Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:01:57 (1635341): wrapper (7.7.26015): starting
15:01:57 (1635341): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:01:57] Arguments: --nthreads 8
[2026-01-09 15:01:57] Threads: 8
[2026-01-09 15:01:57] Checking for CVMFS
[2026-01-09 15:01:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:01:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:01:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:01:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:01:59] 2.13.3.0 7100 93800 154748 154955 1 196 33953180 40960001 29794 16776704 0 1066297716 99.694 814800548 49173 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 15:01:59] CVMFS is ok
[2026-01-09 15:01:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:01:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:01:59] Further information can be found at the LHC@home message board.
[2026-01-09 15:01:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:01:59] Checking for apptainer binary...
[2026-01-09 15:01:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:01:59] Running /usr/bin/apptainer --version
[2026-01-09 15:01:59] apptainer version 1.4.5-2.el9
[2026-01-09 15:01:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:02:00] c8-6-10.aglt2.org
[2026-01-09 15:02:00] apptainer works
[2026-01-09 15:02:00] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:02:00] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:02:00] Starting ATLAS job with PandaID=6963192075
[2026-01-09 15:02:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:27:15]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:27:15]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6963192075/log.47898826._038943.job.log.tgz.1
[2026-01-09 16:27:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/2e/log.47898826._038943.job.log.tgz.1
[2026-01-09 16:27:15]  workdir=None
[2026-01-09 16:27:15] ]
[2026-01-09 16:27:15] 2026-01-09 21:26:29,418 | INFO     | transferring file log.47898826._038943.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6963192075/log.47898826._038943.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 16:27:15] 2026-01-09 21:26:29,418 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6963192075/log.47898826._038943.job.log.tgz.1 /tmp/boinchome/slots/1/log.47898826._038943.job
[2026-01-09 16:27:15] 2026-01-09 21:26:29,440 | INFO     | adding to output.list: log.47898826._038943.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/2e/log.47898826._038943.job.log.tg
[2026-01-09 16:27:15] 2026-01-09 21:26:29,440 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 16:27:15] 2026-01-09 21:26:29,440 | INFO     | summary of transferred files:
[2026-01-09 16:27:15] 2026-01-09 21:26:29,440 | INFO     |  -- lfn=log.47898826._038943.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 16:27:15] 2026-01-09 21:26:29,441 | INFO     | stage-out finished correctly
[2026-01-09 16:27:15] 2026-01-09 21:26:30,590 | INFO     | time since job start (5026s) is within the limit (349056.0s)
[2026-01-09 16:27:15] 2026-01-09 21:26:32,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 16:27:15] 2026-01-09 21:26:32,599 | INFO     | time since job start (5028s) is within the limit (349056.0s)
[2026-01-09 16:27:15] 2026-01-09 21:26:33,896 | WARNING  | process 1669871 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 16:27:15] 2026-01-09 21:26:33,896 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963192075/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:27:15] 2026-01-09 21:26:34,355 | INFO     | number of running child processes to parent process 1669871: 1
[2026-01-09 16:27:15] 2026-01-09 21:26:34,355 | INFO     | maximum number of monitored processes: 6
[2026-01-09 16:27:15] 2026-01-09 21:26:34,606 | INFO     | time since job start (5030s) is within the limit (349056.0s)
[2026-01-09 16:27:15] 2026-01-09 21:26:34,705 | INFO     | job 6963192075 has state=finished
[2026-01-09 16:27:15] 2026-01-09 21:26:34,705 | INFO     | preparing for final server update for job 6963192075 in state='finished'
[2026-01-09 16:27:15] 2026-01-09 21:26:34,705 | INFO     | this job has now completed (state=finished)
[2026-01-09 16:27:15] 2026-01-09 21:26:34,705 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 16:27:15] 2026-01-09 21:26:34,705 | INFO     | log transfer has been attempted: DONE
[2026-01-09 16:27:15] 2026-01-09 21:26:34,705 | INFO     | job 6963192075 has finished - writing final server update
[2026-01-09 16:27:15] 2026-01-09 21:26:34,706 | INFO     | total number of processed events: 400 (read)
[2026-01-09 16:27:15] 2026-01-09 21:26:34,708 | INFO     | executing command: lscpu
[2026-01-09 16:27:15] 2026-01-09 21:26:34,776 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 16:27:15] 2026-01-09 21:26:36,613 | INFO     | time since job start (5032s) is within the limit (349056.0s)
[2026-01-09 16:27:15] 2026-01-09 21:26:36,865 | INFO     | monitor loop #335: job 0:6963192075 is in state 'finished'
[2026-01-09 16:27:15] 2026-01-09 21:26:36,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:27:15] 2026-01-09 21:26:38,206 | INFO     | PID=1645160 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 16:27:15] 2026-01-09 21:26:38,206 | INFO     | .. there are 32 such processes running
[2026-01-09 16:27:15] 2026-01-09 21:26:39,207 | INFO     | time since job start (5035s) is within the limit (349056.0s)
[2026-01-09 16:27:15] 2026-01-09 21:26:39,370 | INFO     | monitor loop #336: job 0:6963192075 is in state 'finished'
[2026-01-09 16:27:15] 2026-01-09 21:26:39,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:27:15] 2026-01-09 21:26:41,214 | INFO     | time since job start (5037s) is within the limit (349056.0s)
[2026-01-09 16:27:15] 2026-01-09 21:26:41,249 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 16:27:15] 2026-01-09 21:26:41,253 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9849140625006
[2026-01-09 16:27:15] 2026-01-09 21:26:41,265 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963192075/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:27:15] 2026-01-09 21:26:41,266 | INFO     | extracted standard info from prmon json
[2026-01-09 16:27:15] 2026-01-09 21:26:41,266 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:27:15] 2026-01-09 21:26:41,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:27:15] 2026-01-09 21:26:41,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:27:15] 2026-01-09 21:26:41,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:27:15] 2026-01-09 21:26:41,267 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:27:15] 2026-01-09 21:26:41,267 | INFO     | sum of square deviations: 130805484.74666643
[2026-01-09 16:27:15] 2026-01-09 21:26:41,267 | INFO     | sum of deviations: -4750563964.680001
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | mean x: 1767991577.1733334
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | mean y: 2550902.36
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | intersect: 64212068512.75551
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | chi2: 0.10992179664413267
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | current memory leak: -36.32 B/s (using 75 data points, chi2=0.11)
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | ..............................
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | . Timing measurements:
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | . get job = 0 s
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | . initial setup = 5 s
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | . payload setup = 10 s
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | . stage-in = 0 s
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | . payload execution = 4977 s
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | . stage-out = 0 s
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | . log creation = 0 s
[2026-01-09 16:27:15] 2026-01-09 21:26:41,268 | INFO     | ..............................
[2026-01-09 16:27:15] 2026-01-09 21:26:41,316 | INFO     | 
[2026-01-09 16:27:15] 2026-01-09 21:26:41,316 | INFO     | job summary report
[2026-01-09 16:27:15] 2026-01-09 21:26:41,316 | INFO     | --------------------------------------------------
[2026-01-09 16:27:15] 2026-01-09 21:26:41,316 | INFO     | PanDA job id: 6963192075
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | task id: 47898826
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | errors: (none)
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | pilot state: finished 
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | transexitcode: 0
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | exeerrorcode: 0
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | exeerrordiag: 
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | exitcode: 0
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | exitmsg: OK
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | cpuconsumptiontime: 30896 s
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | nevents: 400
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | neventsw: 0
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | pid: 1669871
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | pgrp: 1669871
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | corecount: 8
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | event service: False
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 19: 2284289, 23: 2284317, 4990: 2310794, 4992: 2319792, 4995: 2319848, 5003: 2320042}
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | --------------------------------------------------
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | 
[2026-01-09 16:27:15] 2026-01-09 21:26:41,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | job 6963192075 has completed (purged errors)
[2026-01-09 16:27:15] 2026-01-09 21:26:41,335 | INFO     | overall cleanup function is called
[2026-01-09 16:27:15] 2026-01-09 21:26:42,343 | INFO     | --- collectZombieJob: --- 10, [1669871]
[2026-01-09 16:27:15] 2026-01-09 21:26:42,343 | INFO     | zombie collector waiting for pid 1669871
[2026-01-09 16:27:15] 2026-01-09 21:26:42,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:27:15] 2026-01-09 21:26:42,343 | INFO     | collected zombie processes
[2026-01-09 16:27:15] 2026-01-09 21:26:42,343 | INFO     | will attempt to kill all subprocesses of pid=1669871
[2026-01-09 16:27:15] 2026-01-09 21:26:42,797 | INFO     | process IDs to be killed: [1669871] (in reverse order)
[2026-01-09 16:27:15] 2026-01-09 21:26:42,976 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:27:15] 2026-01-09 21:26:42,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:27:15] 2026-01-09 21:26:42,999 | INFO     | did not find any defunct processes belonging to 1669871
[2026-01-09 16:27:15] 2026-01-09 21:26:43,018 | INFO     | did not find any defunct processes belonging to 1669871
[2026-01-09 16:27:15] 2026-01-09 21:26:43,018 | INFO     | ready for new job
[2026-01-09 16:27:15] 2026-01-09 21:26:43,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:27:15] 2026-01-09 21:26:43,019 | INFO     | ***************************************
[2026-01-09 16:27:15] 2026-01-09 21:26:43,019 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:27:15] 2026-01-09 21:26:43,019 | INFO     | ***************************************
[2026-01-09 16:27:15] 2026-01-09 21:26:43,019 | INFO     | 
[2026-01-09 16:27:15] 2026-01-09 21:26:43,024 | INFO     | architecture information:
[2026-01-09 16:27:15] 2026-01-09 21:26:43,024 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:27:15] 2026-01-09 21:26:43,041 | INFO     | cat /etc/os-release:
[2026-01-09 16:27:15] NAME="CentOS Linux"
[2026-01-09 16:27:15] VERSION="7 (Core)"
[2026-01-09 16:27:15] ID="centos"
[2026-01-09 16:27:15] ID_LIKE="rhel fedora"
[2026-01-09 16:27:15] VERSION_ID="7"
[2026-01-09 16:27:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:27:15] ANSI_COLOR="0;31"
[2026-01-09 16:27:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:27:15] HOME_URL="https://www.centos.org/"
[2026-01-09 16:27:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:27:15] 
[2026-01-09 16:27:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:27:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:27:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:27:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:27:15] 
[2026-01-09 16:27:15] 2026-01-09 21:26:43,042 | INFO     | ***************************************
[2026-01-09 16:27:15] 2026-01-09 21:26:43,545 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 16:27:15] 2026-01-09 21:26:43,593 | INFO     | sufficient remaining disk space (169590390784 B)
[2026-01-09 16:27:15] 2026-01-09 21:26:43,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:27:15] 2026-01-09 21:26:43,594 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:27:15] 2026-01-09 21:26:43,594 | INFO     | update_server=False
[2026-01-09 16:27:15] 2026-01-09 21:26:43,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:27:15] 2026-01-09 21:26:43,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:27:15] 2026-01-09 21:26:43,595 | INFO     | aborting loop
[2026-01-09 16:27:15] 2026-01-09 21:26:43,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:27:15] 2026-01-09 21:26:44,034 | INFO     | all data control threads have been joined
[2026-01-09 16:27:15] 2026-01-09 21:26:44,461 | INFO     | all payload control threads have been joined
[2026-01-09 16:27:15] 2026-01-09 21:26:44,528 | INFO     | all job control threads have been joined
[2026-01-09 16:27:15] 2026-01-09 21:26:44,600 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:44,601 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:44,671 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:44,694 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:45,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:27:15] 2026-01-09 21:26:45,039 | INFO     | [data] control thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:45,050 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:45,411 | INFO     | [job] validate thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:45,468 | INFO     | [payload] control thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:45,477 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:45,534 | INFO     | [job] control thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:45,555 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:45,909 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:46,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:27:15] 2026-01-09 21:26:47,030 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:47,340 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:47,604 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:52,547 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:27:15] 2026-01-09 21:26:54,414 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:27:15] 2026-01-09 21:26:55,420 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:27:15] 2026-01-09 21:26:57,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972462561088)>', '<ExcThread(monitor, started 139971834930944)>']
[2026-01-09 16:27:15] 2026-01-09 21:27:02,333 | INFO     | all workflow threads have been joined
[2026-01-09 16:27:15] 2026-01-09 21:27:02,333 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:27:15] 2026-01-09 21:27:02,333 | INFO     | traces error code: 0
[2026-01-09 16:27:15] 2026-01-09 21:27:02,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:27:15] 2026-01-09 21:27:14,853 | INFO     | PID=1645160 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:27:15] 2026-01-09 21:27:14,854 | INFO     | .. there are 32 such processes running
[2026-01-09 16:27:15] 2026-01-09 21:27:14,854 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:27:15] 2026-01-09 21:27:14,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:27:15] 2026-01-09 21:27:14,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:27:15] 2026-01-09 21:27:14,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:27:15] 2026-01-09 21:27:14,854 | INFO     | [monitor] control thread has ended
[2026-01-09 16:27:15] 2026-01-09 21:27:14,965 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:27:15] 2026-01-09 21:27:14,967 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:27:15] 2026-01-09 21:27:14,970 [wrapper] pilotpid: 1645160
[2026-01-09 16:27:15] 2026-01-09 21:27:14,972 [wrapper] Pilot exit status: 0
[2026-01-09 16:27:15] 2026-01-09 21:27:15,010 [wrapper] pandaids: 6963192075
[2026-01-09 16:27:15] 2026-01-09 21:27:15,155 [wrapper] cleanup supervisor_pilot 2186104 1645161
[2026-01-09 16:27:15] 2026-01-09 21:27:15,157 [wrapper] Test setup, not cleaning
[2026-01-09 16:27:15] 2026-01-09 21:27:15,160 [wrapper] apfmon messages muted
[2026-01-09 16:27:15] 2026-01-09 21:27:15,162 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:27:15] 2026-01-09 21:27:15,164 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:27:15]  *** Error codes and diagnostics ***
[2026-01-09 16:27:15]     "exeErrorCode": 0,
[2026-01-09 16:27:15]     "exeErrorDiag": "",
[2026-01-09 16:27:15]     "pilotErrorCode": 0,
[2026-01-09 16:27:15]     "pilotErrorDiag": "",
[2026-01-09 16:27:15]  *** Listing of results directory ***
[2026-01-09 16:27:15] total 440948
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 16:27:15] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas       100 Jan  9 15:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:27:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 15:01 run_atlas
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas       105 Jan  9 15:01 job.xml
[2026-01-09 16:27:15] -rw-r--r--. 2 boincer umatlas 226299451 Jan  9 15:01 EVNT.47898824._001496.pool.root.1
[2026-01-09 16:27:15] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:01 start_atlas.sh
[2026-01-09 16:27:15] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 15:01 shared
[2026-01-09 16:27:15] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 15:01 input.tar.gz
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas         0 Jan  9 15:01 boinc_lockfile
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 15:02 pandaJob.out
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas        57 Jan  9 15:02 setup.sh.local
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas    989364 Jan  9 15:02 agis_schedconf.cvmfs.json
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:27:15] drwx------. 5 boincer umatlas      4096 Jan  9 15:02 pilot3
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas      7171 Jan  9 16:18 init_data.xml
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas 219234280 Jan  9 16:26 HITS.47898826._038943.pool.root.1
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas       529 Jan  9 16:26 boinc_task_state.xml
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas      1033 Jan  9 16:26 memory_monitor_summary.json
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas    336298 Jan  9 16:26 log.47898826._038943.job.log.tgz.1
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas      7771 Jan  9 16:26 heartbeat.json
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:27 boinc_mmap_file
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas        27 Jan  9 16:27 wrapper_checkpoint.txt
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas       823 Jan  9 16:27 pilotlog.txt
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas        95 Jan  9 16:27 pilot_heartbeat.json
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas    707235 Jan  9 16:27 log.47898826._038943.job.log.1
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas       357 Jan  9 16:27 output.list
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:27 runtime_log
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas   1064960 Jan  9 16:27 result.tar.gz
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas      9337 Jan  9 16:27 runtime_log.err
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas       651 Jan  9 16:27 dn0LDmdCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmABmKDmjXINFo.diag
[2026-01-09 16:27:15] -rw-r--r--. 1 boincer umatlas     22435 Jan  9 16:27 stderr.txt
[2026-01-09 16:27:15] HITS file was successfully produced:
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas 219234280 Jan  9 16:26 shared/HITS.pool.root.1
[2026-01-09 16:27:15]  *** Contents of shared directory: ***
[2026-01-09 16:27:15] total 436732
[2026-01-09 16:27:15] -rw-r--r--. 2 boincer umatlas 226299451 Jan  9 15:01 ATLAS.root_0
[2026-01-09 16:27:15] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:01 start_atlas.sh
[2026-01-09 16:27:15] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 15:01 input.tar.gz
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas 219234280 Jan  9 16:26 HITS.pool.root.1
[2026-01-09 16:27:15] -rw-------. 1 boincer umatlas   1064960 Jan  9 16:27 result.tar.gz
16:27:17 (1635341): run_atlas exited; CPU time 31055.335006
16:27:17 (1635341): called boinc_finish(0)

</stderr_txt>
]]>

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