Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:43:43 (13865): wrapper (7.7.26015): starting
00:43:43 (13865): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 00:43:43] Arguments: --nthreads 8
[2026-01-10 00:43:43] Threads: 8
[2026-01-10 00:43:43] Checking for CVMFS
[2026-01-10 00:43:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:43:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:43:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:43:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:43:47] 2.11.2.0 16377 36068 99408 154961 2 63 22065861 25165825 899 130560 0 15742749 99.828 9434485 2203 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 00:43:47] CVMFS is ok
[2026-01-10 00:43:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:43:47] Checking for apptainer binary...
[2026-01-10 00:43:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:43:47] Running /usr/bin/apptainer --version
[2026-01-10 00:43:47] apptainer version 1.3.2-1.el7
[2026-01-10 00:43:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:44:02] cg-vwn414.simple-grid.lan
[2026-01-10 00:44:02] apptainer works
[2026-01-10 00:44:02] Set ATHENA_PROC_NUMBER=8
[2026-01-10 00:44:02] Set ATHENA_CORE_NUMBER=8
[2026-01-10 00:44:02] Starting ATLAS job with PandaID=6963192163
[2026-01-10 00:44:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:54:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:54:48] 2026-01-10 05:53:36,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,472 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:54:48] 2026-01-10 05:53:37,473 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 06:54:48] 2026-01-10 05:53:37,475 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963192163/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,476 | INFO     | extracted standard info from prmon json
[2026-01-10 06:54:48] 2026-01-10 05:53:37,476 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:54:48] 2026-01-10 05:53:37,476 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:54:48] 2026-01-10 05:53:37,476 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 06:54:48] 2026-01-10 05:53:37,476 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 06:54:48] 2026-01-10 05:53:37,484 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:54:48] 2026-01-10 05:53:37,485 | INFO     | sum of square deviations: 13294714387.5
[2026-01-10 06:54:48] 2026-01-10 05:53:37,489 | INFO     | sum of deviations: 205123124369.99994
[2026-01-10 06:54:48] 2026-01-10 05:53:37,489 | INFO     | mean x: 1768013644.5
[2026-01-10 06:54:48] 2026-01-10 05:53:37,489 | INFO     | mean y: 2441523.502857143
[2026-01-10 06:54:48] 2026-01-10 05:53:37,489 | INFO     | intersect: -27276104830.95002
[2026-01-10 06:54:48] 2026-01-10 05:53:37,490 | INFO     | chi2: 7.461116490109159
[2026-01-10 06:54:48] 2026-01-10 05:53:37,491 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,494 | INFO     | sum of deviations: 225028339369.99997
[2026-01-10 06:54:48] 2026-01-10 05:53:37,495 | INFO     | mean x: 1768013492.0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,495 | INFO     | mean y: 2446854.834782609
[2026-01-10 06:54:48] 2026-01-10 05:53:37,495 | INFO     | intersect: -31243287035.747467
[2026-01-10 06:54:48] 2026-01-10 05:53:37,496 | INFO     | chi2: 6.729853954550959
[2026-01-10 06:54:48] 2026-01-10 05:53:37,496 | INFO     | current chi2=6.729853954550959 (change=9.800980007852711 %)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,496 | INFO     | right removable region: 344
[2026-01-10 06:54:48] 2026-01-10 05:53:37,497 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,506 | INFO     | sum of deviations: 84627161354.0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,506 | INFO     | mean x: 1768013797.0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,506 | INFO     | mean y: 2474221.4637681157
[2026-01-10 06:54:48] 2026-01-10 05:53:37,506 | INFO     | intersect: -11748215612.282642
[2026-01-10 06:54:48] 2026-01-10 05:53:37,507 | INFO     | chi2: 2.8236808311807695
[2026-01-10 06:54:48] 2026-01-10 05:53:37,507 | INFO     | current chi2=2.8236808311807695 (change=62.154714580264404 %)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,508 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,512 | INFO     | sum of deviations: 7722308358.999992
[2026-01-10 06:54:48] 2026-01-10 05:53:37,512 | INFO     | mean x: 1768013949.5
[2026-01-10 06:54:48] 2026-01-10 05:53:37,512 | INFO     | mean y: 2495659.564705882
[2026-01-10 06:54:48] 2026-01-10 05:53:37,512 | INFO     | intersect: -1117770993.2743938
[2026-01-10 06:54:48] 2026-01-10 05:53:37,513 | INFO     | chi2: 0.8479444018753421
[2026-01-10 06:54:48] 2026-01-10 05:53:37,513 | INFO     | current chi2=0.8479444018753421 (change=69.97024619383913 %)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,513 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,517 | INFO     | sum of deviations: 2029374901.0000038
[2026-01-10 06:54:48] 2026-01-10 05:53:37,517 | INFO     | mean x: 1768014102.0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,518 | INFO     | mean y: 2497276.72238806
[2026-01-10 06:54:48] 2026-01-10 05:53:37,518 | INFO     | intersect: -305281758.7239085
[2026-01-10 06:54:48] 2026-01-10 05:53:37,525 | INFO     | chi2: 0.8142179963087374
[2026-01-10 06:54:48] 2026-01-10 05:53:37,526 | INFO     | current chi2=0.8142179963087374 (change=3.9774312433709493 %)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,526 | INFO     | left removable region: 30
[2026-01-10 06:54:48] 2026-01-10 05:53:37,526 | INFO     | sum of square deviations: 9599817202.5
[2026-01-10 06:54:48] 2026-01-10 05:53:37,530 | INFO     | sum of deviations: 22091804621.499996
[2026-01-10 06:54:48] 2026-01-10 05:53:37,530 | INFO     | mean x: 1768014376.5
[2026-01-10 06:54:48] 2026-01-10 05:53:37,530 | INFO     | mean y: 2504282.939490446
[2026-01-10 06:54:48] 2026-01-10 05:53:37,530 | INFO     | intersect: -4066180291.957355
[2026-01-10 06:54:48] 2026-01-10 05:53:37,531 | INFO     | chi2: 0.0015335668738613592
[2026-01-10 06:54:48] 2026-01-10 05:53:37,531 | INFO     | current memory leak: 2.30 B/s (using 314 data points, chi2=0.00)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,532 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,532 | INFO     | ..............................
[2026-01-10 06:54:48] 2026-01-10 05:53:37,532 | INFO     | . Timing measurements:
[2026-01-10 06:54:48] 2026-01-10 05:53:37,532 | INFO     | . get job = 0 s
[2026-01-10 06:54:48] 2026-01-10 05:53:37,532 | INFO     | . initial setup = 12 s
[2026-01-10 06:54:48] 2026-01-10 05:53:37,532 | INFO     | . payload setup = 146 s
[2026-01-10 06:54:48] 2026-01-10 05:53:37,532 | INFO     | . stage-in = 0 s
[2026-01-10 06:54:48] 2026-01-10 05:53:37,532 | INFO     | . payload execution = 21477 s
[2026-01-10 06:54:48] 2026-01-10 05:53:37,533 | INFO     | . stage-out = 5 s
[2026-01-10 06:54:48] 2026-01-10 05:53:37,533 | INFO     | . log creation = 0 s
[2026-01-10 06:54:48] 2026-01-10 05:53:37,533 | INFO     | ..............................
[2026-01-10 06:54:48] 2026-01-10 05:53:37,674 | INFO     | 
[2026-01-10 06:54:48] 2026-01-10 05:53:37,674 | INFO     | job summary report
[2026-01-10 06:54:48] 2026-01-10 05:53:37,674 | INFO     | --------------------------------------------------
[2026-01-10 06:54:48] 2026-01-10 05:53:37,674 | INFO     | PanDA job id: 6963192163
[2026-01-10 06:54:48] 2026-01-10 05:53:37,675 | INFO     | task id: 47898826
[2026-01-10 06:54:48] 2026-01-10 05:53:37,675 | INFO     | errors: (none)
[2026-01-10 06:54:48] 2026-01-10 05:53:37,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:54:48] 2026-01-10 05:53:37,683 | INFO     | pilot state: finished 
[2026-01-10 06:54:48] 2026-01-10 05:53:37,683 | INFO     | transexitcode: 0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,683 | INFO     | exeerrorcode: 0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,683 | INFO     | exeerrordiag: 
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | exitcode: 0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | exitmsg: OK
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | cpuconsumptiontime: 81424 s
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | nevents: 400
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | neventsw: 0
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | pid: 24369
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | pgrp: 24369
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | corecount: 8
[2026-01-10 06:54:48] 2026-01-10 05:53:37,684 | INFO     | event service: False
[2026-01-10 06:54:48] 2026-01-10 05:53:37,685 | INFO     | sizes: {0: 2283143, 1: 2283999, 2: 2284027, 12: 2284027, 23: 2284055, 34: 2284083, 45: 2284239, 55: 2284267, 66: 2284295, 77: 2284323, 88: 2284379, 98: 2284687, 10
[2026-01-10 06:54:48] 2026-01-10 05:53:37,685 | INFO     | --------------------------------------------------
[2026-01-10 06:54:48] 2026-01-10 05:53:37,685 | INFO     | 
[2026-01-10 06:54:48] 2026-01-10 05:53:37,685 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 06:54:48] 2026-01-10 05:53:38,375 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,375 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,375 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,375 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,377 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:54:48] 2026-01-10 05:53:38,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,377 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:54:48] 2026-01-10 05:53:38,377 | INFO     | job 6963192163 has completed (purged errors)
[2026-01-10 06:54:48] 2026-01-10 05:53:38,377 | INFO     | overall cleanup function is called
[2026-01-10 06:54:48] 2026-01-10 05:53:39,386 | INFO     | --- collectZombieJob: --- 10, [24369]
[2026-01-10 06:54:48] 2026-01-10 05:53:39,386 | INFO     | zombie collector waiting for pid 24369
[2026-01-10 06:54:48] 2026-01-10 05:53:39,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:54:48] 2026-01-10 05:53:39,386 | INFO     | collected zombie processes
[2026-01-10 06:54:48] 2026-01-10 05:53:39,387 | INFO     | will attempt to kill all subprocesses of pid=24369
[2026-01-10 06:54:48] 2026-01-10 05:53:39,475 | INFO     | process IDs to be killed: [24369] (in reverse order)
[2026-01-10 06:54:48] 2026-01-10 05:53:40,101 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:54:48] 2026-01-10 05:53:40,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:54:48] 2026-01-10 05:53:40,103 | INFO     | did not find any defunct processes belonging to 24369
[2026-01-10 06:54:48] 2026-01-10 05:53:40,105 | INFO     | did not find any defunct processes belonging to 24369
[2026-01-10 06:54:48] 2026-01-10 05:53:40,105 | INFO     | ready for new job
[2026-01-10 06:54:48] 2026-01-10 05:53:40,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:54:48] 2026-01-10 05:53:40,108 | INFO     | ***************************************
[2026-01-10 06:54:48] 2026-01-10 05:53:40,108 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:54:48] 2026-01-10 05:53:40,108 | INFO     | ***************************************
[2026-01-10 06:54:48] 2026-01-10 05:53:40,108 | INFO     | 
[2026-01-10 06:54:48] 2026-01-10 05:53:40,109 | INFO     | pilot is running in a VM
[2026-01-10 06:54:48] 2026-01-10 05:53:40,109 | INFO     | architecture information:
[2026-01-10 06:54:48] 2026-01-10 05:53:40,117 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:54:48] 2026-01-10 05:53:40,290 | INFO     | cat /etc/os-release:
[2026-01-10 06:54:48] NAME="CentOS Linux"
[2026-01-10 06:54:48] VERSION="7 (Core)"
[2026-01-10 06:54:48] ID="centos"
[2026-01-10 06:54:48] ID_LIKE="rhel fedora"
[2026-01-10 06:54:48] VERSION_ID="7"
[2026-01-10 06:54:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:54:48] ANSI_COLOR="0;31"
[2026-01-10 06:54:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:54:48] HOME_URL="https://www.centos.org/"
[2026-01-10 06:54:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:54:48] 
[2026-01-10 06:54:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:54:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:54:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:54:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:54:48] 
[2026-01-10 06:54:48] 2026-01-10 05:53:40,291 | INFO     | ***************************************
[2026-01-10 06:54:48] 2026-01-10 05:53:40,794 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 06:54:48] 2026-01-10 05:53:41,046 | INFO     | sufficient remaining disk space (497315479552 B)
[2026-01-10 06:54:48] 2026-01-10 05:53:41,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:54:48] 2026-01-10 05:53:41,046 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:54:48] 2026-01-10 05:53:41,046 | INFO     | update_server=False
[2026-01-10 06:54:48] 2026-01-10 05:53:41,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:54:48] 2026-01-10 05:53:41,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:54:48] 2026-01-10 05:53:41,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:54:48] 2026-01-10 05:53:41,049 | INFO     | aborting loop
[2026-01-10 06:54:48] 2026-01-10 05:53:41,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:54:48] 2026-01-10 05:53:41,146 | INFO     | all payload control threads have been joined
[2026-01-10 06:54:48] 2026-01-10 05:53:41,159 | INFO     | all job control threads have been joined
[2026-01-10 06:54:48] 2026-01-10 05:53:41,373 | INFO     | all data control threads have been joined
[2026-01-10 06:54:48] 2026-01-10 05:53:42,052 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,055 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,151 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,152 | INFO     | [payload] control thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,165 | INFO     | [job] control thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,344 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,379 | INFO     | [data] control thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,522 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,647 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:42,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:54:48] 2026-01-10 05:53:42,826 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:43,054 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:43,234 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:43,249 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:43,421 | INFO     | [job] validate thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:43,696 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:53:45,062 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:54:48] 2026-01-10 05:54:09,839 | INFO     | PID=17818 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:54:48] 2026-01-10 05:54:09,839 | INFO     | .. there are 2 such processes running
[2026-01-10 06:54:48] 2026-01-10 05:54:09,840 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:54:48] 2026-01-10 05:54:09,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:54:48] 2026-01-10 05:54:09,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:54:48] 2026-01-10 05:54:37,457 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:54:48] 2026-01-10 05:54:38,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481060022080)>', '<ExcThread(monitor, started 140480746592000)>']
[2026-01-10 06:54:48] 2026-01-10 05:54:39,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:54:48] 2026-01-10 05:54:39,014 | INFO     | [monitor] control thread has ended
[2026-01-10 06:54:48] 2026-01-10 05:54:43,864 | INFO     | all workflow threads have been joined
[2026-01-10 06:54:48] 2026-01-10 05:54:43,864 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:54:48] 2026-01-10 05:54:43,865 | INFO     | traces error code: 0
[2026-01-10 06:54:48] 2026-01-10 05:54:43,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:54:48] 2026-01-10 05:54:44,326 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:54:48] 2026-01-10 05:54:44,427 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:54:48] 2026-01-10 05:54:44,545 [wrapper] pilotpid: 17818
[2026-01-10 06:54:48] 2026-01-10 05:54:44,673 [wrapper] Pilot exit status: 0
[2026-01-10 06:54:48] 2026-01-10 05:54:45,001 [wrapper] pandaids: 6963192163
[2026-01-10 06:54:48] 2026-01-10 05:54:45,420 [wrapper] cleanup supervisor_pilot 23330 17819
[2026-01-10 06:54:48] 2026-01-10 05:54:45,555 [wrapper] Test setup, not cleaning
[2026-01-10 06:54:48] 2026-01-10 05:54:45,655 [wrapper] apfmon messages muted
[2026-01-10 06:54:48] 2026-01-10 05:54:45,740 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:54:48] 2026-01-10 05:54:45,788 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:54:48]  *** Error codes and diagnostics ***
[2026-01-10 06:54:48]     "exeErrorCode": 0,
[2026-01-10 06:54:48]     "exeErrorDiag": "",
[2026-01-10 06:54:48]     "pilotErrorCode": 0,
[2026-01-10 06:54:48]     "pilotErrorDiag": "",
[2026-01-10 06:54:48]  *** Listing of results directory ***
[2026-01-10 06:54:48] total 446476
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 06:54:48] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc       100 Jan 10 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:54:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 00:43 run_atlas
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc       105 Jan 10 00:43 job.xml
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc      6390 Jan 10 00:43 init_data.xml
[2026-01-10 06:54:48] -rw-r--r--. 2 boinc boinc 224369758 Jan 10 00:43 EVNT.47898824._001500.pool.root.1
[2026-01-10 06:54:48] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:43 start_atlas.sh
[2026-01-10 06:54:48] drwxrwx--x. 2 boinc boinc        68 Jan 10 00:43 shared
[2026-01-10 06:54:48] -rw-r--r--. 2 boinc boinc    592395 Jan 10 00:43 input.tar.gz
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc         0 Jan 10 00:43 boinc_lockfile
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc      2520 Jan 10 00:44 pandaJob.out
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc    989374 Jan 10 00:47 agis_schedconf.cvmfs.json
[2026-01-10 06:54:48] drwx------. 5 boinc boinc      4096 Jan 10 00:48 pilot3
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc 221972438 Jan 10 06:50 HITS.47898826._039031.pool.root.1
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc       531 Jan 10 06:50 boinc_task_state.xml
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc      1010 Jan 10 06:51 memory_monitor_summary.json
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc   1516240 Jan 10 06:51 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc    551894 Jan 10 06:51 log.47898826._039031.job.log.tgz.1
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc        95 Jan 10 06:53 pilot_heartbeat.json
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc      7774 Jan 10 06:53 heartbeat.json
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc      4884 Jan 10 06:54 pilotlog.txt
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc   2925437 Jan 10 06:54 log.47898826._039031.job.log.1
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc       357 Jan 10 06:54 output.list
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc       620 Jan 10 06:54 runtime_log
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc   3491840 Jan 10 06:54 result.tar.gz
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc      8817 Jan 10 06:54 runtime_log.err
[2026-01-10 06:54:48] -rw-------. 1 boinc boinc       656 Jan 10 06:54 iB0LDm4CJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW0gKDmzaHqUo.diag
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc        28 Jan 10 06:54 wrapper_checkpoint.txt
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc      8192 Jan 10 06:54 boinc_mmap_file
[2026-01-10 06:54:48] -rw-r--r--. 1 boinc boinc     20802 Jan 10 06:54 stderr.txt
[2026-01-10 06:54:48] HITS file was successfully produced:
[2026-01-10 06:54:49] -rw-------. 1 boinc boinc 221972438 Jan 10 06:50 shared/HITS.pool.root.1
[2026-01-10 06:54:49]  *** Contents of shared directory: ***
[2026-01-10 06:54:49] total 439892
[2026-01-10 06:54:49] -rw-r--r--. 2 boinc boinc 224369758 Jan 10 00:43 ATLAS.root_0
[2026-01-10 06:54:49] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:43 start_atlas.sh
[2026-01-10 06:54:49] -rw-r--r--. 2 boinc boinc    592395 Jan 10 00:43 input.tar.gz
[2026-01-10 06:54:49] -rw-------. 1 boinc boinc 221972438 Jan 10 06:50 HITS.pool.root.1
[2026-01-10 06:54:49] -rw-------. 1 boinc boinc   3491840 Jan 10 06:54 result.tar.gz
06:54:50 (13865): run_atlas exited; CPU time 81636.865421
06:54:50 (13865): called boinc_finish(0)

</stderr_txt>
]]>

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