Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:24:03 (23219): wrapper (7.7.26015): starting
14:24:03 (23219): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:24:03] Arguments: --nthreads 8
[2026-01-09 14:24:03] Threads: 8
[2026-01-09 14:24:03] Checking for CVMFS
[2026-01-09 14:24:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:24:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:24:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:24:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:24:03] 2.11.2.0 28705 181618 140036 154955 3 227 11105514 18432000 1815 130560 0 122363115 99.980 7099041 33944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:24:03] CVMFS is ok
[2026-01-09 14:24:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:24:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:24:03] Further information can be found at the LHC@home message board.
[2026-01-09 14:24:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:24:03] Checking for apptainer binary...
[2026-01-09 14:24:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:24:03] Running /usr/bin/apptainer --version
[2026-01-09 14:24:03] apptainer version 1.3.2-1.el7
[2026-01-09 14:24:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:24:04] c-206-27.aglt2.org
[2026-01-09 14:24:04] apptainer works
[2026-01-09 14:24:04] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:24:04] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:24:04] Starting ATLAS job with PandaID=6963189465
[2026-01-09 14:24:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:55:47]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:55:47] 2026-01-09 23:54:44,139 | INFO     | time since job start (16230s) is within the limit (349056.0s)
[2026-01-09 18:55:47] 2026-01-09 23:54:44,244 | INFO     | monitor loop #1162: job 0:6963189465 is in state 'finished'
[2026-01-09 18:55:47] 2026-01-09 23:54:44,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,143 | INFO     | time since job start (16232s) is within the limit (349056.0s)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,747 | INFO     | monitor loop #1163: job 0:6963189465 is in state 'finished'
[2026-01-09 18:55:47] 2026-01-09 23:54:46,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,953 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:55:47] 2026-01-09 23:54:46,959 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2156.1666666666665
[2026-01-09 18:55:47] 2026-01-09 23:54:46,964 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963189465/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,965 | INFO     | extracted standard info from prmon json
[2026-01-09 18:55:47] 2026-01-09 23:54:46,965 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:55:47] 2026-01-09 23:54:46,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:55:47] 2026-01-09 23:54:46,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:55:47] 2026-01-09 23:54:46,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:55:47] 2026-01-09 23:54:46,973 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:55:47] 2026-01-09 23:54:46,974 | INFO     | sum of square deviations: 5836025702.5
[2026-01-09 18:55:47] 2026-01-09 23:54:46,977 | INFO     | sum of deviations: 12525812894.999996
[2026-01-09 18:55:47] 2026-01-09 23:54:46,977 | INFO     | mean x: 1767994760.5
[2026-01-09 18:55:47] 2026-01-09 23:54:46,977 | INFO     | mean y: 2503986.3533834587
[2026-01-09 18:55:47] 2026-01-09 23:54:46,977 | INFO     | intersect: -3792128302.5134645
[2026-01-09 18:55:47] 2026-01-09 23:54:46,978 | INFO     | chi2: 1.3312301586764588
[2026-01-09 18:55:47] 2026-01-09 23:54:46,978 | INFO     | sum of square deviations: 5513070810.0
[2026-01-09 18:55:47] 2026-01-09 23:54:46,981 | INFO     | sum of deviations: 12030321301.999994
[2026-01-09 18:55:47] 2026-01-09 23:54:46,981 | INFO     | mean x: 1767994608.0
[2026-01-09 18:55:47] 2026-01-09 23:54:46,981 | INFO     | mean y: 2503751.7394636017
[2026-01-09 18:55:47] 2026-01-09 23:54:46,982 | INFO     | intersect: -3855517290.8822484
[2026-01-09 18:55:47] 2026-01-09 23:54:46,982 | INFO     | chi2: 1.3313974246374756
[2026-01-09 18:55:47] 2026-01-09 23:54:46,982 | INFO     | current chi2=1.3313974246374756 (change=-0.012564766500113966 %)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,982 | INFO     | right removable region: 260
[2026-01-09 18:55:47] 2026-01-09 23:54:46,983 | INFO     | sum of square deviations: 5513070810.0
[2026-01-09 18:55:47] 2026-01-09 23:54:46,986 | INFO     | sum of deviations: -24587724084.0
[2026-01-09 18:55:47] 2026-01-09 23:54:46,986 | INFO     | mean x: 1767994913.0
[2026-01-09 18:55:47] 2026-01-09 23:54:46,986 | INFO     | mean y: 2521365.0153256706
[2026-01-09 18:55:47] 2026-01-09 23:54:46,986 | INFO     | intersect: 7887595328.496593
[2026-01-09 18:55:47] 2026-01-09 23:54:46,987 | INFO     | chi2: 0.07386223420464333
[2026-01-09 18:55:47] 2026-01-09 23:54:46,987 | INFO     | current chi2=0.07386223420464333 (change=94.45158046313502 %)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,987 | INFO     | sum of square deviations: 5202255680.0
[2026-01-09 18:55:47] 2026-01-09 23:54:46,990 | INFO     | sum of deviations: -25673566662.0
[2026-01-09 18:55:47] 2026-01-09 23:54:46,990 | INFO     | mean x: 1767995065.5
[2026-01-09 18:55:47] 2026-01-09 23:54:46,990 | INFO     | mean y: 2521878.671875
[2026-01-09 18:55:47] 2026-01-09 23:54:46,990 | INFO     | intersect: 8727725321.998465
[2026-01-09 18:55:47] 2026-01-09 23:54:46,991 | INFO     | chi2: 0.06039224665374714
[2026-01-09 18:55:47] 2026-01-09 23:54:46,991 | INFO     | current chi2=0.06039224665374714 (change=18.236637025595684 %)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,991 | INFO     | left removable region: 20
[2026-01-09 18:55:47] 2026-01-09 23:54:46,991 | INFO     | sum of square deviations: 4286517580.0
[2026-01-09 18:55:47] 2026-01-09 23:54:46,993 | INFO     | sum of deviations: -20128984807.500008
[2026-01-09 18:55:47] 2026-01-09 23:54:46,993 | INFO     | mean x: 1767995187.5
[2026-01-09 18:55:47] 2026-01-09 23:54:46,993 | INFO     | mean y: 2519106.1625
[2026-01-09 18:55:47] 2026-01-09 23:54:46,993 | INFO     | intersect: 8304817558.166195
[2026-01-09 18:55:47] 2026-01-09 23:54:46,993 | INFO     | chi2: 0.057422291536768214
[2026-01-09 18:55:47] 2026-01-09 23:54:46,993 | INFO     | current memory leak: -4.70 B/s (using 240 data points, chi2=0.06)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,994 | INFO     | could have reported an average CPU frequency of 2492 MHz (12 samples)
[2026-01-09 18:55:47] 2026-01-09 23:54:46,994 | INFO     | ..............................
[2026-01-09 18:55:47] 2026-01-09 23:54:46,994 | INFO     | . Timing measurements:
[2026-01-09 18:55:47] 2026-01-09 23:54:46,994 | INFO     | . get job = 0 s
[2026-01-09 18:55:47] 2026-01-09 23:54:46,994 | INFO     | . initial setup = 2 s
[2026-01-09 18:55:47] 2026-01-09 23:54:46,994 | INFO     | . payload setup = 4 s
[2026-01-09 18:55:47] 2026-01-09 23:54:46,995 | INFO     | . stage-in = 0 s
[2026-01-09 18:55:47] 2026-01-09 23:54:46,995 | INFO     | . payload execution = 16202 s
[2026-01-09 18:55:47] 2026-01-09 23:54:46,995 | INFO     | . stage-out = 1 s
[2026-01-09 18:55:47] 2026-01-09 23:54:46,995 | INFO     | . log creation = 0 s
[2026-01-09 18:55:47] 2026-01-09 23:54:46,995 | INFO     | ..............................
[2026-01-09 18:55:47] 2026-01-09 23:54:47,147 | INFO     | 
[2026-01-09 18:55:47] 2026-01-09 23:54:47,148 | INFO     | job summary report
[2026-01-09 18:55:47] 2026-01-09 23:54:47,148 | INFO     | --------------------------------------------------
[2026-01-09 18:55:47] 2026-01-09 23:54:47,148 | INFO     | PanDA job id: 6963189465
[2026-01-09 18:55:47] 2026-01-09 23:54:47,148 | INFO     | task id: 47898826
[2026-01-09 18:55:47] 2026-01-09 23:54:47,148 | INFO     | errors: (none)
[2026-01-09 18:55:47] 2026-01-09 23:54:47,149 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:55:47] 2026-01-09 23:54:47,149 | INFO     | pilot state: finished 
[2026-01-09 18:55:47] 2026-01-09 23:54:47,149 | INFO     | transexitcode: 0
[2026-01-09 18:55:47] 2026-01-09 23:54:47,149 | INFO     | exeerrorcode: 0
[2026-01-09 18:55:47] 2026-01-09 23:54:47,149 | INFO     | exeerrordiag: 
[2026-01-09 18:55:47] 2026-01-09 23:54:47,149 | INFO     | exitcode: 0
[2026-01-09 18:55:47] 2026-01-09 23:54:47,150 | INFO     | exitmsg: OK
[2026-01-09 18:55:47] 2026-01-09 23:54:47,150 | INFO     | cpuconsumptiontime: 124762 s
[2026-01-09 18:55:47] 2026-01-09 23:54:47,150 | INFO     | nevents: 400
[2026-01-09 18:55:47] 2026-01-09 23:54:47,150 | INFO     | neventsw: 0
[2026-01-09 18:55:47] 2026-01-09 23:54:47,150 | INFO     | pid: 1261
[2026-01-09 18:55:47] 2026-01-09 23:54:47,150 | INFO     | pgrp: 1261
[2026-01-09 18:55:47] 2026-01-09 23:54:47,150 | INFO     | corecount: 8
[2026-01-09 18:55:47] 2026-01-09 23:54:47,151 | INFO     | event service: False
[2026-01-09 18:55:47] 2026-01-09 23:54:47,151 | INFO     | sizes: {0: 2283800, 1: 2283999, 4: 2284261, 11: 2284289, 16210: 2315721, 16213: 2324719, 16214: 2324903, 16217: 2325097}
[2026-01-09 18:55:47] 2026-01-09 23:54:47,151 | INFO     | --------------------------------------------------
[2026-01-09 18:55:47] 2026-01-09 23:54:47,151 | INFO     | 
[2026-01-09 18:55:47] 2026-01-09 23:54:47,151 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 18:55:47] 2026-01-09 23:54:47,165 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,166 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,166 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,166 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,168 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:55:47] 2026-01-09 23:54:47,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,169 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:55:47] 2026-01-09 23:54:47,169 | INFO     | job 6963189465 has completed (purged errors)
[2026-01-09 18:55:47] 2026-01-09 23:54:47,169 | INFO     | overall cleanup function is called
[2026-01-09 18:55:47] 2026-01-09 23:54:48,177 | INFO     | --- collectZombieJob: --- 10, [1261]
[2026-01-09 18:55:47] 2026-01-09 23:54:48,178 | INFO     | zombie collector waiting for pid 1261
[2026-01-09 18:55:47] 2026-01-09 23:54:48,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:55:47] 2026-01-09 23:54:48,178 | INFO     | collected zombie processes
[2026-01-09 18:55:47] 2026-01-09 23:54:48,178 | INFO     | will attempt to kill all subprocesses of pid=1261
[2026-01-09 18:55:47] 2026-01-09 23:54:48,333 | INFO     | process IDs to be killed: [1261] (in reverse order)
[2026-01-09 18:55:47] 2026-01-09 23:54:48,544 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:55:47] 2026-01-09 23:54:48,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:55:47] 2026-01-09 23:54:48,547 | INFO     | did not find any defunct processes belonging to 1261
[2026-01-09 18:55:47] 2026-01-09 23:54:48,549 | INFO     | did not find any defunct processes belonging to 1261
[2026-01-09 18:55:47] 2026-01-09 23:54:48,549 | INFO     | ready for new job
[2026-01-09 18:55:47] 2026-01-09 23:54:48,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:55:47] 2026-01-09 23:54:48,551 | INFO     | ***************************************
[2026-01-09 18:55:47] 2026-01-09 23:54:48,551 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:55:47] 2026-01-09 23:54:48,551 | INFO     | ***************************************
[2026-01-09 18:55:47] 2026-01-09 23:54:48,551 | INFO     | 
[2026-01-09 18:55:47] 2026-01-09 23:54:48,552 | INFO     | architecture information:
[2026-01-09 18:55:47] 2026-01-09 23:54:48,553 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:55:47] 2026-01-09 23:54:48,564 | INFO     | cat /etc/os-release:
[2026-01-09 18:55:47] NAME="CentOS Linux"
[2026-01-09 18:55:47] VERSION="7 (Core)"
[2026-01-09 18:55:47] ID="centos"
[2026-01-09 18:55:47] ID_LIKE="rhel fedora"
[2026-01-09 18:55:47] VERSION_ID="7"
[2026-01-09 18:55:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:55:47] ANSI_COLOR="0;31"
[2026-01-09 18:55:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:55:47] HOME_URL="https://www.centos.org/"
[2026-01-09 18:55:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:55:47] 
[2026-01-09 18:55:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:55:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:55:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:55:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:55:47] 
[2026-01-09 18:55:47] 2026-01-09 23:54:48,564 | INFO     | ***************************************
[2026-01-09 18:55:47] 2026-01-09 23:54:49,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 18:55:47] 2026-01-09 23:54:49,080 | INFO     | sufficient remaining disk space (27665629184 B)
[2026-01-09 18:55:47] 2026-01-09 23:54:49,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:55:47] 2026-01-09 23:54:49,081 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:55:47] 2026-01-09 23:54:49,081 | INFO     | update_server=False
[2026-01-09 18:55:47] 2026-01-09 23:54:49,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:55:47] 2026-01-09 23:54:49,184 | INFO     | all payload control threads have been joined
[2026-01-09 18:55:47] 2026-01-09 23:54:49,251 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:55:47] 2026-01-09 23:54:49,251 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:55:47] 2026-01-09 23:54:49,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:55:47] 2026-01-09 23:54:49,252 | INFO     | will abort loop
[2026-01-09 18:55:47] 2026-01-09 23:54:49,331 | INFO     | all data control threads have been joined
[2026-01-09 18:55:47] 2026-01-09 23:54:49,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:55:47] 2026-01-09 23:54:49,716 | INFO     | all job control threads have been joined
[2026-01-09 18:55:47] 2026-01-09 23:54:50,086 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,189 | INFO     | [payload] control thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,198 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,248 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,253 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,257 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,335 | INFO     | [data] control thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,432 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:55:47] 2026-01-09 23:54:50,654 | INFO     | [job] validate thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,721 | INFO     | [job] control thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:50,962 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:51,457 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:51,513 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:52,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:55:47] 2026-01-09 23:54:52,438 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:53,084 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:53,712 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:54:59,737 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:55:47] 2026-01-09 23:55:00,742 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:55:47] 2026-01-09 23:55:19,370 | INFO     | PID=27295 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 18:55:47] 2026-01-09 23:55:19,371 | INFO     | .. there are 3 such processes running
[2026-01-09 18:55:47] 2026-01-09 23:55:19,371 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:55:47] 2026-01-09 23:55:19,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:55:47] 2026-01-09 23:55:19,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:55:47] 2026-01-09 23:55:41,447 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:55:47] 2026-01-09 23:55:42,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268742469440)>', '<ExcThread(monitor, started 140268296713984)>']
[2026-01-09 18:55:47] 2026-01-09 23:55:42,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:55:47] 2026-01-09 23:55:42,481 | INFO     | [monitor] control thread has ended
[2026-01-09 18:55:47] 2026-01-09 23:55:47,404 | INFO     | all workflow threads have been joined
[2026-01-09 18:55:47] 2026-01-09 23:55:47,404 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:55:47] 2026-01-09 23:55:47,404 | INFO     | traces error code: 0
[2026-01-09 18:55:47] 2026-01-09 23:55:47,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:55:47] 2026-01-09 23:55:47,477 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:55:47] 2026-01-09 23:55:47,479 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:55:47] 2026-01-09 23:55:47,481 [wrapper] pilotpid: 27295
[2026-01-09 18:55:47] 2026-01-09 23:55:47,483 [wrapper] Pilot exit status: 0
[2026-01-09 18:55:47] 2026-01-09 23:55:47,493 [wrapper] pandaids: 6963189465
[2026-01-09 18:55:47] 2026-01-09 23:55:47,523 [wrapper] cleanup supervisor_pilot 27248 27296
[2026-01-09 18:55:47] 2026-01-09 23:55:47,525 [wrapper] Test setup, not cleaning
[2026-01-09 18:55:47] 2026-01-09 23:55:47,527 [wrapper] apfmon messages muted
[2026-01-09 18:55:47] 2026-01-09 23:55:47,529 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:55:47] 2026-01-09 23:55:47,531 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:55:47]  *** Error codes and diagnostics ***
[2026-01-09 18:55:47]     "exeErrorCode": 0,
[2026-01-09 18:55:47]     "exeErrorDiag": "",
[2026-01-09 18:55:47]     "pilotErrorCode": 0,
[2026-01-09 18:55:47]     "pilotErrorDiag": "",
[2026-01-09 18:55:47]  *** Listing of results directory ***
[2026-01-09 18:55:47] total 446440
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 18:55:47] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas       100 Jan  9 14:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:55:47] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 14:24 run_atlas
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas       105 Jan  9 14:24 job.xml
[2026-01-09 18:55:47] -rw-r--r-- 2 boincer umatlas 226730526 Jan  9 14:24 EVNT.47898824._001472.pool.root.1
[2026-01-09 18:55:47] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:24 start_atlas.sh
[2026-01-09 18:55:47] drwxrwx--x 2 boincer umatlas      4096 Jan  9 14:24 shared
[2026-01-09 18:55:47] -rw-r--r-- 2 boincer umatlas    592395 Jan  9 14:24 input.tar.gz
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas         0 Jan  9 14:24 boinc_lockfile
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 14:24 pandaJob.out
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas        57 Jan  9 14:24 setup.sh.local
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas    989364 Jan  9 14:24 agis_schedconf.cvmfs.json
[2026-01-09 18:55:47] drwx------ 5 boincer umatlas      4096 Jan  9 14:24 pilot3
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 18:45 init_data.xml
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas 221034861 Jan  9 18:54 HITS.47898826._038334.pool.root.1
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas       531 Jan  9 18:54 boinc_task_state.xml
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas      1065 Jan  9 18:54 memory_monitor_summary.json
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas   1516240 Jan  9 18:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas    487542 Jan  9 18:54 log.47898826._038334.job.log.tgz.1
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas      7856 Jan  9 18:54 heartbeat.json
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas        95 Jan  9 18:55 pilot_heartbeat.json
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas        29 Jan  9 18:55 wrapper_checkpoint.txt
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 18:55 boinc_mmap_file
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas      5079 Jan  9 18:55 pilotlog.txt
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas   2246733 Jan  9 18:55 log.47898826._038334.job.log.1
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas       357 Jan  9 18:55 output.list
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas       620 Jan  9 18:55 runtime_log
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas   2754560 Jan  9 18:55 result.tar.gz
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 18:55 runtime_log.err
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas       662 Jan  9 18:55 0tJLDmeCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeCmKDmho5ecm.diag
[2026-01-09 18:55:47] -rw-r--r-- 1 boincer umatlas     21264 Jan  9 18:55 stderr.txt
[2026-01-09 18:55:47] HITS file was successfully produced:
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas 221034861 Jan  9 18:54 shared/HITS.pool.root.1
[2026-01-09 18:55:47]  *** Contents of shared directory: ***
[2026-01-09 18:55:47] total 440568
[2026-01-09 18:55:47] -rw-r--r-- 2 boincer umatlas 226730526 Jan  9 14:24 ATLAS.root_0
[2026-01-09 18:55:47] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:24 start_atlas.sh
[2026-01-09 18:55:47] -rw-r--r-- 2 boincer umatlas    592395 Jan  9 14:24 input.tar.gz
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas 221034861 Jan  9 18:54 HITS.pool.root.1
[2026-01-09 18:55:47] -rw------- 1 boincer umatlas   2754560 Jan  9 18:55 result.tar.gz
18:55:49 (23219): run_atlas exited; CPU time 124989.003248
18:55:49 (23219): called boinc_finish(0)

</stderr_txt>
]]>

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