitor] cgroup control has ended
[2026-01-11 13:34:55] 2026-01-11 12:33:43,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22991943558976)>', '<ExcThread(monitor, started 22991702288128)>']
[2026-01-11 13:34:55] 2026-01-11 12:33:43,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 13:34:55] 2026-01-11 12:33:43,908 | INFO     | [monitor] control thread has ended
[2026-01-11 13:34:55] 2026-01-11 12:33:48,738 | INFO     | all workflow threads have been joined
[2026-01-11 13:34:55] 2026-01-11 12:33:48,738 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 13:34:55] 2026-01-11 12:33:48,738 | INFO     | traces error code: 0
[2026-01-11 13:34:55] 2026-01-11 12:33:48,739 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 13:34:55] 2026-01-11 12:33:48,878 [wrapper] ==== pilot stdout END ====
[2026-01-11 13:34:55] 2026-01-11 12:33:48,882 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 13:34:55] 2026-01-11 12:33:48,886 [wrapper] pilotpid: 132468
[2026-01-11 13:34:55] 2026-01-11 12:33:48,890 [wrapper] Pilot exit status: 0
[2026-01-11 13:34:55] 2026-01-11 12:33:48,904 [wrapper] pandaids: 6963193593
[2026-01-11 13:34:55] 2026-01-11 12:33:49,084 [wrapper] cleanup supervisor_pilot  543947 132469
[2026-01-11 13:34:55] 2026-01-11 12:33:49,087 [wrapper] Test setup, not cleaning
[2026-01-11 13:34:55] 2026-01-11 12:33:49,091 [wrapper] apfmon messages muted
[2026-01-11 13:34:55] 2026-01-11 12:33:49,095 [wrapper] ==== wrapper stdout END ====
[2026-01-11 13:34:55] 2026-01-11 12:33:49,099 [wrapper] ==== wrapper stderr END ====
[2026-01-11 13:34:55]  *** Error codes and diagnostics ***
[2026-01-11 13:34:55]     "exeErrorCode": 0,
[2026-01-11 13:34:55]     "exeErrorDiag": "",
[2026-01-11 13:34:55]     "pilotErrorCode": 0,
[2026-01-11 13:34:55]     "pilotErrorDiag": "",
[2026-01-11 13:34:55]  *** Listing of results directory ***
[2026-01-11 13:34:55] total 442184
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-11 13:34:55] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc       100 Jan 11 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 13:34:55] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 09:51 run_atlas
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc       105 Jan 11 09:51 job.xml
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc      6692 Jan 11 09:51 init_data.xml
[2026-01-11 13:34:55] -rw-r--r-- 2 boinc boinc 223888093 Jan 11 09:51 EVNT.47898824._001501.pool.root.1
[2026-01-11 13:34:55] -rw-r--r-- 2 boinc boinc     15847 Jan 11 09:51 start_atlas.sh
[2026-01-11 13:34:55] drwxrwx--x 2 boinc boinc      4096 Jan 11 09:51 shared
[2026-01-11 13:34:55] -rw-r--r-- 2 boinc boinc    592395 Jan 11 09:51 input.tar.gz
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc         0 Jan 11 09:51 boinc_lockfile
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc      2520 Jan 11 09:51 pandaJob.out
[2026-01-11 13:34:55] -rw------- 1 boinc boinc    989548 Jan 11 09:51 agis_schedconf.cvmfs.json
[2026-01-11 13:34:55] drwx------ 5 boinc boinc      4096 Jan 11 09:51 pilot3
[2026-01-11 13:34:55] -rw------- 1 boinc boinc 220505579 Jan 11 13:31 HITS.47898826._039066.pool.root.1
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc       528 Jan 11 13:32 boinc_task_state.xml
[2026-01-11 13:34:55] -rw------- 1 boinc boinc        95 Jan 11 13:32 pilot_heartbeat.json
[2026-01-11 13:34:55] -rw------- 1 boinc boinc      1031 Jan 11 13:32 memory_monitor_summary.json
[2026-01-11 13:34:55] -rw------- 1 boinc boinc   1516240 Jan 11 13:32 agis_ddmendpoints.agis.ALL.json
[2026-01-11 13:34:55] -rw------- 1 boinc boinc    398276 Jan 11 13:32 log.47898826._039066.job.log.tgz.1
[2026-01-11 13:34:55] -rw------- 1 boinc boinc      7787 Jan 11 13:32 heartbeat.json
[2026-01-11 13:34:55] -rw------- 1 boinc boinc      4906 Jan 11 13:33 pilotlog.txt
[2026-01-11 13:34:55] -rw------- 1 boinc boinc   1842018 Jan 11 13:33 log.47898826._039066.job.log.1
[2026-01-11 13:34:55] -rw------- 1 boinc boinc       357 Jan 11 13:33 output.list
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc       620 Jan 11 13:33 runtime_log
[2026-01-11 13:34:55] -rw------- 1 boinc boinc   2263040 Jan 11 13:33 result.tar.gz
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc      9223 Jan 11 13:33 runtime_log.err
[2026-01-11 13:34:55] -rw------- 1 boinc boinc       666 Jan 11 13:33 qbMMDm4CJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk0gKDmPeeNEm.diag
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc        26 Jan 11 13:34 wrapper_checkpoint.txt
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc      8192 Jan 11 13:34 boinc_mmap_file
[2026-01-11 13:34:55] -rw-r--r-- 1 boinc boinc     21093 Jan 11 13:34 stderr.txt
[2026-01-11 13:34:55] HITS file was successfully produced:
[2026-01-11 13:34:55] -rw------- 1 boinc boinc 220505579 Jan 11 13:31 shared/HITS.pool.root.1
[2026-01-11 13:34:55]  *** Contents of shared directory: ***
[2026-01-11 13:34:55] total 436800
[2026-01-11 13:34:55] -rw-r--r-- 2 boinc boinc 223888093 Jan 11 09:51 ATLAS.root_0
[2026-01-11 13:34:55] -rw-r--r-- 2 boinc boinc     15847 Jan 11 09:51 start_atlas.sh
[2026-01-11 13:34:55] -rw-r--r-- 2 boinc boinc    592395 Jan 11 09:51 input.tar.gz
[2026-01-11 13:34:55] -rw------- 1 boinc boinc 220505579 Jan 11 13:31 HITS.pool.root.1
[2026-01-11 13:34:55] -rw------- 1 boinc boinc   2263040 Jan 11 13:33 result.tar.gz
13:34:56 (124704): run_atlas exited; CPU time 52253.600272
13:34:56 (124704): called boinc_finish(0)

</stderr_txt>
]]>

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