Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:47:30 (1297128): wrapper (7.7.26015): starting
14:47:30 (1297128): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 14:47:30] Arguments: --nthreads 9
[2026-01-09 14:47:30] Threads: 9
[2026-01-09 14:47:30] Checking for CVMFS
[2026-01-09 14:47:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:47:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:47:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:47:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:47:30] 2.13.3.0 12500 93850 201676 154955 2 187 31027971 32503809 14638 16776704 0 501039634 99.477 670669630 35382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:47:30] CVMFS is ok
[2026-01-09 14:47:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:47:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:47:30] Further information can be found at the LHC@home message board.
[2026-01-09 14:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:47:30] Checking for apptainer binary...
[2026-01-09 14:47:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:47:30] Running /usr/bin/apptainer --version
[2026-01-09 14:47:30] apptainer version 1.4.5-2.el9
[2026-01-09 14:47:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:47:30] c7-7-36.aglt2.org
[2026-01-09 14:47:30] apptainer works
[2026-01-09 14:47:31] Set ATHENA_PROC_NUMBER=9
[2026-01-09 14:47:31] Set ATHENA_CORE_NUMBER=9
[2026-01-09 14:47:31] Starting ATLAS job with PandaID=6963189985
[2026-01-09 14:47:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:41:04]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:41:04] 2026-01-09 22:40:16,643 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:41:04] 2026-01-09 22:40:16,648 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3192.5096666666664
[2026-01-09 17:41:04] 2026-01-09 22:40:16,661 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963189985/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,662 | INFO     | extracted standard info from prmon json
[2026-01-09 17:41:04] 2026-01-09 22:40:16,662 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:41:04] 2026-01-09 22:40:16,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:41:04] 2026-01-09 22:40:16,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:41:04] 2026-01-09 22:40:16,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:41:04] 2026-01-09 22:40:16,668 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:41:04] 2026-01-09 22:40:16,668 | INFO     | sum of square deviations: 1523370112.476472
[2026-01-09 17:41:04] 2026-01-09 22:40:16,669 | INFO     | sum of deviations: -23720206976.294117
[2026-01-09 17:41:04] 2026-01-09 22:40:16,669 | INFO     | mean x: 1767993241.5117648
[2026-01-09 17:41:04] 2026-01-09 22:40:16,669 | INFO     | mean y: 2586529.6470588236
[2026-01-09 17:41:04] 2026-01-09 22:40:16,669 | INFO     | intersect: 27531789891.24703
[2026-01-09 17:41:04] 2026-01-09 22:40:16,670 | INFO     | chi2: 2.0364924329081884
[2026-01-09 17:41:04] 2026-01-09 22:40:16,670 | INFO     | sum of square deviations: 1392865949.97575
[2026-01-09 17:41:04] 2026-01-09 22:40:16,671 | INFO     | sum of deviations: -12289060797.321213
[2026-01-09 17:41:04] 2026-01-09 22:40:16,671 | INFO     | mean x: 1767993089.0121212
[2026-01-09 17:41:04] 2026-01-09 22:40:16,671 | INFO     | mean y: 2599583.6606060606
[2026-01-09 17:41:04] 2026-01-09 22:40:16,671 | INFO     | intersect: 15601354482.143093
[2026-01-09 17:41:04] 2026-01-09 22:40:16,671 | INFO     | chi2: 1.3549477307263602
[2026-01-09 17:41:04] 2026-01-09 22:40:16,671 | INFO     | current chi2=1.3549477307263602 (change=33.46659634814142 %)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,672 | INFO     | sum of square deviations: 1270036349.975002
[2026-01-09 17:41:04] 2026-01-09 22:40:16,672 | INFO     | sum of deviations: -11975621219.362494
[2026-01-09 17:41:04] 2026-01-09 22:40:16,673 | INFO     | mean x: 1767992936.5125
[2026-01-09 17:41:04] 2026-01-09 22:40:16,673 | INFO     | mean y: 2599972.93125
[2026-01-09 17:41:04] 2026-01-09 22:40:16,673 | INFO     | intersect: 16673629685.268887
[2026-01-09 17:41:04] 2026-01-09 22:40:16,673 | INFO     | chi2: 1.3522868517002586
[2026-01-09 17:41:04] 2026-01-09 22:40:16,673 | INFO     | current chi2=1.3522868517002586 (change=0.19638241134771497 %)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,673 | INFO     | right removable region: 159
[2026-01-09 17:41:04] 2026-01-09 22:40:16,673 | INFO     | sum of square deviations: 1392864729.97575
[2026-01-09 17:41:04] 2026-01-09 22:40:16,674 | INFO     | sum of deviations: -40118534358.472725
[2026-01-09 17:41:04] 2026-01-09 22:40:16,674 | INFO     | mean x: 1767993394.0121212
[2026-01-09 17:41:04] 2026-01-09 22:40:16,674 | INFO     | mean y: 2605258.2363636363
[2026-01-09 17:41:04] 2026-01-09 22:40:16,674 | INFO     | intersect: 50925930543.71687
[2026-01-09 17:41:04] 2026-01-09 22:40:16,675 | INFO     | chi2: 0.9410110584521885
[2026-01-09 17:41:04] 2026-01-09 22:40:16,675 | INFO     | current chi2=0.9410110584521885 (change=53.79255806473148 %)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,675 | INFO     | sum of square deviations: 1270033909.975002
[2026-01-09 17:41:04] 2026-01-09 22:40:16,676 | INFO     | sum of deviations: -32694722940.57498
[2026-01-09 17:41:04] 2026-01-09 22:40:16,676 | INFO     | mean x: 1767993546.5125
[2026-01-09 17:41:04] 2026-01-09 22:40:16,676 | INFO     | mean y: 2596031.2875
[2026-01-09 17:41:04] 2026-01-09 22:40:16,676 | INFO     | intersect: 45516387993.80959
[2026-01-09 17:41:04] 2026-01-09 22:40:16,676 | INFO     | chi2: 0.9185686830838672
[2026-01-09 17:41:04] 2026-01-09 22:40:16,676 | INFO     | current chi2=0.9185686830838672 (change=2.3849215337846683 %)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,676 | INFO     | left removable region: 20
[2026-01-09 17:41:04] 2026-01-09 22:40:16,677 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 17:41:04] 2026-01-09 22:40:16,677 | INFO     | sum of deviations: -6199739635.999997
[2026-01-09 17:41:04] 2026-01-09 22:40:16,677 | INFO     | mean x: 1767993516.0
[2026-01-09 17:41:04] 2026-01-09 22:40:16,677 | INFO     | mean y: 2587666.870503597
[2026-01-09 17:41:04] 2026-01-09 22:40:16,678 | INFO     | intersect: 13165554072.448856
[2026-01-09 17:41:04] 2026-01-09 22:40:16,678 | INFO     | chi2: 0.11078645112550155
[2026-01-09 17:41:04] 2026-01-09 22:40:16,678 | INFO     | current memory leak: -7.45 B/s (using 139 data points, chi2=0.11)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,678 | INFO     | could have reported an average CPU frequency of 3168 MHz (9 samples)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,678 | INFO     | ..............................
[2026-01-09 17:41:04] 2026-01-09 22:40:16,678 | INFO     | . Timing measurements:
[2026-01-09 17:41:04] 2026-01-09 22:40:16,679 | INFO     | . get job = 0 s
[2026-01-09 17:41:04] 2026-01-09 22:40:16,679 | INFO     | . initial setup = 2 s
[2026-01-09 17:41:04] 2026-01-09 22:40:16,679 | INFO     | . payload setup = 5 s
[2026-01-09 17:41:04] 2026-01-09 22:40:16,679 | INFO     | . stage-in = 0 s
[2026-01-09 17:41:04] 2026-01-09 22:40:16,679 | INFO     | . payload execution = 10321 s
[2026-01-09 17:41:04] 2026-01-09 22:40:16,679 | INFO     | . stage-out = 0 s
[2026-01-09 17:41:04] 2026-01-09 22:40:16,679 | INFO     | . log creation = 0 s
[2026-01-09 17:41:04] 2026-01-09 22:40:16,679 | INFO     | ..............................
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | 
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | job summary report
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | --------------------------------------------------
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | PanDA job id: 6963189985
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | task id: 47898826
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | errors: (none)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | pilot state: finished 
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | transexitcode: 0
[2026-01-09 17:41:04] 2026-01-09 22:40:16,849 | INFO     | exeerrorcode: 0
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | exeerrordiag: 
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | exitcode: 0
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | exitmsg: OK
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | cpuconsumptiontime: 45892 s
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | nevents: 400
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | neventsw: 0
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | pid: 1309060
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | pgrp: 1309060
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | corecount: 9
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | event service: False
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 11: 2284317, 10331: 2313080, 10332: 2322261, 10336: 2322261, 10341: 2322519}
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | --------------------------------------------------
[2026-01-09 17:41:04] 2026-01-09 22:40:16,850 | INFO     | 
[2026-01-09 17:41:04] 2026-01-09 22:40:16,851 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 17:41:04] 2026-01-09 22:40:16,869 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,869 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,869 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,870 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,871 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,871 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 22:40:16,871 | INFO     | job 6963189985 has completed (purged errors)
[2026-01-09 17:41:04] 2026-01-09 22:40:16,871 | INFO     | overall cleanup function is called
[2026-01-09 17:41:04] 2026-01-09 22:40:17,536 | INFO     | PID=1301396 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 17:41:04] 2026-01-09 22:40:17,537 | INFO     | .. there are 16 such processes running
[2026-01-09 17:41:04] 2026-01-09 22:40:17,879 | INFO     | --- collectZombieJob: --- 10, [1309060]
[2026-01-09 17:41:04] 2026-01-09 22:40:17,879 | INFO     | zombie collector waiting for pid 1309060
[2026-01-09 17:41:04] 2026-01-09 22:40:17,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:41:04] 2026-01-09 22:40:17,880 | INFO     | collected zombie processes
[2026-01-09 17:41:04] 2026-01-09 22:40:17,880 | INFO     | will attempt to kill all subprocesses of pid=1309060
[2026-01-09 17:41:04] 2026-01-09 22:40:18,386 | INFO     | process IDs to be killed: [1309060] (in reverse order)
[2026-01-09 17:41:04] 2026-01-09 22:40:18,505 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:41:04] 2026-01-09 22:40:18,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:41:04] 2026-01-09 22:40:18,522 | INFO     | did not find any defunct processes belonging to 1309060
[2026-01-09 17:41:04] 2026-01-09 22:40:18,538 | INFO     | did not find any defunct processes belonging to 1309060
[2026-01-09 17:41:04] 2026-01-09 22:40:18,539 | INFO     | ready for new job
[2026-01-09 17:41:04] 2026-01-09 22:40:18,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:41:04] 2026-01-09 22:40:18,541 | INFO     | ***************************************
[2026-01-09 17:41:04] 2026-01-09 22:40:18,541 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:41:04] 2026-01-09 22:40:18,541 | INFO     | ***************************************
[2026-01-09 17:41:04] 2026-01-09 22:40:18,541 | INFO     | 
[2026-01-09 17:41:04] 2026-01-09 22:40:18,567 | INFO     | architecture information:
[2026-01-09 17:41:04] 2026-01-09 22:40:18,567 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:41:04] 2026-01-09 22:40:18,582 | INFO     | cat /etc/os-release:
[2026-01-09 17:41:04] NAME="CentOS Linux"
[2026-01-09 17:41:04] VERSION="7 (Core)"
[2026-01-09 17:41:04] ID="centos"
[2026-01-09 17:41:04] ID_LIKE="rhel fedora"
[2026-01-09 17:41:04] VERSION_ID="7"
[2026-01-09 17:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:41:04] ANSI_COLOR="0;31"
[2026-01-09 17:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:41:04] HOME_URL="https://www.centos.org/"
[2026-01-09 17:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:41:04] 
[2026-01-09 17:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:41:04] 
[2026-01-09 17:41:04] 2026-01-09 22:40:18,582 | INFO     | ***************************************
[2026-01-09 17:41:04] 2026-01-09 22:40:19,086 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 17:41:04] 2026-01-09 22:40:19,107 | INFO     | sufficient remaining disk space (93846503424 B)
[2026-01-09 17:41:04] 2026-01-09 22:40:19,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:41:04] 2026-01-09 22:40:19,107 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:41:04] 2026-01-09 22:40:19,108 | INFO     | update_server=False
[2026-01-09 17:41:04] 2026-01-09 22:40:19,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:41:04] 2026-01-09 22:40:19,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:41:04] 2026-01-09 22:40:19,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:41:04] 2026-01-09 22:40:19,116 | INFO     | aborting loop
[2026-01-09 17:41:04] 2026-01-09 22:40:19,207 | INFO     | all data control threads have been joined
[2026-01-09 17:41:04] 2026-01-09 22:40:19,439 | INFO     | all job control threads have been joined
[2026-01-09 17:41:04] 2026-01-09 22:40:20,112 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:20,116 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:20,133 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:20,200 | INFO     | all payload control threads have been joined
[2026-01-09 17:41:04] 2026-01-09 22:40:20,212 | INFO     | [data] control thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:20,258 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:20,323 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:20,402 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:20,431 | INFO     | [job] validate thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:20,444 | INFO     | [job] control thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:21,112 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:21,205 | INFO     | [payload] control thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:21,435 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:21,545 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:21,636 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:21,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:41:04] 2026-01-09 22:40:22,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:41:04] 2026-01-09 22:40:22,769 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:26,369 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:41:04] 2026-01-09 22:40:50,219 | INFO     | PID=1301396 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:41:04] 2026-01-09 22:40:50,219 | INFO     | .. there are 16 such processes running
[2026-01-09 17:41:04] 2026-01-09 22:40:50,220 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:41:04] 2026-01-09 22:40:50,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:41:04] 2026-01-09 22:40:50,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:41:04] 2026-01-09 22:40:58,844 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:41:04] 2026-01-09 22:40:59,384 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257067059008)>', '<ExcThread(monitor, started 140256426837760)>']
[2026-01-09 17:41:04] 2026-01-09 22:41:00,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:41:04] 2026-01-09 22:41:00,269 | INFO     | [monitor] control thread has ended
[2026-01-09 17:41:04] 2026-01-09 22:41:04,408 | INFO     | all workflow threads have been joined
[2026-01-09 17:41:04] 2026-01-09 22:41:04,411 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:41:04] 2026-01-09 22:41:04,412 | INFO     | traces error code: 0
[2026-01-09 17:41:04] 2026-01-09 22:41:04,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:41:04] 2026-01-09 22:41:04,572 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:41:04] 2026-01-09 22:41:04,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:41:04] 2026-01-09 22:41:04,578 [wrapper] pilotpid: 1301396
[2026-01-09 17:41:04] 2026-01-09 22:41:04,580 [wrapper] Pilot exit status: 0
[2026-01-09 17:41:04] 2026-01-09 22:41:04,608 [wrapper] pandaids: 6963189985
[2026-01-09 17:41:04] 2026-01-09 22:41:04,686 [wrapper] cleanup supervisor_pilot 1698555 1301397
[2026-01-09 17:41:04] 2026-01-09 22:41:04,690 [wrapper] Test setup, not cleaning
[2026-01-09 17:41:04] 2026-01-09 22:41:04,692 [wrapper] apfmon messages muted
[2026-01-09 17:41:04] 2026-01-09 22:41:04,696 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:41:04] 2026-01-09 22:41:04,698 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:41:04]  *** Error codes and diagnostics ***
[2026-01-09 17:41:04]     "exeErrorCode": 0,
[2026-01-09 17:41:04]     "exeErrorDiag": "",
[2026-01-09 17:41:04]     "pilotErrorCode": 0,
[2026-01-09 17:41:04]     "pilotErrorDiag": "",
[2026-01-09 17:41:04]  *** Listing of results directory ***
[2026-01-09 17:41:04] total 439996
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 17:41:04] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:41:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:47 run_atlas
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:47 job.xml
[2026-01-09 17:41:04] -rw-r--r--. 2 boincer umatlas 225363956 Jan  9 14:47 EVNT.47898824._001481.pool.root.1
[2026-01-09 17:41:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:47 start_atlas.sh
[2026-01-09 17:41:04] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:47 shared
[2026-01-09 17:41:04] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 14:47 input.tar.gz
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:47 boinc_lockfile
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 14:47 pandaJob.out
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas        57 Jan  9 14:47 setup.sh.local
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas    989364 Jan  9 14:47 agis_schedconf.cvmfs.json
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:41:04] drwx------. 5 boincer umatlas      4096 Jan  9 14:47 pilot3
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas      6945 Jan  9 17:38 init_data.xml
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas 217672898 Jan  9 17:39 HITS.47898826._038570.pool.root.1
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas       530 Jan  9 17:39 boinc_task_state.xml
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas      1030 Jan  9 17:40 memory_monitor_summary.json
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas    424940 Jan  9 17:40 log.47898826._038570.job.log.tgz.1
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas      7772 Jan  9 17:40 heartbeat.json
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas        95 Jan  9 17:40 pilot_heartbeat.json
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 17:41 boinc_mmap_file
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas        28 Jan  9 17:41 wrapper_checkpoint.txt
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas      4824 Jan  9 17:41 pilotlog.txt
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas   1373875 Jan  9 17:41 log.47898826._038570.job.log.1
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas       357 Jan  9 17:41 output.list
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas       620 Jan  9 17:41 runtime_log
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas   1822720 Jan  9 17:41 result.tar.gz
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 17:41 runtime_log.err
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas       655 Jan  9 17:41 HVSLDmrCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2ygKDmYqYAyn.diag
[2026-01-09 17:41:04] -rw-r--r--. 1 boincer umatlas     21240 Jan  9 17:41 stderr.txt
[2026-01-09 17:41:04] HITS file was successfully produced:
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas 217672898 Jan  9 17:39 shared/HITS.pool.root.1
[2026-01-09 17:41:04]  *** Contents of shared directory: ***
[2026-01-09 17:41:04] total 435040
[2026-01-09 17:41:04] -rw-r--r--. 2 boincer umatlas 225363956 Jan  9 14:47 ATLAS.root_0
[2026-01-09 17:41:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:47 start_atlas.sh
[2026-01-09 17:41:04] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 14:47 input.tar.gz
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas 217672898 Jan  9 17:39 HITS.pool.root.1
[2026-01-09 17:41:04] -rw-------. 1 boincer umatlas   1822720 Jan  9 17:41 result.tar.gz
17:41:06 (1297128): run_atlas exited; CPU time 46207.659258
17:41:06 (1297128): called boinc_finish(0)

</stderr_txt>
]]>

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