Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:23:47 (2385): wrapper (7.7.26015): starting
14:23:47 (2385): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 14:23:47] Arguments: --nthreads 12
[2026-01-09 14:23:47] Threads: 12
[2026-01-09 14:23:47] Checking for CVMFS
[2026-01-09 14:23:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:23:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:23:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:23:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:23:47] 2.11.2.0 2979 351471 92280 154955 3 57 12602556 20275201 1 130560 1 147792130 99.956 20311503 16103 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:23:47] CVMFS is ok
[2026-01-09 14:23:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:23:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:23:47] Further information can be found at the LHC@home message board.
[2026-01-09 14:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:23:47] Checking for apptainer binary...
[2026-01-09 14:23:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:23:47] Running /usr/bin/apptainer --version
[2026-01-09 14:23:47] apptainer version 1.3.2-1.el7
[2026-01-09 14:23:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:23:48] c-205-21.aglt2.org
[2026-01-09 14:23:48] apptainer works
[2026-01-09 14:23:48] Set ATHENA_PROC_NUMBER=12
[2026-01-09 14:23:48] Set ATHENA_CORE_NUMBER=12
[2026-01-09 14:23:48] Starting ATLAS job with PandaID=6963192076
[2026-01-09 14:23:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:05:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:05:19]  protocol_id=None
[2026-01-09 16:05:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 16:05:19]  replicas=None
[2026-01-09 16:05:19]  scope=mc23_13p6TeV
[2026-01-09 16:05:19]  status=None
[2026-01-09 16:05:19]  status_code=0
[2026-01-09 16:05:19]  storage_token=
[2026-01-09 16:05:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963192076/log.47898826._038944.job.log.tgz.1
[2026-01-09 16:05:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/28/log.47898826._038944.job.log.tgz.1
[2026-01-09 16:05:19]  workdir=None
[2026-01-09 16:05:19] ]
[2026-01-09 16:05:19] 2026-01-09 21:04:12,570 | INFO     | transferring file log.47898826._038944.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963192076/log.47898826._038944.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 16:05:19] 2026-01-09 21:04:12,570 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963192076/log.47898826._038944.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._038944.job
[2026-01-09 16:05:19] 2026-01-09 21:04:12,592 | INFO     | adding to output.list: log.47898826._038944.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/28/log.47898826._038944.job.log.tg
[2026-01-09 16:05:19] 2026-01-09 21:04:12,593 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 16:05:19] 2026-01-09 21:04:12,593 | INFO     | summary of transferred files:
[2026-01-09 16:05:19] 2026-01-09 21:04:12,593 | INFO     |  -- lfn=log.47898826._038944.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 16:05:19] 2026-01-09 21:04:12,593 | INFO     | stage-out finished correctly
[2026-01-09 16:05:19] 2026-01-09 21:04:13,115 | INFO     | time since job start (6010s) is within the limit (349056.0s)
[2026-01-09 16:05:19] 2026-01-09 21:04:13,456 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 16:05:19] 2026-01-09 21:04:14,873 | INFO     | job 6963192076 has state=finished
[2026-01-09 16:05:19] 2026-01-09 21:04:14,874 | INFO     | preparing for final server update for job 6963192076 in state='finished'
[2026-01-09 16:05:19] 2026-01-09 21:04:14,874 | INFO     | this job has now completed (state=finished)
[2026-01-09 16:05:19] 2026-01-09 21:04:14,874 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 16:05:19] 2026-01-09 21:04:14,875 | INFO     | log transfer has been attempted: DONE
[2026-01-09 16:05:19] 2026-01-09 21:04:14,875 | INFO     | job 6963192076 has finished - writing final server update
[2026-01-09 16:05:19] 2026-01-09 21:04:14,875 | INFO     | total number of processed events: 400 (read)
[2026-01-09 16:05:19] 2026-01-09 21:04:14,876 | INFO     | executing command: lscpu
[2026-01-09 16:05:19] 2026-01-09 21:04:14,901 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 16:05:19] 2026-01-09 21:04:14,973 | INFO     | monitor loop #445: job 0:6963192076 is in state 'finished'
[2026-01-09 16:05:19] 2026-01-09 21:04:14,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:05:19] 2026-01-09 21:04:15,121 | INFO     | time since job start (6012s) is within the limit (349056.0s)
[2026-01-09 16:05:19] 2026-01-09 21:04:17,126 | INFO     | time since job start (6014s) is within the limit (349056.0s)
[2026-01-09 16:05:19] 2026-01-09 21:04:17,476 | INFO     | monitor loop #446: job 0:6963192076 is in state 'finished'
[2026-01-09 16:05:19] 2026-01-09 21:04:17,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:05:19] 2026-01-09 21:04:19,131 | INFO     | time since job start (6016s) is within the limit (349056.0s)
[2026-01-09 16:05:19] 2026-01-09 21:04:19,979 | INFO     | monitor loop #447: job 0:6963192076 is in state 'finished'
[2026-01-09 16:05:19] 2026-01-09 21:04:19,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:05:19] 2026-01-09 21:04:20,754 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 16:05:19] 2026-01-09 21:04:20,757 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-09 16:05:19] 2026-01-09 21:04:20,760 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963192076/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:05:19] 2026-01-09 21:04:20,761 | INFO     | extracted standard info from prmon json
[2026-01-09 16:05:19] 2026-01-09 21:04:20,761 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:05:19] 2026-01-09 21:04:20,761 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:05:19] 2026-01-09 21:04:20,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:05:19] 2026-01-09 21:04:20,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:05:19] 2026-01-09 21:04:20,763 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:05:19] 2026-01-09 21:04:20,763 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 16:05:19] 2026-01-09 21:04:20,764 | INFO     | sum of deviations: -17217615390.000004
[2026-01-09 16:05:19] 2026-01-09 21:04:20,764 | INFO     | mean x: 1767989722.0
[2026-01-09 16:05:19] 2026-01-09 21:04:20,764 | INFO     | mean y: 2823605.6483516484
[2026-01-09 16:05:19] 2026-01-09 21:04:20,764 | INFO     | intersect: 130290273913.05736
[2026-01-09 16:05:19] 2026-01-09 21:04:20,764 | INFO     | chi2: 0.07018759029293369
[2026-01-09 16:05:19] 2026-01-09 21:04:20,764 | INFO     | current memory leak: -73.69 B/s (using 91 data points, chi2=0.07)
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | could have reported an average CPU frequency of 2136 MHz (7 samples)
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | ..............................
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | . Timing measurements:
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | . get job = 0 s
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | . initial setup = 2 s
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | . payload setup = 7 s
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | . stage-in = 0 s
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | . payload execution = 5981 s
[2026-01-09 16:05:19] 2026-01-09 21:04:20,765 | INFO     | . stage-out = 0 s
[2026-01-09 16:05:19] 2026-01-09 21:04:20,766 | INFO     | . log creation = 0 s
[2026-01-09 16:05:19] 2026-01-09 21:04:20,766 | INFO     | ..............................
[2026-01-09 16:05:19] 2026-01-09 21:04:20,846 | INFO     | 
[2026-01-09 16:05:19] 2026-01-09 21:04:20,846 | INFO     | job summary report
[2026-01-09 16:05:19] 2026-01-09 21:04:20,846 | INFO     | --------------------------------------------------
[2026-01-09 16:05:19] 2026-01-09 21:04:20,846 | INFO     | PanDA job id: 6963192076
[2026-01-09 16:05:19] 2026-01-09 21:04:20,846 | INFO     | task id: 47898826
[2026-01-09 16:05:19] 2026-01-09 21:04:20,846 | INFO     | errors: (none)
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | pilot state: finished 
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | transexitcode: 0
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | exeerrorcode: 0
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | exeerrordiag: 
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | exitcode: 0
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | exitmsg: OK
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | cpuconsumptiontime: 66018 s
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | nevents: 400
[2026-01-09 16:05:19] 2026-01-09 21:04:20,847 | INFO     | neventsw: 0
[2026-01-09 16:05:19] 2026-01-09 21:04:20,848 | INFO     | pid: 12538
[2026-01-09 16:05:19] 2026-01-09 21:04:20,848 | INFO     | pgrp: 12538
[2026-01-09 16:05:19] 2026-01-09 21:04:20,848 | INFO     | corecount: 12
[2026-01-09 16:05:19] 2026-01-09 21:04:20,848 | INFO     | event service: False
[2026-01-09 16:05:19] 2026-01-09 21:04:20,848 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 11: 2284317, 5991: 2311042, 5992: 2311041, 5993: 2320223, 5994: 2320279, 6001: 2320473}
[2026-01-09 16:05:19] 2026-01-09 21:04:20,848 | INFO     | --------------------------------------------------
[2026-01-09 16:05:19] 2026-01-09 21:04:20,848 | INFO     | 
[2026-01-09 16:05:19] 2026-01-09 21:04:20,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 16:05:19] 2026-01-09 21:04:20,870 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,870 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,870 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,871 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,873 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:05:19] 2026-01-09 21:04:20,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,873 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:05:19] 2026-01-09 21:04:20,874 | INFO     | job 6963192076 has completed (purged errors)
[2026-01-09 16:05:19] 2026-01-09 21:04:20,874 | INFO     | overall cleanup function is called
[2026-01-09 16:05:19] 2026-01-09 21:04:21,880 | INFO     | --- collectZombieJob: --- 10, [12538]
[2026-01-09 16:05:19] 2026-01-09 21:04:21,881 | INFO     | zombie collector waiting for pid 12538
[2026-01-09 16:05:19] 2026-01-09 21:04:21,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:05:19] 2026-01-09 21:04:21,881 | INFO     | collected zombie processes
[2026-01-09 16:05:19] 2026-01-09 21:04:21,881 | INFO     | will attempt to kill all subprocesses of pid=12538
[2026-01-09 16:05:19] 2026-01-09 21:04:21,974 | INFO     | process IDs to be killed: [12538] (in reverse order)
[2026-01-09 16:05:19] 2026-01-09 21:04:22,024 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:05:19] 2026-01-09 21:04:22,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:05:19] 2026-01-09 21:04:22,027 | INFO     | did not find any defunct processes belonging to 12538
[2026-01-09 16:05:19] 2026-01-09 21:04:22,031 | INFO     | did not find any defunct processes belonging to 12538
[2026-01-09 16:05:19] 2026-01-09 21:04:22,031 | INFO     | ready for new job
[2026-01-09 16:05:19] 2026-01-09 21:04:22,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:05:19] 2026-01-09 21:04:22,032 | INFO     | ***************************************
[2026-01-09 16:05:19] 2026-01-09 21:04:22,032 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:05:19] 2026-01-09 21:04:22,032 | INFO     | ***************************************
[2026-01-09 16:05:19] 2026-01-09 21:04:22,033 | INFO     | 
[2026-01-09 16:05:19] 2026-01-09 21:04:22,033 | INFO     | architecture information:
[2026-01-09 16:05:19] 2026-01-09 21:04:22,034 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:05:19] 2026-01-09 21:04:22,048 | INFO     | cat /etc/os-release:
[2026-01-09 16:05:19] NAME="CentOS Linux"
[2026-01-09 16:05:19] VERSION="7 (Core)"
[2026-01-09 16:05:19] ID="centos"
[2026-01-09 16:05:19] ID_LIKE="rhel fedora"
[2026-01-09 16:05:19] VERSION_ID="7"
[2026-01-09 16:05:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:05:19] ANSI_COLOR="0;31"
[2026-01-09 16:05:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:05:19] HOME_URL="https://www.centos.org/"
[2026-01-09 16:05:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:05:19] 
[2026-01-09 16:05:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:05:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:05:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:05:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:05:19] 
[2026-01-09 16:05:19] 2026-01-09 21:04:22,048 | INFO     | ***************************************
[2026-01-09 16:05:19] 2026-01-09 21:04:22,551 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 16:05:19] 2026-01-09 21:04:22,567 | INFO     | sufficient remaining disk space (29317136384 B)
[2026-01-09 16:05:19] 2026-01-09 21:04:22,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:05:19] 2026-01-09 21:04:22,567 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:05:19] 2026-01-09 21:04:22,568 | INFO     | update_server=False
[2026-01-09 16:05:19] 2026-01-09 21:04:22,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:05:19] 2026-01-09 21:04:22,568 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:05:19] 2026-01-09 21:04:22,948 | INFO     | all job control threads have been joined
[2026-01-09 16:05:19] 2026-01-09 21:04:23,106 | INFO     | all payload control threads have been joined
[2026-01-09 16:05:19] 2026-01-09 21:04:23,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:05:19] 2026-01-09 21:04:23,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:05:19] 2026-01-09 21:04:23,488 | INFO     | aborting loop
[2026-01-09 16:05:19] 2026-01-09 21:04:23,555 | INFO     | all data control threads have been joined
[2026-01-09 16:05:19] 2026-01-09 21:04:23,570 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:23,573 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:23,953 | INFO     | [job] control thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,008 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:05:19] 2026-01-09 21:04:24,113 | INFO     | [payload] control thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,345 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,362 | INFO     | [job] validate thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,494 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,561 | INFO     | [data] control thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,563 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,597 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:24,993 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:25,048 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:25,193 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:28,049 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:32,805 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:05:19] 2026-01-09 21:04:33,811 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:05:19] 2026-01-09 21:04:52,338 | INFO     | PID=6105 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 16:05:19] 2026-01-09 21:04:52,339 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:05:19] 2026-01-09 21:04:52,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:05:19] 2026-01-09 21:04:52,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:05:19] 2026-01-09 21:05:13,043 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:05:19] 2026-01-09 21:05:14,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065904392000)>', '<ExcThread(monitor, started 140064721991424)>']
[2026-01-09 16:05:19] 2026-01-09 21:05:14,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:05:19] 2026-01-09 21:05:14,431 | INFO     | [monitor] control thread has ended
[2026-01-09 16:05:19] 2026-01-09 21:05:19,070 | INFO     | all workflow threads have been joined
[2026-01-09 16:05:19] 2026-01-09 21:05:19,081 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:05:19] 2026-01-09 21:05:19,081 | INFO     | traces error code: 0
[2026-01-09 16:05:19] 2026-01-09 21:05:19,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:05:19] 2026-01-09 21:05:19,179 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:05:19] 2026-01-09 21:05:19,183 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:05:19] 2026-01-09 21:05:19,187 [wrapper] pilotpid: 6105
[2026-01-09 16:05:19] 2026-01-09 21:05:19,191 [wrapper] Pilot exit status: 0
[2026-01-09 16:05:19] 2026-01-09 21:05:19,208 [wrapper] pandaids: 6963192076
[2026-01-09 16:05:19] 2026-01-09 21:05:19,255 [wrapper] cleanup supervisor_pilot 11872 6106
[2026-01-09 16:05:19] 2026-01-09 21:05:19,259 [wrapper] Test setup, not cleaning
[2026-01-09 16:05:19] 2026-01-09 21:05:19,263 [wrapper] apfmon messages muted
[2026-01-09 16:05:19] 2026-01-09 21:05:19,267 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:05:19] 2026-01-09 21:05:19,270 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:05:19]  *** Error codes and diagnostics ***
[2026-01-09 16:05:19]     "exeErrorCode": 0,
[2026-01-09 16:05:19]     "exeErrorDiag": "",
[2026-01-09 16:05:19]     "pilotErrorCode": 0,
[2026-01-09 16:05:19]     "pilotErrorDiag": "",
[2026-01-09 16:05:19]  *** Listing of results directory ***
[2026-01-09 16:05:19] total 435572
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 16:05:19] -rwx------ 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas       100 Jan  9 14:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:05:19] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 14:23 run_atlas
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas       105 Jan  9 14:23 job.xml
[2026-01-09 16:05:19] -rw-r--r-- 2 boincer umatlas 226299451 Jan  9 14:23 EVNT.47898824._001496.pool.root.1
[2026-01-09 16:05:19] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:23 start_atlas.sh
[2026-01-09 16:05:19] drwxrwx--x 2 boincer umatlas      4096 Jan  9 14:23 shared
[2026-01-09 16:05:19] -rw-r--r-- 2 boincer umatlas    592394 Jan  9 14:23 input.tar.gz
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas         0 Jan  9 14:23 boinc_lockfile
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 14:23 pandaJob.out
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas        57 Jan  9 14:23 setup.sh.local
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas    989364 Jan  9 14:24 agis_schedconf.cvmfs.json
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas   1516240 Jan  9 14:24 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:05:19] drwx------ 5 boincer umatlas      4096 Jan  9 14:24 pilot3
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 16:01 init_data.xml
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas 213270982 Jan  9 16:03 HITS.47898826._038944.pool.root.1
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas       529 Jan  9 16:03 boinc_task_state.xml
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas      1047 Jan  9 16:04 memory_monitor_summary.json
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas    413980 Jan  9 16:04 log.47898826._038944.job.log.tgz.1
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas      7851 Jan  9 16:04 heartbeat.json
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas        95 Jan  9 16:04 pilot_heartbeat.json
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 16:05 boinc_mmap_file
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas        27 Jan  9 16:05 wrapper_checkpoint.txt
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas      4817 Jan  9 16:05 pilotlog.txt
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas    854212 Jan  9 16:05 log.47898826._038944.job.log.1
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas       357 Jan  9 16:05 output.list
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas       620 Jan  9 16:05 runtime_log
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas   1290240 Jan  9 16:05 result.tar.gz
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas       659 Jan  9 16:05 S8OODmrCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0DmKDmo8APzm.diag
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 16:05 runtime_log.err
[2026-01-09 16:05:19] -rw-r--r-- 1 boincer umatlas     21854 Jan  9 16:05 stderr.txt
[2026-01-09 16:05:19] HITS file was successfully produced:
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas 213270982 Jan  9 16:03 shared/HITS.pool.root.1
[2026-01-09 16:05:19]  *** Contents of shared directory: ***
[2026-01-09 16:05:19] total 431132
[2026-01-09 16:05:19] -rw-r--r-- 2 boincer umatlas 226299451 Jan  9 14:23 ATLAS.root_0
[2026-01-09 16:05:19] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:23 start_atlas.sh
[2026-01-09 16:05:19] -rw-r--r-- 2 boincer umatlas    592394 Jan  9 14:23 input.tar.gz
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas 213270982 Jan  9 16:03 HITS.pool.root.1
[2026-01-09 16:05:19] -rw------- 1 boincer umatlas   1290240 Jan  9 16:05 result.tar.gz
16:05:20 (2385): run_atlas exited; CPU time 65997.774863
16:05:20 (2385): called boinc_finish(0)

</stderr_txt>
]]>

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