Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:29:00 (331358): wrapper (7.7.26015): starting
14:29:00 (331358): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:29:00] Arguments: --nthreads 8
[2026-01-09 14:29:00] Threads: 8
[2026-01-09 14:29:00] Checking for CVMFS
[2026-01-09 14:29:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:29:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:29:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:29:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:29:03] 2.13.3.0 5206 70918 740516 154955 1 245 30883561 40960001 60941 16776704 0 647148433 99.813 309401132 29785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:29:03] CVMFS is ok
[2026-01-09 14:29:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:29:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:29:03] Further information can be found at the LHC@home message board.
[2026-01-09 14:29:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:29:03] Checking for apptainer binary...
[2026-01-09 14:29:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:29:03] Running /usr/bin/apptainer --version
[2026-01-09 14:29:03] apptainer version 1.4.5-2.el9
[2026-01-09 14:29:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:29:03] lc-12-9.aglt2.org
[2026-01-09 14:29:03] apptainer works
[2026-01-09 14:29:04] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:29:04] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:29:04] Starting ATLAS job with PandaID=6963193594
[2026-01-09 14:29:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:02:43]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:02:43] 2026-01-10 04:01:34,050 | INFO     | monitor loop #1489: job 0:6963193594 is in state 'finished'
[2026-01-09 23:02:43] 2026-01-10 04:01:34,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:02:43] 2026-01-10 04:01:35,517 | INFO     | time since job start (30679s) is within the limit (349056.0s)
[2026-01-09 23:02:43] 2026-01-10 04:01:36,590 | INFO     | monitor loop #1490: job 0:6963193594 is in state 'finished'
[2026-01-09 23:02:43] 2026-01-10 04:01:36,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:02:43] 2026-01-10 04:01:37,538 | INFO     | time since job start (30681s) is within the limit (349056.0s)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,096 | INFO     | monitor loop #1491: job 0:6963193594 is in state 'finished'
[2026-01-09 23:02:43] 2026-01-10 04:01:39,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,561 | INFO     | time since job start (30683s) is within the limit (349056.0s)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,729 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 23:02:43] 2026-01-10 04:01:39,735 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2983.161645833334
[2026-01-09 23:02:43] 2026-01-10 04:01:39,752 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963193594/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,753 | INFO     | extracted standard info from prmon json
[2026-01-09 23:02:43] 2026-01-10 04:01:39,753 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:02:43] 2026-01-10 04:01:39,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:02:43] 2026-01-10 04:01:39,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:02:43] 2026-01-10 04:01:39,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:02:43] 2026-01-10 04:01:39,762 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:02:43] 2026-01-10 04:01:39,763 | INFO     | sum of square deviations: 38993203266.43512
[2026-01-09 23:02:43] 2026-01-10 04:01:39,771 | INFO     | sum of deviations: 119584399823.29924
[2026-01-09 23:02:43] 2026-01-10 04:01:39,771 | INFO     | mean x: 1768002400.0558882
[2026-01-09 23:02:43] 2026-01-10 04:01:39,771 | INFO     | mean y: 2516409.2035928145
[2026-01-09 23:02:43] 2026-01-10 04:01:39,771 | INFO     | intersect: -5419595348.381311
[2026-01-09 23:02:43] 2026-01-10 04:01:39,772 | INFO     | chi2: 3.0339111789318545
[2026-01-09 23:02:43] 2026-01-10 04:01:39,773 | INFO     | sum of square deviations: 37837357576.41933
[2026-01-09 23:02:43] 2026-01-10 04:01:39,780 | INFO     | sum of deviations: 149232969027.29053
[2026-01-09 23:02:43] 2026-01-10 04:01:39,780 | INFO     | mean x: 1768002247.5564516
[2026-01-09 23:02:43] 2026-01-10 04:01:39,780 | INFO     | mean y: 2520286.8467741935
[2026-01-09 23:02:43] 2026-01-10 04:01:39,780 | INFO     | intersect: -6970594157.439967
[2026-01-09 23:02:43] 2026-01-10 04:01:39,781 | INFO     | chi2: 2.350845004045098
[2026-01-09 23:02:43] 2026-01-10 04:01:39,781 | INFO     | current chi2=2.350845004045098 (change=22.514376150169387 %)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,781 | INFO     | right removable region: 495
[2026-01-09 23:02:43] 2026-01-10 04:01:39,781 | INFO     | sum of square deviations: 37837340496.41932
[2026-01-09 23:02:43] 2026-01-10 04:01:39,787 | INFO     | sum of deviations: 5223255011.282261
[2026-01-09 23:02:43] 2026-01-10 04:01:39,787 | INFO     | mean x: 1768002552.5564516
[2026-01-09 23:02:43] 2026-01-10 04:01:39,787 | INFO     | mean y: 2531459.3649193547
[2026-01-09 23:02:43] 2026-01-10 04:01:39,788 | INFO     | intersect: -241532422.2779839
[2026-01-09 23:02:43] 2026-01-10 04:01:39,788 | INFO     | chi2: 0.87576216385911
[2026-01-09 23:02:43] 2026-01-10 04:01:39,788 | INFO     | current chi2=0.87576216385911 (change=71.13421876221709 %)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,789 | INFO     | sum of square deviations: 36704578303.515274
[2026-01-09 23:02:43] 2026-01-10 04:01:39,795 | INFO     | sum of deviations: -21737411522.15683
[2026-01-09 23:02:43] 2026-01-10 04:01:39,795 | INFO     | mean x: 1768002705.0549898
[2026-01-09 23:02:43] 2026-01-10 04:01:39,795 | INFO     | mean y: 2535083.635437882
[2026-01-09 23:02:43] 2026-01-10 04:01:39,795 | INFO     | intersect: 1049592539.3639534
[2026-01-09 23:02:43] 2026-01-10 04:01:39,796 | INFO     | chi2: 0.76971668695108
[2026-01-09 23:02:43] 2026-01-10 04:01:39,796 | INFO     | current chi2=0.76971668695108 (change=12.108935654485558 %)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,796 | INFO     | left removable region: 20
[2026-01-09 23:02:43] 2026-01-10 04:01:39,797 | INFO     | sum of square deviations: 33232015320.576878
[2026-01-09 23:02:43] 2026-01-10 04:01:39,801 | INFO     | sum of deviations: 2156542436.3557963
[2026-01-09 23:02:43] 2026-01-10 04:01:39,802 | INFO     | mean x: 1768002827.0547369
[2026-01-09 23:02:43] 2026-01-10 04:01:39,802 | INFO     | mean y: 2540062.4863157896
[2026-01-09 23:02:43] 2026-01-10 04:01:39,802 | INFO     | intersect: -112191863.56030387
[2026-01-09 23:02:43] 2026-01-10 04:01:39,803 | INFO     | chi2: 0.04178470628271213
[2026-01-09 23:02:43] 2026-01-10 04:01:39,803 | INFO     | current memory leak: 0.06 B/s (using 475 data points, chi2=0.04)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,803 | INFO     | could have reported an average CPU frequency of 2923 MHz (20 samples)
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | ..............................
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | . Timing measurements:
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | . get job = 0 s
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | . initial setup = 6 s
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | . payload setup = 40 s
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | . stage-in = 0 s
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | . payload execution = 30530 s
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | . stage-out = 5 s
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | . log creation = 1 s
[2026-01-09 23:02:43] 2026-01-10 04:01:39,804 | INFO     | ..............................
[2026-01-09 23:02:43] 2026-01-10 04:01:40,198 | INFO     | 
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | job summary report
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | --------------------------------------------------
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | PanDA job id: 6963193594
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | task id: 47898826
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | errors: (none)
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | pilot state: finished 
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | transexitcode: 0
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | exeerrorcode: 0
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | exeerrordiag: 
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | exitcode: 0
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | exitmsg: OK
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | cpuconsumptiontime: 59464 s
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | nevents: 400
[2026-01-09 23:02:43] 2026-01-10 04:01:40,199 | INFO     | neventsw: 0
[2026-01-09 23:02:43] 2026-01-10 04:01:40,200 | INFO     | pid: 385939
[2026-01-09 23:02:43] 2026-01-10 04:01:40,200 | INFO     | pgrp: 385939
[2026-01-09 23:02:43] 2026-01-10 04:01:40,200 | INFO     | corecount: 8
[2026-01-09 23:02:43] 2026-01-10 04:01:40,200 | INFO     | event service: False
[2026-01-09 23:02:43] 2026-01-10 04:01:40,200 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 26: 2284317, 34: 2284345, 30577: 2322175, 30578: 2322174, 30584: 2331228, 30585: 2331284, 30618: 2331478}
[2026-01-09 23:02:43] 2026-01-10 04:01:40,200 | INFO     | --------------------------------------------------
[2026-01-09 23:02:43] 2026-01-10 04:01:40,200 | INFO     | 
[2026-01-09 23:02:43] 2026-01-10 04:01:40,200 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 23:02:43] 2026-01-10 04:01:40,369 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | job 6963193594 has completed (purged errors)
[2026-01-09 23:02:43] 2026-01-10 04:01:40,384 | INFO     | overall cleanup function is called
[2026-01-09 23:02:43] 2026-01-10 04:01:41,417 | INFO     | --- collectZombieJob: --- 10, [385939]
[2026-01-09 23:02:43] 2026-01-10 04:01:41,418 | INFO     | zombie collector waiting for pid 385939
[2026-01-09 23:02:43] 2026-01-10 04:01:41,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:02:43] 2026-01-10 04:01:41,418 | INFO     | collected zombie processes
[2026-01-09 23:02:43] 2026-01-10 04:01:41,418 | INFO     | will attempt to kill all subprocesses of pid=385939
[2026-01-09 23:02:43] 2026-01-10 04:01:43,083 | INFO     | process IDs to be killed: [385939] (in reverse order)
[2026-01-09 23:02:43] 2026-01-10 04:01:43,775 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:02:43] 2026-01-10 04:01:43,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:02:43] 2026-01-10 04:01:43,960 | INFO     | did not find any defunct processes belonging to 385939
[2026-01-09 23:02:43] 2026-01-10 04:01:44,188 | INFO     | did not find any defunct processes belonging to 385939
[2026-01-09 23:02:43] 2026-01-10 04:01:44,189 | INFO     | ready for new job
[2026-01-09 23:02:43] 2026-01-10 04:01:44,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:02:43] 2026-01-10 04:01:44,196 | INFO     | ***************************************
[2026-01-09 23:02:43] 2026-01-10 04:01:44,197 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:02:43] 2026-01-10 04:01:44,197 | INFO     | ***************************************
[2026-01-09 23:02:43] 2026-01-10 04:01:44,197 | INFO     | 
[2026-01-09 23:02:43] 2026-01-10 04:01:44,235 | INFO     | architecture information:
[2026-01-09 23:02:43] 2026-01-10 04:01:44,244 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:02:43] 2026-01-10 04:01:44,323 | INFO     | cat /etc/os-release:
[2026-01-09 23:02:43] NAME="CentOS Linux"
[2026-01-09 23:02:43] VERSION="7 (Core)"
[2026-01-09 23:02:43] ID="centos"
[2026-01-09 23:02:43] ID_LIKE="rhel fedora"
[2026-01-09 23:02:43] VERSION_ID="7"
[2026-01-09 23:02:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:02:43] ANSI_COLOR="0;31"
[2026-01-09 23:02:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:02:43] HOME_URL="https://www.centos.org/"
[2026-01-09 23:02:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:02:43] 
[2026-01-09 23:02:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:02:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:02:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:02:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:02:43] 
[2026-01-09 23:02:43] 2026-01-10 04:01:44,323 | INFO     | ***************************************
[2026-01-09 23:02:43] 2026-01-10 04:01:44,827 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 23:02:43] 2026-01-10 04:01:44,975 | INFO     | sufficient remaining disk space (405257846784 B)
[2026-01-09 23:02:43] 2026-01-10 04:01:44,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:02:43] 2026-01-10 04:01:44,976 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:02:43] 2026-01-10 04:01:44,976 | INFO     | update_server=False
[2026-01-09 23:02:43] 2026-01-10 04:01:44,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:02:43] 2026-01-10 04:01:44,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:02:43] 2026-01-10 04:01:45,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:02:43] 2026-01-10 04:01:45,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:02:43] 2026-01-10 04:01:45,167 | INFO     | aborting loop
[2026-01-09 23:02:43] 2026-01-10 04:01:45,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:02:43] 2026-01-10 04:01:45,460 | INFO     | all payload control threads have been joined
[2026-01-09 23:02:43] 2026-01-10 04:01:45,595 | INFO     | all data control threads have been joined
[2026-01-09 23:02:43] 2026-01-10 04:01:45,989 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,058 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,172 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,254 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,269 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,466 | INFO     | [payload] control thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,553 | INFO     | all job control threads have been joined
[2026-01-09 23:02:43] 2026-01-10 04:01:46,632 | INFO     | [data] control thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,666 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,785 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,925 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:46,996 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:47,193 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:47,193 | INFO     | [job] validate thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:47,464 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:47,560 | INFO     | [job] control thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:01:49,166 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:02:43] 2026-01-10 04:02:14,826 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:02:43] 2026-01-10 04:02:16,393 | INFO     | PID=349968 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 23:02:43] 2026-01-10 04:02:16,394 | INFO     | .. there are 96 such processes running
[2026-01-09 23:02:43] 2026-01-10 04:02:16,394 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:02:43] 2026-01-10 04:02:16,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:02:43] 2026-01-10 04:02:16,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:02:43] 2026-01-10 04:02:16,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661291550528)>', '<ExcThread(monitor, started 140660573202176)>']
[2026-01-09 23:02:43] 2026-01-10 04:02:17,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:02:43] 2026-01-10 04:02:17,411 | INFO     | [monitor] control thread has ended
[2026-01-09 23:02:43] 2026-01-10 04:02:21,677 | INFO     | all workflow threads have been joined
[2026-01-09 23:02:43] 2026-01-10 04:02:21,677 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:02:43] 2026-01-10 04:02:21,677 | INFO     | traces error code: 0
[2026-01-09 23:02:43] 2026-01-10 04:02:21,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:02:43] 2026-01-10 04:02:22,411 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:02:43] 2026-01-10 04:02:22,444 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:02:43] 2026-01-10 04:02:22,479 [wrapper] pilotpid: 349968
[2026-01-09 23:02:43] 2026-01-10 04:02:22,506 [wrapper] Pilot exit status: 0
[2026-01-09 23:02:43] 2026-01-10 04:02:22,629 [wrapper] pandaids: 6963193594
[2026-01-09 23:02:43] 2026-01-10 04:02:23,276 [wrapper] cleanup supervisor_pilot 1106312 349970
[2026-01-09 23:02:43] 2026-01-10 04:02:23,300 [wrapper] Test setup, not cleaning
[2026-01-09 23:02:43] 2026-01-10 04:02:23,340 [wrapper] apfmon messages muted
[2026-01-09 23:02:43] 2026-01-10 04:02:23,351 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:02:43] 2026-01-10 04:02:23,377 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:02:43]  *** Error codes and diagnostics ***
[2026-01-09 23:02:43]     "exeErrorCode": 0,
[2026-01-09 23:02:43]     "exeErrorDiag": "",
[2026-01-09 23:02:43]     "pilotErrorCode": 0,
[2026-01-09 23:02:43]     "pilotErrorDiag": "",
[2026-01-09 23:02:43]  *** Listing of results directory ***
[2026-01-09 23:02:43] total 444336
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 23:02:43] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:02:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:29 run_atlas
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:29 job.xml
[2026-01-09 23:02:43] -rw-r--r--. 2 boincer umatlas 223888093 Jan  9 14:29 EVNT.47898824._001501.pool.root.1
[2026-01-09 23:02:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:29 start_atlas.sh
[2026-01-09 23:02:43] drwxrwx--x. 2 boincer umatlas        68 Jan  9 14:29 shared
[2026-01-09 23:02:43] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 14:29 input.tar.gz
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:29 boinc_lockfile
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 14:29 pandaJob.out
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas    989364 Jan  9 14:30 agis_schedconf.cvmfs.json
[2026-01-09 23:02:43] drwx------. 5 boincer umatlas      4096 Jan  9 14:30 pilot3
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas      6798 Jan  9 22:57 init_data.xml
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas 219251858 Jan  9 22:59 HITS.47898826._039067.pool.root.1
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas       531 Jan  9 23:00 boinc_task_state.xml
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas      1056 Jan  9 23:00 memory_monitor_summary.json
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas    634096 Jan  9 23:01 log.47898826._039067.job.log.tgz.1
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas        95 Jan  9 23:01 pilot_heartbeat.json
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas      7827 Jan  9 23:01 heartbeat.json
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas      4824 Jan  9 23:02 pilotlog.txt
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas   3342463 Jan  9 23:02 log.47898826._039067.job.log.1
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas       357 Jan  9 23:02 output.list
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:02 runtime_log
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas   3993600 Jan  9 23:02 result.tar.gz
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas       657 Jan  9 23:02 ZOnNDmdCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnBmKDmvTBk5m.diag
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas      8813 Jan  9 23:02 runtime_log.err
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas        28 Jan  9 23:02 wrapper_checkpoint.txt
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:02 boinc_mmap_file
[2026-01-09 23:02:43] -rw-r--r--. 1 boincer umatlas     21443 Jan  9 23:02 stderr.txt
[2026-01-09 23:02:43] HITS file was successfully produced:
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas 219251858 Jan  9 22:59 shared/HITS.pool.root.1
[2026-01-09 23:02:43]  *** Contents of shared directory: ***
[2026-01-09 23:02:43] total 437260
[2026-01-09 23:02:43] -rw-r--r--. 2 boincer umatlas 223888093 Jan  9 14:29 ATLAS.root_0
[2026-01-09 23:02:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:29 start_atlas.sh
[2026-01-09 23:02:43] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 14:29 input.tar.gz
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas 219251858 Jan  9 22:59 HITS.pool.root.1
[2026-01-09 23:02:43] -rw-------. 1 boincer umatlas   3993600 Jan  9 23:02 result.tar.gz
23:02:45 (331358): run_atlas exited; CPU time 61338.533525
23:02:45 (331358): called boinc_finish(0)

</stderr_txt>
]]>

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