Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:45:22 (1651917): wrapper (7.7.26015): starting
14:45:22 (1651917): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 14:45:22] Arguments: --nthreads 9
[2026-01-09 14:45:22] Threads: 9
[2026-01-09 14:45:22] Checking for CVMFS
[2026-01-09 14:45:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:45:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:45:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:45:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:45:23] 2.13.3.0 11754 93802 222256 154955 3 440 22799789 32935937 19722 16776704 0 487843525 99.518 638224511 17681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:45:23] CVMFS is ok
[2026-01-09 14:45:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:45:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:45:23] Further information can be found at the LHC@home message board.
[2026-01-09 14:45:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:45:23] Checking for apptainer binary...
[2026-01-09 14:45:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:45:23] Running /usr/bin/apptainer --version
[2026-01-09 14:45:23] apptainer version 1.4.5-2.el9
[2026-01-09 14:45:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:45:23] c7-2-38.aglt2.org
[2026-01-09 14:45:23] apptainer works
[2026-01-09 14:45:23] Set ATHENA_PROC_NUMBER=9
[2026-01-09 14:45:23] Set ATHENA_CORE_NUMBER=9
[2026-01-09 14:45:24] Starting ATLAS job with PandaID=6963190184
[2026-01-09 14:45:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:35:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:35:54] 2026-01-09 22:35:15,419 | INFO     | monitor loop #648: job 0:6963190184 is in state 'finished'
[2026-01-09 17:35:54] 2026-01-09 22:35:15,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:35:54] 2026-01-09 22:35:17,390 | INFO     | time since job start (10149s) is within the limit (349056.0s)
[2026-01-09 17:35:54] 2026-01-09 22:35:17,924 | INFO     | monitor loop #649: job 0:6963190184 is in state 'finished'
[2026-01-09 17:35:54] 2026-01-09 22:35:17,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:35:54] 2026-01-09 22:35:19,396 | INFO     | time since job start (10151s) is within the limit (349056.0s)
[2026-01-09 17:35:54] 2026-01-09 22:35:20,444 | INFO     | monitor loop #650: job 0:6963190184 is in state 'finished'
[2026-01-09 17:35:54] 2026-01-09 22:35:20,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:35:54] 2026-01-09 22:35:20,480 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:35:54] 2026-01-09 22:35:20,492 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3380.5724895833337
[2026-01-09 17:35:54] 2026-01-09 22:35:20,505 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963190184/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:35:54] 2026-01-09 22:35:20,506 | INFO     | extracted standard info from prmon json
[2026-01-09 17:35:54] 2026-01-09 22:35:20,506 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:35:54] 2026-01-09 22:35:20,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:35:54] 2026-01-09 22:35:20,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:35:54] 2026-01-09 22:35:20,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:35:54] 2026-01-09 22:35:20,513 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:35:54] 2026-01-09 22:35:20,514 | INFO     | sum of square deviations: 1392888434.1818206
[2026-01-09 17:35:54] 2026-01-09 22:35:20,514 | INFO     | sum of deviations: 14358617997.36364
[2026-01-09 17:35:54] 2026-01-09 22:35:20,515 | INFO     | mean x: 1767993057.3636363
[2026-01-09 17:35:54] 2026-01-09 22:35:20,515 | INFO     | mean y: 2557004.327272727
[2026-01-09 17:35:54] 2026-01-09 22:35:20,515 | INFO     | intersect: -18222834426.67209
[2026-01-09 17:35:54] 2026-01-09 22:35:20,515 | INFO     | chi2: 2.7018215414847435
[2026-01-09 17:35:54] 2026-01-09 22:35:20,515 | INFO     | sum of square deviations: 1270066702.2437532
[2026-01-09 17:35:54] 2026-01-09 22:35:20,516 | INFO     | sum of deviations: 14092224800.662516
[2026-01-09 17:35:54] 2026-01-09 22:35:20,517 | INFO     | mean x: 1767992904.86875
[2026-01-09 17:35:54] 2026-01-09 22:35:20,518 | INFO     | mean y: 2556673.4125
[2026-01-09 17:35:54] 2026-01-09 22:35:20,518 | INFO     | intersect: -19614486602.63825
[2026-01-09 17:35:54] 2026-01-09 22:35:20,518 | INFO     | chi2: 2.7053946064311574
[2026-01-09 17:35:54] 2026-01-09 22:35:20,518 | INFO     | current chi2=2.7053946064311574 (change=-0.1322465193038001 %)
[2026-01-09 17:35:54] 2026-01-09 22:35:20,518 | INFO     | right removable region: 159
[2026-01-09 17:35:54] 2026-01-09 22:35:20,518 | INFO     | sum of square deviations: 1270039923.5
[2026-01-09 17:35:54] 2026-01-09 22:35:20,519 | INFO     | sum of deviations: -24149964716.37502
[2026-01-09 17:35:54] 2026-01-09 22:35:20,519 | INFO     | mean x: 1767993209.875
[2026-01-09 17:35:54] 2026-01-09 22:35:20,519 | INFO     | mean y: 2604425.43125
[2026-01-09 17:35:54] 2026-01-09 22:35:20,519 | INFO     | intersect: 33621211878.027493
[2026-01-09 17:35:54] 2026-01-09 22:35:20,519 | INFO     | chi2: 0.2847662670595933
[2026-01-09 17:35:54] 2026-01-09 22:35:20,520 | INFO     | current chi2=0.2847662670595933 (change=89.46021183534185 %)
[2026-01-09 17:35:54] 2026-01-09 22:35:20,520 | INFO     | sum of square deviations: 1154633412.774199
[2026-01-09 17:35:54] 2026-01-09 22:35:20,520 | INFO     | sum of deviations: -26742574254.870953
[2026-01-09 17:35:54] 2026-01-09 22:35:20,521 | INFO     | mean x: 1767993362.387097
[2026-01-09 17:35:54] 2026-01-09 22:35:20,521 | INFO     | mean y: 2607806.064516129
[2026-01-09 17:35:54] 2026-01-09 22:35:20,521 | INFO     | intersect: 40951270171.68597
[2026-01-09 17:35:54] 2026-01-09 22:35:20,521 | INFO     | chi2: 0.24653570274499134
[2026-01-09 17:35:54] 2026-01-09 22:35:20,521 | INFO     | current chi2=0.24653570274499134 (change=13.425243344079588 %)
[2026-01-09 17:35:54] 2026-01-09 22:35:20,521 | INFO     | left removable region: 20
[2026-01-09 17:35:54] 2026-01-09 22:35:20,521 | INFO     | sum of square deviations: 832678825.4388492
[2026-01-09 17:35:54] 2026-01-09 22:35:20,522 | INFO     | sum of deviations: -12539997944.280571
[2026-01-09 17:35:54] 2026-01-09 22:35:20,522 | INFO     | mean x: 1767993484.4028778
[2026-01-09 17:35:54] 2026-01-09 22:35:20,522 | INFO     | mean y: 2588642.201438849
[2026-01-09 17:35:54] 2026-01-09 22:35:20,522 | INFO     | intersect: 26628262290.416134
[2026-01-09 17:35:54] 2026-01-09 22:35:20,522 | INFO     | chi2: 0.18240527516459207
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | current memory leak: -15.06 B/s (using 139 data points, chi2=0.18)
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | could have reported an average CPU frequency of 3287 MHz (9 samples)
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | ..............................
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | . Timing measurements:
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | . get job = 0 s
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | . initial setup = 5 s
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | . payload setup = 30 s
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | . stage-in = 0 s
[2026-01-09 17:35:54] 2026-01-09 22:35:20,523 | INFO     | . payload execution = 10068 s
[2026-01-09 17:35:54] 2026-01-09 22:35:20,524 | INFO     | . stage-out = 0 s
[2026-01-09 17:35:54] 2026-01-09 22:35:20,524 | INFO     | . log creation = 0 s
[2026-01-09 17:35:54] 2026-01-09 22:35:20,524 | INFO     | ..............................
[2026-01-09 17:35:54] 2026-01-09 22:35:21,002 | INFO     | 
[2026-01-09 17:35:54] 2026-01-09 22:35:21,002 | INFO     | job summary report
[2026-01-09 17:35:54] 2026-01-09 22:35:21,002 | INFO     | --------------------------------------------------
[2026-01-09 17:35:54] 2026-01-09 22:35:21,002 | INFO     | PanDA job id: 6963190184
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | task id: 47898826
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | errors: (none)
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | pilot state: finished 
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | transexitcode: 0
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | exeerrorcode: 0
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | exeerrordiag: 
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | exitcode: 0
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | exitmsg: OK
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | cpuconsumptiontime: 44184 s
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | nevents: 400
[2026-01-09 17:35:54] 2026-01-09 22:35:21,003 | INFO     | neventsw: 0
[2026-01-09 17:35:54] 2026-01-09 22:35:21,004 | INFO     | pid: 1672344
[2026-01-09 17:35:54] 2026-01-09 22:35:21,004 | INFO     | pgrp: 1672344
[2026-01-09 17:35:54] 2026-01-09 22:35:21,004 | INFO     | corecount: 9
[2026-01-09 17:35:54] 2026-01-09 22:35:21,004 | INFO     | event service: False
[2026-01-09 17:35:54] 2026-01-09 22:35:21,004 | INFO     | sizes: {0: 2283971, 1: 2283971, 12: 2283999, 15: 2284289, 22: 2284317, 10102: 2312936, 10103: 2313063, 10104: 2322173, 10114: 2322375}
[2026-01-09 17:35:54] 2026-01-09 22:35:21,004 | INFO     | --------------------------------------------------
[2026-01-09 17:35:54] 2026-01-09 22:35:21,004 | INFO     | 
[2026-01-09 17:35:54] 2026-01-09 22:35:21,004 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 17:35:54] 2026-01-09 22:35:21,026 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | job 6963190184 has completed (purged errors)
[2026-01-09 17:35:54] 2026-01-09 22:35:21,028 | INFO     | overall cleanup function is called
[2026-01-09 17:35:54] 2026-01-09 22:35:22,046 | INFO     | --- collectZombieJob: --- 10, [1672344]
[2026-01-09 17:35:54] 2026-01-09 22:35:22,046 | INFO     | zombie collector waiting for pid 1672344
[2026-01-09 17:35:54] 2026-01-09 22:35:22,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:35:54] 2026-01-09 22:35:22,047 | INFO     | collected zombie processes
[2026-01-09 17:35:54] 2026-01-09 22:35:22,047 | INFO     | will attempt to kill all subprocesses of pid=1672344
[2026-01-09 17:35:54] 2026-01-09 22:35:23,047 | INFO     | process IDs to be killed: [1672344] (in reverse order)
[2026-01-09 17:35:54] 2026-01-09 22:35:23,283 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:35:54] 2026-01-09 22:35:23,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:35:54] 2026-01-09 22:35:23,304 | INFO     | did not find any defunct processes belonging to 1672344
[2026-01-09 17:35:54] 2026-01-09 22:35:23,315 | INFO     | did not find any defunct processes belonging to 1672344
[2026-01-09 17:35:54] 2026-01-09 22:35:23,316 | INFO     | ready for new job
[2026-01-09 17:35:54] 2026-01-09 22:35:23,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:35:54] 2026-01-09 22:35:23,319 | INFO     | ***************************************
[2026-01-09 17:35:54] 2026-01-09 22:35:23,320 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:35:54] 2026-01-09 22:35:23,320 | INFO     | ***************************************
[2026-01-09 17:35:54] 2026-01-09 22:35:23,320 | INFO     | 
[2026-01-09 17:35:54] 2026-01-09 22:35:23,327 | INFO     | architecture information:
[2026-01-09 17:35:54] 2026-01-09 22:35:23,328 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:35:54] 2026-01-09 22:35:23,349 | INFO     | cat /etc/os-release:
[2026-01-09 17:35:54] NAME="CentOS Linux"
[2026-01-09 17:35:54] VERSION="7 (Core)"
[2026-01-09 17:35:54] ID="centos"
[2026-01-09 17:35:54] ID_LIKE="rhel fedora"
[2026-01-09 17:35:54] VERSION_ID="7"
[2026-01-09 17:35:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:35:54] ANSI_COLOR="0;31"
[2026-01-09 17:35:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:35:54] HOME_URL="https://www.centos.org/"
[2026-01-09 17:35:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:35:54] 
[2026-01-09 17:35:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:35:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:35:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:35:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:35:54] 
[2026-01-09 17:35:54] 2026-01-09 22:35:23,350 | INFO     | ***************************************
[2026-01-09 17:35:54] 2026-01-09 22:35:23,852 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 17:35:54] 2026-01-09 22:35:23,901 | INFO     | sufficient remaining disk space (72406269952 B)
[2026-01-09 17:35:54] 2026-01-09 22:35:23,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:35:54] 2026-01-09 22:35:23,903 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:35:54] 2026-01-09 22:35:23,903 | INFO     | update_server=False
[2026-01-09 17:35:54] 2026-01-09 22:35:23,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:35:54] 2026-01-09 22:35:23,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:35:54] 2026-01-09 22:35:23,956 | INFO     | aborting loop
[2026-01-09 17:35:54] 2026-01-09 22:35:24,266 | INFO     | all data control threads have been joined
[2026-01-09 17:35:54] 2026-01-09 22:35:24,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:35:54] 2026-01-09 22:35:24,773 | INFO     | all job control threads have been joined
[2026-01-09 17:35:54] 2026-01-09 22:35:24,909 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:24,961 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:25,083 | INFO     | all payload control threads have been joined
[2026-01-09 17:35:54] 2026-01-09 22:35:25,139 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:25,272 | INFO     | [data] control thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:25,283 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:25,343 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:25,520 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:35:54] 2026-01-09 22:35:25,577 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:25,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:35:54] 2026-01-09 22:35:25,678 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:25,719 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:25,779 | INFO     | [job] control thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:26,089 | INFO     | [payload] control thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:26,166 | INFO     | [job] validate thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:26,281 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:26,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:35:54] 2026-01-09 22:35:26,667 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:30,413 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:34,818 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:35:54] 2026-01-09 22:35:35,824 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:35:54] 2026-01-09 22:35:37,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895437809472)>', '<ExcThread(monitor, started 139895095928576)>']
[2026-01-09 17:35:54] 2026-01-09 22:35:42,068 | INFO     | all workflow threads have been joined
[2026-01-09 17:35:54] 2026-01-09 22:35:42,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:35:54] 2026-01-09 22:35:42,073 | INFO     | traces error code: 0
[2026-01-09 17:35:54] 2026-01-09 22:35:42,073 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:35:54] 2026-01-09 22:35:53,317 | INFO     | PID=1660681 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:35:54] 2026-01-09 22:35:53,317 | INFO     | .. there are 27 such processes running
[2026-01-09 17:35:54] 2026-01-09 22:35:53,317 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:35:54] 2026-01-09 22:35:53,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:35:54] 2026-01-09 22:35:53,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:35:54] 2026-01-09 22:35:53,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:35:54] 2026-01-09 22:35:53,318 | INFO     | [monitor] control thread has ended
[2026-01-09 17:35:54] 2026-01-09 22:35:53,511 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:35:54] 2026-01-09 22:35:53,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:35:54] 2026-01-09 22:35:53,549 [wrapper] pilotpid: 1660681
[2026-01-09 17:35:54] 2026-01-09 22:35:53,569 [wrapper] Pilot exit status: 0
[2026-01-09 17:35:54] 2026-01-09 22:35:53,648 [wrapper] pandaids: 6963190184
[2026-01-09 17:35:54] 2026-01-09 22:35:53,777 [wrapper] cleanup supervisor_pilot 2565377 1660682
[2026-01-09 17:35:54] 2026-01-09 22:35:53,794 [wrapper] Test setup, not cleaning
[2026-01-09 17:35:54] 2026-01-09 22:35:53,836 [wrapper] apfmon messages muted
[2026-01-09 17:35:54] 2026-01-09 22:35:53,858 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:35:54] 2026-01-09 22:35:53,894 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:35:54]  *** Error codes and diagnostics ***
[2026-01-09 17:35:54]     "exeErrorCode": 0,
[2026-01-09 17:35:54]     "exeErrorDiag": "",
[2026-01-09 17:35:54]     "pilotErrorCode": 0,
[2026-01-09 17:35:54]     "pilotErrorDiag": "",
[2026-01-09 17:35:54]  *** Listing of results directory ***
[2026-01-09 17:35:54] total 442504
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 17:35:54] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:35:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:45 run_atlas
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:45 job.xml
[2026-01-09 17:35:54] -rw-r--r--. 2 boincer umatlas 228156993 Jan  9 14:45 EVNT.47898824._001489.pool.root.1
[2026-01-09 17:35:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:45 start_atlas.sh
[2026-01-09 17:35:54] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:45 shared
[2026-01-09 17:35:54] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 14:45 input.tar.gz
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:45 boinc_lockfile
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 14:45 pandaJob.out
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas        57 Jan  9 14:45 setup.sh.local
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas    989364 Jan  9 14:46 agis_schedconf.cvmfs.json
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:35:54] drwx------. 5 boincer umatlas      4096 Jan  9 14:46 pilot3
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas      6943 Jan  9 17:31 init_data.xml
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas 217549386 Jan  9 17:34 HITS.47898826._038769.pool.root.1
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas       530 Jan  9 17:34 boinc_task_state.xml
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas      1035 Jan  9 17:35 memory_monitor_summary.json
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas        95 Jan  9 17:35 pilot_heartbeat.json
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas    423727 Jan  9 17:35 log.47898826._038769.job.log.tgz.1
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas      7772 Jan  9 17:35 heartbeat.json
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 17:35 boinc_mmap_file
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas        27 Jan  9 17:35 wrapper_checkpoint.txt
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas       823 Jan  9 17:35 pilotlog.txt
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas   1328784 Jan  9 17:35 log.47898826._038769.job.log.1
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas       357 Jan  9 17:35 output.list
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas       620 Jan  9 17:35 runtime_log
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas   1771520 Jan  9 17:35 result.tar.gz
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 17:35 runtime_log.err
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas       654 Jan  9 17:35 P1aLDmrCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqCmKDmz2Amzn.diag
[2026-01-09 17:35:54] -rw-r--r--. 1 boincer umatlas     21386 Jan  9 17:35 stderr.txt
[2026-01-09 17:35:54] HITS file was successfully produced:
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas 217549386 Jan  9 17:34 shared/HITS.pool.root.1
[2026-01-09 17:35:54]  *** Contents of shared directory: ***
[2026-01-09 17:35:54] total 437596
[2026-01-09 17:35:54] -rw-r--r--. 2 boincer umatlas 228156993 Jan  9 14:45 ATLAS.root_0
[2026-01-09 17:35:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:45 start_atlas.sh
[2026-01-09 17:35:54] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 14:45 input.tar.gz
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas 217549386 Jan  9 17:34 HITS.pool.root.1
[2026-01-09 17:35:54] -rw-------. 1 boincer umatlas   1771520 Jan  9 17:35 result.tar.gz
17:35:55 (1651917): run_atlas exited; CPU time 44500.347106
17:35:55 (1651917): called boinc_finish(0)

</stderr_txt>
]]>

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