Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:10:35 (25825): wrapper (7.7.26015): starting
14:10:35 (25825): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:10:35] Arguments: --nthreads 8
[2026-01-09 14:10:35] Threads: 8
[2026-01-09 14:10:35] Checking for CVMFS
[2026-01-09 14:10:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:10:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:10:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:10:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:10:35] 2.11.2.0 4697 181427 135052 154954 3 56 16537390 18432000 1009 130560 0 122233713 99.979 7079889 34189 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:10:35] CVMFS is ok
[2026-01-09 14:10:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:10:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:10:35] Further information can be found at the LHC@home message board.
[2026-01-09 14:10:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:10:35] Checking for apptainer binary...
[2026-01-09 14:10:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:10:35] Running /usr/bin/apptainer --version
[2026-01-09 14:10:36] apptainer version 1.3.2-1.el7
[2026-01-09 14:10:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:10:37] c-206-21.aglt2.org
[2026-01-09 14:10:37] apptainer works
[2026-01-09 14:10:37] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:10:37] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:10:37] Starting ATLAS job with PandaID=6963190138
[2026-01-09 14:10:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:42:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:42:46] 2026-01-09 23:42:11,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,561 | INFO     | time since job start (16283s) is within the limit (349056.0s)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,968 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:42:46] 2026-01-09 23:42:12,974 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1779.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,976 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963190138/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,977 | INFO     | extracted standard info from prmon json
[2026-01-09 18:42:46] 2026-01-09 23:42:12,977 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:42:46] 2026-01-09 23:42:12,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:42:46] 2026-01-09 23:42:12,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:42:46] 2026-01-09 23:42:12,978 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:42:46] 2026-01-09 23:42:12,981 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:42:46] 2026-01-09 23:42:12,982 | INFO     | sum of square deviations: 5902093918.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,983 | INFO     | sum of deviations: 38401056597.99999
[2026-01-09 18:42:46] 2026-01-09 23:42:12,983 | INFO     | mean x: 1767993989.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,984 | INFO     | mean y: 2466349.052434457
[2026-01-09 18:42:46] 2026-01-09 23:42:12,984 | INFO     | intersect: -11500711706.01978
[2026-01-09 18:42:46] 2026-01-09 23:42:12,984 | INFO     | chi2: 2.256397916682053
[2026-01-09 18:42:46] 2026-01-09 23:42:12,984 | INFO     | sum of square deviations: 5576683165.5
[2026-01-09 18:42:46] 2026-01-09 23:42:12,986 | INFO     | sum of deviations: 55221705094.00001
[2026-01-09 18:42:46] 2026-01-09 23:42:12,986 | INFO     | mean x: 1767993836.5
[2026-01-09 18:42:46] 2026-01-09 23:42:12,986 | INFO     | mean y: 2474105.526717557
[2026-01-09 18:42:46] 2026-01-09 23:42:12,986 | INFO     | intersect: -17504641029.004887
[2026-01-09 18:42:46] 2026-01-09 23:42:12,987 | INFO     | chi2: 1.4705616698191393
[2026-01-09 18:42:46] 2026-01-09 23:42:12,987 | INFO     | current chi2=1.4705616698191393 (change=34.82702412783894 %)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,987 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,989 | INFO     | sum of deviations: 54022301622.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,989 | INFO     | mean x: 1767993684.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,989 | INFO     | mean y: 2473521.5019455254
[2026-01-09 18:42:46] 2026-01-09 23:42:12,989 | INFO     | intersect: -18143596149.49059
[2026-01-09 18:42:46] 2026-01-09 23:42:12,989 | INFO     | chi2: 1.4706431422986268
[2026-01-09 18:42:46] 2026-01-09 23:42:12,990 | INFO     | current chi2=1.4706431422986268 (change=-0.0055402286867406395 %)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,990 | INFO     | right removable region: 256
[2026-01-09 18:42:46] 2026-01-09 23:42:12,990 | INFO     | sum of square deviations: 5576683165.5
[2026-01-09 18:42:46] 2026-01-09 23:42:12,992 | INFO     | sum of deviations: -4147115011.9999866
[2026-01-09 18:42:46] 2026-01-09 23:42:12,992 | INFO     | mean x: 1767994141.5
[2026-01-09 18:42:46] 2026-01-09 23:42:12,992 | INFO     | mean y: 2486139.3587786257
[2026-01-09 18:42:46] 2026-01-09 23:42:12,992 | INFO     | intersect: 1317259603.7546697
[2026-01-09 18:42:46] 2026-01-09 23:42:12,992 | INFO     | chi2: 0.8285042927697668
[2026-01-09 18:42:46] 2026-01-09 23:42:12,992 | INFO     | current chi2=0.8285042927697668 (change=63.281995314547586 %)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,993 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,994 | INFO     | sum of deviations: -10165058422.000004
[2026-01-09 18:42:46] 2026-01-09 23:42:12,994 | INFO     | mean x: 1767994294.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,995 | INFO     | mean y: 2489050.326848249
[2026-01-09 18:42:46] 2026-01-09 23:42:12,995 | INFO     | intersect: 3416929317.3789926
[2026-01-09 18:42:46] 2026-01-09 23:42:12,995 | INFO     | chi2: 0.802910788899916
[2026-01-09 18:42:46] 2026-01-09 23:42:12,995 | INFO     | current chi2=0.802910788899916 (change=3.089121455760882 %)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,995 | INFO     | left removable region: 20
[2026-01-09 18:42:46] 2026-01-09 23:42:12,995 | INFO     | sum of square deviations: 4075741535.0
[2026-01-09 18:42:46] 2026-01-09 23:42:12,997 | INFO     | sum of deviations: 3958819571.5
[2026-01-09 18:42:46] 2026-01-09 23:42:12,997 | INFO     | mean x: 1767994263.5
[2026-01-09 18:42:46] 2026-01-09 23:42:12,997 | INFO     | mean y: 2498899.622881356
[2026-01-09 18:42:46] 2026-01-09 23:42:12,997 | INFO     | intersect: -1714776406.6100807
[2026-01-09 18:42:46] 2026-01-09 23:42:12,997 | INFO     | chi2: 0.001197109764674225
[2026-01-09 18:42:46] 2026-01-09 23:42:12,998 | INFO     | current memory leak: 0.97 B/s (using 236 data points, chi2=0.00)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,998 | INFO     | could have reported an average CPU frequency of 2352 MHz (12 samples)
[2026-01-09 18:42:46] 2026-01-09 23:42:12,998 | INFO     | ..............................
[2026-01-09 18:42:46] 2026-01-09 23:42:12,998 | INFO     | . Timing measurements:
[2026-01-09 18:42:46] 2026-01-09 23:42:12,998 | INFO     | . get job = 0 s
[2026-01-09 18:42:46] 2026-01-09 23:42:12,998 | INFO     | . initial setup = 2 s
[2026-01-09 18:42:46] 2026-01-09 23:42:12,998 | INFO     | . payload setup = 6 s
[2026-01-09 18:42:46] 2026-01-09 23:42:12,999 | INFO     | . stage-in = 0 s
[2026-01-09 18:42:46] 2026-01-09 23:42:12,999 | INFO     | . payload execution = 16247 s
[2026-01-09 18:42:46] 2026-01-09 23:42:12,999 | INFO     | . stage-out = 1 s
[2026-01-09 18:42:46] 2026-01-09 23:42:12,999 | INFO     | . log creation = 0 s
[2026-01-09 18:42:46] 2026-01-09 23:42:12,999 | INFO     | ..............................
[2026-01-09 18:42:46] 2026-01-09 23:42:13,074 | INFO     | 
[2026-01-09 18:42:46] 2026-01-09 23:42:13,074 | INFO     | job summary report
[2026-01-09 18:42:46] 2026-01-09 23:42:13,074 | INFO     | --------------------------------------------------
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | PanDA job id: 6963190138
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | task id: 47898826
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | errors: (none)
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | pilot state: finished 
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | transexitcode: 0
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | exeerrorcode: 0
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | exeerrordiag: 
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | exitcode: 0
[2026-01-09 18:42:46] 2026-01-09 23:42:13,075 | INFO     | exitmsg: OK
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | cpuconsumptiontime: 124369 s
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | nevents: 400
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | neventsw: 0
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | pid: 3694
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | pgrp: 3694
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | corecount: 8
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | event service: False
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | sizes: {0: 2283971, 4: 2284233, 11: 2284261, 16258: 2315669, 16261: 2324667, 16264: 2324723, 16268: 2325045}
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | --------------------------------------------------
[2026-01-09 18:42:46] 2026-01-09 23:42:13,076 | INFO     | 
[2026-01-09 18:42:46] 2026-01-09 23:42:13,077 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 18:42:46] 2026-01-09 23:42:13,098 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,098 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,098 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,098 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,100 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:42:46] 2026-01-09 23:42:13,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,100 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:42:46] 2026-01-09 23:42:13,100 | INFO     | job 6963190138 has completed (purged errors)
[2026-01-09 18:42:46] 2026-01-09 23:42:13,100 | INFO     | overall cleanup function is called
[2026-01-09 18:42:46] 2026-01-09 23:42:14,108 | INFO     | --- collectZombieJob: --- 10, [3694]
[2026-01-09 18:42:46] 2026-01-09 23:42:14,108 | INFO     | zombie collector waiting for pid 3694
[2026-01-09 18:42:46] 2026-01-09 23:42:14,108 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:42:46] 2026-01-09 23:42:14,108 | INFO     | collected zombie processes
[2026-01-09 18:42:46] 2026-01-09 23:42:14,108 | INFO     | will attempt to kill all subprocesses of pid=3694
[2026-01-09 18:42:46] 2026-01-09 23:42:14,218 | INFO     | process IDs to be killed: [3694] (in reverse order)
[2026-01-09 18:42:46] 2026-01-09 23:42:14,262 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:42:46] 2026-01-09 23:42:14,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:42:46] 2026-01-09 23:42:14,265 | INFO     | did not find any defunct processes belonging to 3694
[2026-01-09 18:42:46] 2026-01-09 23:42:14,267 | INFO     | did not find any defunct processes belonging to 3694
[2026-01-09 18:42:46] 2026-01-09 23:42:14,267 | INFO     | ready for new job
[2026-01-09 18:42:46] 2026-01-09 23:42:14,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:42:46] 2026-01-09 23:42:14,269 | INFO     | ***************************************
[2026-01-09 18:42:46] 2026-01-09 23:42:14,269 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:42:46] 2026-01-09 23:42:14,269 | INFO     | ***************************************
[2026-01-09 18:42:46] 2026-01-09 23:42:14,269 | INFO     | 
[2026-01-09 18:42:46] 2026-01-09 23:42:14,270 | INFO     | architecture information:
[2026-01-09 18:42:46] 2026-01-09 23:42:14,271 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:42:46] 2026-01-09 23:42:14,282 | INFO     | cat /etc/os-release:
[2026-01-09 18:42:46] NAME="CentOS Linux"
[2026-01-09 18:42:46] VERSION="7 (Core)"
[2026-01-09 18:42:46] ID="centos"
[2026-01-09 18:42:46] ID_LIKE="rhel fedora"
[2026-01-09 18:42:46] VERSION_ID="7"
[2026-01-09 18:42:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:42:46] ANSI_COLOR="0;31"
[2026-01-09 18:42:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:42:46] HOME_URL="https://www.centos.org/"
[2026-01-09 18:42:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:42:46] 
[2026-01-09 18:42:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:42:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:42:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:42:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:42:46] 
[2026-01-09 18:42:46] 2026-01-09 23:42:14,282 | INFO     | ***************************************
[2026-01-09 18:42:46] 2026-01-09 23:42:14,785 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 18:42:46] 2026-01-09 23:42:14,800 | INFO     | sufficient remaining disk space (27868004352 B)
[2026-01-09 18:42:46] 2026-01-09 23:42:14,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:42:46] 2026-01-09 23:42:14,800 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:42:46] 2026-01-09 23:42:14,800 | INFO     | update_server=False
[2026-01-09 18:42:46] 2026-01-09 23:42:14,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:42:46] 2026-01-09 23:42:14,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:42:46] 2026-01-09 23:42:14,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:42:46] 2026-01-09 23:42:14,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:42:46] 2026-01-09 23:42:15,032 | INFO     | all job control threads have been joined
[2026-01-09 18:42:46] 2026-01-09 23:42:15,072 | INFO     | all data control threads have been joined
[2026-01-09 18:42:46] 2026-01-09 23:42:15,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:42:46] 2026-01-09 23:42:15,332 | INFO     | aborting loop
[2026-01-09 18:42:46] 2026-01-09 23:42:15,806 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:15,806 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,037 | INFO     | [job] control thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,039 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:42:46] 2026-01-09 23:42:16,076 | INFO     | [data] control thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,088 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,195 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,233 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,248 | INFO     | [job] validate thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,260 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,277 | INFO     | all payload control threads have been joined
[2026-01-09 18:42:46] 2026-01-09 23:42:16,337 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,582 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,747 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:16,805 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:17,100 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:17,283 | INFO     | [payload] control thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:18,807 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:42:46] 2026-01-09 23:42:18,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139654852986688)>', '<ExcThread(monitor, started 139654233822976)>']
[2026-01-09 18:42:46] 2026-01-09 23:42:23,832 | INFO     | all workflow threads have been joined
[2026-01-09 18:42:46] 2026-01-09 23:42:23,832 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:42:46] 2026-01-09 23:42:23,833 | INFO     | traces error code: 0
[2026-01-09 18:42:46] 2026-01-09 23:42:23,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:42:46] 2026-01-09 23:42:45,781 | INFO     | PID=29527 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 18:42:46] 2026-01-09 23:42:45,781 | INFO     | .. there are 3 such processes running
[2026-01-09 18:42:46] 2026-01-09 23:42:45,782 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:42:46] 2026-01-09 23:42:45,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:42:46] 2026-01-09 23:42:45,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:42:46] 2026-01-09 23:42:45,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:42:46] 2026-01-09 23:42:45,782 | INFO     | [monitor] control thread has ended
[2026-01-09 18:42:46] 2026-01-09 23:42:45,873 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:42:46] 2026-01-09 23:42:45,877 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:42:46] 2026-01-09 23:42:45,881 [wrapper] pilotpid: 29527
[2026-01-09 18:42:46] 2026-01-09 23:42:45,884 [wrapper] Pilot exit status: 0
[2026-01-09 18:42:46] 2026-01-09 23:42:45,896 [wrapper] pandaids: 6963190138
[2026-01-09 18:42:46] 2026-01-09 23:42:45,943 [wrapper] cleanup supervisor_pilot 28592 29528
[2026-01-09 18:42:46] 2026-01-09 23:42:45,947 [wrapper] Test setup, not cleaning
[2026-01-09 18:42:46] 2026-01-09 23:42:45,950 [wrapper] apfmon messages muted
[2026-01-09 18:42:46] 2026-01-09 23:42:45,954 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:42:46] 2026-01-09 23:42:45,958 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:42:46]  *** Error codes and diagnostics ***
[2026-01-09 18:42:46]     "exeErrorCode": 0,
[2026-01-09 18:42:46]     "exeErrorDiag": "",
[2026-01-09 18:42:46]     "pilotErrorCode": 0,
[2026-01-09 18:42:46]     "pilotErrorDiag": "",
[2026-01-09 18:42:46]  *** Listing of results directory ***
[2026-01-09 18:42:46] total 440864
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 18:42:46] -rwx------ 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas       100 Jan  9 14:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:42:46] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 14:10 run_atlas
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas       105 Jan  9 14:10 job.xml
[2026-01-09 18:42:46] -rw-r--r-- 2 boincer umatlas 224857037 Jan  9 14:10 EVNT.47898824._001487.pool.root.1
[2026-01-09 18:42:46] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:10 start_atlas.sh
[2026-01-09 18:42:46] drwxrwx--x 2 boincer umatlas      4096 Jan  9 14:10 shared
[2026-01-09 18:42:46] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 14:10 input.tar.gz
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas         0 Jan  9 14:10 boinc_lockfile
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 14:10 pandaJob.out
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas        57 Jan  9 14:10 setup.sh.local
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas    989372 Jan  9 14:10 agis_schedconf.cvmfs.json
[2026-01-09 18:42:46] drwx------ 5 boincer umatlas      4096 Jan  9 14:10 pilot3
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 18:36 init_data.xml
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas 217158311 Jan  9 18:41 HITS.47898826._038723.pool.root.1
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas       532 Jan  9 18:41 boinc_task_state.xml
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas      1055 Jan  9 18:41 memory_monitor_summary.json
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas        95 Jan  9 18:42 pilot_heartbeat.json
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas   1516240 Jan  9 18:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas    506047 Jan  9 18:42 log.47898826._038723.job.log.tgz.1
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas      7863 Jan  9 18:42 heartbeat.json
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 18:42 boinc_mmap_file
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas        29 Jan  9 18:42 wrapper_checkpoint.txt
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas       820 Jan  9 18:42 pilotlog.txt
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas   2252957 Jan  9 18:42 log.47898826._038723.job.log.1
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas       357 Jan  9 18:42 output.list
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas       620 Jan  9 18:42 runtime_log
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas   2775040 Jan  9 18:42 result.tar.gz
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 18:42 runtime_log.err
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas       663 Jan  9 18:42 DJ9NDmrCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6zgKDmafsZCo.diag
[2026-01-09 18:42:46] -rw-r--r-- 1 boincer umatlas     21068 Jan  9 18:42 stderr.txt
[2026-01-09 18:42:46] HITS file was successfully produced:
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas 217158311 Jan  9 18:41 shared/HITS.pool.root.1
[2026-01-09 18:42:46]  *** Contents of shared directory: ***
[2026-01-09 18:42:46] total 434972
[2026-01-09 18:42:46] -rw-r--r-- 2 boincer umatlas 224857037 Jan  9 14:10 ATLAS.root_0
[2026-01-09 18:42:46] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:10 start_atlas.sh
[2026-01-09 18:42:46] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 14:10 input.tar.gz
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas 217158311 Jan  9 18:41 HITS.pool.root.1
[2026-01-09 18:42:46] -rw------- 1 boincer umatlas   2775040 Jan  9 18:42 result.tar.gz
18:42:47 (25825): run_atlas exited; CPU time 124597.666064
18:42:47 (25825): called boinc_finish(0)

</stderr_txt>
]]>

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