Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:38:49 (12415): wrapper (7.7.26015): starting
23:38:49 (12415): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 23:38:49] Arguments: --nthreads 8
[2026-01-09 23:38:49] Threads: 8
[2026-01-09 23:38:49] Checking for CVMFS
[2026-01-09 23:38:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:38:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:38:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:38:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:38:53] 2.11.2.0 24263 36026 124756 154959 3 101 15074620 25165825 1088 130560 0 17814596 99.823 10870646 3262 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 23:38:53] CVMFS is ok
[2026-01-09 23:38:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:38:53] Checking for apptainer binary...
[2026-01-09 23:38:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 23:38:53] Running /usr/bin/apptainer --version
[2026-01-09 23:38:53] apptainer version 1.3.2-1.el7
[2026-01-09 23:38:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:39:24] cg-vwn484.simple-grid.lan
[2026-01-09 23:39:24] apptainer works
[2026-01-09 23:39:24] Set ATHENA_PROC_NUMBER=8
[2026-01-09 23:39:24] Set ATHENA_CORE_NUMBER=8
[2026-01-09 23:39:24] Starting ATLAS job with PandaID=6963192102
[2026-01-09 23:39:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:23:27]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:23:27] 2026-01-10 04:22:19,918 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 05:23:27] 2026-01-10 04:22:19,919 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-10 05:23:27] 2026-01-10 04:22:19,921 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963192102/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:23:27] 2026-01-10 04:22:19,921 | INFO     | extracted standard info from prmon json
[2026-01-10 05:23:27] 2026-01-10 04:22:19,922 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:23:27] 2026-01-10 04:22:19,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:23:27] 2026-01-10 04:22:19,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 05:23:27] 2026-01-10 04:22:19,922 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 05:23:27] 2026-01-10 04:22:19,931 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:23:27] 2026-01-10 04:22:19,932 | INFO     | sum of square deviations: 10449170802.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,935 | INFO     | sum of deviations: 156978895720.00018
[2026-01-10 05:23:27] 2026-01-10 04:22:19,935 | INFO     | mean x: 1768008974.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,935 | INFO     | mean y: 2439670.411764706
[2026-01-10 05:23:27] 2026-01-10 04:22:19,935 | INFO     | intersect: -26558528814.135216
[2026-01-10 05:23:27] 2026-01-10 04:22:19,936 | INFO     | chi2: 6.306365986445937
[2026-01-10 05:23:27] 2026-01-10 04:22:19,936 | INFO     | sum of square deviations: 9971385099.5
[2026-01-10 05:23:27] 2026-01-10 04:22:19,947 | INFO     | sum of deviations: 175716604513.99997
[2026-01-10 05:23:27] 2026-01-10 04:22:19,947 | INFO     | mean x: 1768008821.5
[2026-01-10 05:23:27] 2026-01-10 04:22:19,947 | INFO     | mean y: 2445565.754716981
[2026-01-10 05:23:27] 2026-01-10 04:22:19,947 | INFO     | intersect: -31153557714.10624
[2026-01-10 05:23:27] 2026-01-10 04:22:19,948 | INFO     | chi2: 5.567989006016181
[2026-01-10 05:23:27] 2026-01-10 04:22:19,948 | INFO     | current chi2=5.567989006016181 (change=11.708438457532038 %)
[2026-01-10 05:23:27] 2026-01-10 04:22:19,948 | INFO     | right removable region: 317
[2026-01-10 05:23:27] 2026-01-10 04:22:19,948 | INFO     | sum of square deviations: 9971385099.5
[2026-01-10 05:23:27] 2026-01-10 04:22:19,952 | INFO     | sum of deviations: 47541670558.49999
[2026-01-10 05:23:27] 2026-01-10 04:22:19,952 | INFO     | mean x: 1768009126.5
[2026-01-10 05:23:27] 2026-01-10 04:22:19,952 | INFO     | mean y: 2474577.8584905663
[2026-01-10 05:23:27] 2026-01-10 04:22:19,952 | INFO     | intersect: -8427057187.06142
[2026-01-10 05:23:27] 2026-01-10 04:22:19,953 | INFO     | chi2: 1.8695804842508152
[2026-01-10 05:23:27] 2026-01-10 04:22:19,953 | INFO     | current chi2=1.8695804842508152 (change=70.35407573443973 %)
[2026-01-10 05:23:27] 2026-01-10 04:22:19,953 | INFO     | sum of square deviations: 9508390372.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,956 | INFO     | sum of deviations: 1673316132.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,957 | INFO     | mean x: 1768009279.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,957 | INFO     | mean y: 2489597.392971246
[2026-01-10 05:23:27] 2026-01-10 04:22:19,957 | INFO     | intersect: -308650178.35585606
[2026-01-10 05:23:27] 2026-01-10 04:22:19,957 | INFO     | chi2: 0.8077196521340732
[2026-01-10 05:23:27] 2026-01-10 04:22:19,958 | INFO     | current chi2=0.8077196521340732 (change=56.79674349736564 %)
[2026-01-10 05:23:27] 2026-01-10 04:22:19,958 | INFO     | sum of square deviations: 9059954057.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,961 | INFO     | sum of deviations: 2972488519.999996
[2026-01-10 05:23:27] 2026-01-10 04:22:19,961 | INFO     | mean x: 1768009431.5
[2026-01-10 05:23:27] 2026-01-10 04:22:19,961 | INFO     | mean y: 2489151.298701299
[2026-01-10 05:23:27] 2026-01-10 04:22:19,961 | INFO     | intersect: -577578661.9950091
[2026-01-10 05:23:27] 2026-01-10 04:22:19,962 | INFO     | chi2: 0.7916580112002465
[2026-01-10 05:23:27] 2026-01-10 04:22:19,962 | INFO     | current chi2=0.7916580112002465 (change=1.9885167943345525 %)
[2026-01-10 05:23:27] 2026-01-10 04:22:19,962 | INFO     | left removable region: 30
[2026-01-10 05:23:27] 2026-01-10 04:22:19,963 | INFO     | sum of square deviations: 7330250928.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,965 | INFO     | sum of deviations: 15012840357.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,971 | INFO     | mean x: 1768009706.0
[2026-01-10 05:23:27] 2026-01-10 04:22:19,972 | INFO     | mean y: 2499129.1219512196
[2026-01-10 05:23:27] 2026-01-10 04:22:19,972 | INFO     | intersect: -3618502078.9562707
[2026-01-10 05:23:27] 2026-01-10 04:22:19,972 | INFO     | chi2: 0.0009846642490620584
[2026-01-10 05:23:27] 2026-01-10 04:22:19,972 | INFO     | current memory leak: 2.05 B/s (using 287 data points, chi2=0.00)
[2026-01-10 05:23:27] 2026-01-10 04:22:19,973 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-10 05:23:27] 2026-01-10 04:22:19,973 | INFO     | ..............................
[2026-01-10 05:23:27] 2026-01-10 04:22:19,973 | INFO     | . Timing measurements:
[2026-01-10 05:23:27] 2026-01-10 04:22:19,973 | INFO     | . get job = 0 s
[2026-01-10 05:23:27] 2026-01-10 04:22:19,974 | INFO     | . initial setup = 11 s
[2026-01-10 05:23:27] 2026-01-10 04:22:19,974 | INFO     | . payload setup = 142 s
[2026-01-10 05:23:27] 2026-01-10 04:22:19,974 | INFO     | . stage-in = 0 s
[2026-01-10 05:23:27] 2026-01-10 04:22:19,974 | INFO     | . payload execution = 19834 s
[2026-01-10 05:23:27] 2026-01-10 04:22:19,974 | INFO     | . stage-out = 4 s
[2026-01-10 05:23:27] 2026-01-10 04:22:19,974 | INFO     | . log creation = 1 s
[2026-01-10 05:23:27] 2026-01-10 04:22:19,974 | INFO     | ..............................
[2026-01-10 05:23:27] 2026-01-10 04:22:20,419 | INFO     | 
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | job summary report
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | --------------------------------------------------
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | PanDA job id: 6963192102
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | task id: 47898826
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | errors: (none)
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | pilot state: finished 
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | transexitcode: 0
[2026-01-10 05:23:27] 2026-01-10 04:22:20,420 | INFO     | exeerrorcode: 0
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | exeerrordiag: 
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | exitcode: 0
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | exitmsg: OK
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | cpuconsumptiontime: 72663 s
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | nevents: 400
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | neventsw: 0
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | pid: 22643
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | pgrp: 22643
[2026-01-10 05:23:27] 2026-01-10 04:22:20,421 | INFO     | corecount: 8
[2026-01-10 05:23:27] 2026-01-10 04:22:20,422 | INFO     | event service: False
[2026-01-10 05:23:27] 2026-01-10 04:22:20,422 | INFO     | sizes: {0: 2283745, 1: 2284000, 12: 2284000, 23: 2284028, 34: 2284056, 44: 2284084, 55: 2284240, 66: 2284268, 77: 2284296, 87: 2284352, 98: 2284380, 109: 2284688, 
[2026-01-10 05:23:27] 2026-01-10 04:22:20,422 | INFO     | --------------------------------------------------
[2026-01-10 05:23:27] 2026-01-10 04:22:20,422 | INFO     | 
[2026-01-10 05:23:27] 2026-01-10 04:22:20,422 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-10 05:23:27] 2026-01-10 04:22:20,905 | INFO     | time since job start (20320s) is within the limit (349056.0s)
[2026-01-10 05:23:27] 2026-01-10 04:22:21,050 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,050 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,050 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,052 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:23:27] 2026-01-10 04:22:21,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,052 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:23:27] 2026-01-10 04:22:21,052 | INFO     | job 6963192102 has completed (purged errors)
[2026-01-10 05:23:27] 2026-01-10 04:22:21,052 | INFO     | overall cleanup function is called
[2026-01-10 05:23:27] 2026-01-10 04:22:22,060 | INFO     | --- collectZombieJob: --- 10, [22643]
[2026-01-10 05:23:27] 2026-01-10 04:22:22,061 | INFO     | zombie collector waiting for pid 22643
[2026-01-10 05:23:27] 2026-01-10 04:22:22,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:23:27] 2026-01-10 04:22:22,061 | INFO     | collected zombie processes
[2026-01-10 05:23:27] 2026-01-10 04:22:22,061 | INFO     | will attempt to kill all subprocesses of pid=22643
[2026-01-10 05:23:27] 2026-01-10 04:22:22,153 | INFO     | process IDs to be killed: [22643] (in reverse order)
[2026-01-10 05:23:27] 2026-01-10 04:22:22,220 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:23:27] 2026-01-10 04:22:22,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:23:27] 2026-01-10 04:22:22,227 | INFO     | did not find any defunct processes belonging to 22643
[2026-01-10 05:23:27] 2026-01-10 04:22:22,230 | INFO     | did not find any defunct processes belonging to 22643
[2026-01-10 05:23:27] 2026-01-10 04:22:22,230 | INFO     | ready for new job
[2026-01-10 05:23:27] 2026-01-10 04:22:22,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:23:27] 2026-01-10 04:22:22,232 | INFO     | ***************************************
[2026-01-10 05:23:27] 2026-01-10 04:22:22,232 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:23:27] 2026-01-10 04:22:22,232 | INFO     | ***************************************
[2026-01-10 05:23:27] 2026-01-10 04:22:22,233 | INFO     | 
[2026-01-10 05:23:27] 2026-01-10 04:22:22,233 | INFO     | pilot is running in a VM
[2026-01-10 05:23:27] 2026-01-10 04:22:22,233 | INFO     | architecture information:
[2026-01-10 05:23:27] 2026-01-10 04:22:22,239 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:23:27] 2026-01-10 04:22:22,353 | INFO     | cat /etc/os-release:
[2026-01-10 05:23:27] NAME="CentOS Linux"
[2026-01-10 05:23:27] VERSION="7 (Core)"
[2026-01-10 05:23:27] ID="centos"
[2026-01-10 05:23:27] ID_LIKE="rhel fedora"
[2026-01-10 05:23:27] VERSION_ID="7"
[2026-01-10 05:23:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:23:27] ANSI_COLOR="0;31"
[2026-01-10 05:23:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:23:27] HOME_URL="https://www.centos.org/"
[2026-01-10 05:23:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:23:27] 
[2026-01-10 05:23:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:23:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:23:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:23:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:23:27] 
[2026-01-10 05:23:27] 2026-01-10 04:22:22,353 | INFO     | ***************************************
[2026-01-10 05:23:27] 2026-01-10 04:22:22,857 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-10 05:23:27] 2026-01-10 04:22:22,988 | INFO     | sufficient remaining disk space (494562967552 B)
[2026-01-10 05:23:27] 2026-01-10 04:22:22,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:23:27] 2026-01-10 04:22:22,988 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:23:27] 2026-01-10 04:22:22,989 | INFO     | update_server=False
[2026-01-10 05:23:27] 2026-01-10 04:22:22,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:23:27] 2026-01-10 04:22:22,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:23:27] 2026-01-10 04:22:22,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:23:27] 2026-01-10 04:22:23,015 | INFO     | all data control threads have been joined
[2026-01-10 05:23:27] 2026-01-10 04:22:23,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:23:27] 2026-01-10 04:22:23,038 | INFO     | aborting loop
[2026-01-10 05:23:27] 2026-01-10 04:22:23,995 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:24,019 | INFO     | all payload control threads have been joined
[2026-01-10 05:23:27] 2026-01-10 04:22:24,023 | INFO     | [data] control thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:24,044 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:24,087 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:24,113 | INFO     | all job control threads have been joined
[2026-01-10 05:23:27] 2026-01-10 04:22:24,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:24,541 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:24,666 | INFO     | [job] validate thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:24,838 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:24,996 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:25,025 | INFO     | [payload] control thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:25,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:23:27] 2026-01-10 04:22:25,119 | INFO     | [job] control thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:25,147 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:25,320 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:25,362 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:26,121 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:27,000 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:23:27] 2026-01-10 04:22:54,043 | INFO     | PID=16162 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 05:23:27] 2026-01-10 04:22:54,044 | INFO     | .. there are 2 such processes running
[2026-01-10 05:23:27] 2026-01-10 04:22:54,044 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:23:27] 2026-01-10 04:22:54,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:23:27] 2026-01-10 04:22:54,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:23:27] 2026-01-10 04:23:14,733 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:23:27] 2026-01-10 04:23:16,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947889379136)>', '<ExcThread(monitor, started 139947432449792)>']
[2026-01-10 05:23:27] 2026-01-10 04:23:17,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:23:27] 2026-01-10 04:23:17,181 | INFO     | [monitor] control thread has ended
[2026-01-10 05:23:27] 2026-01-10 04:23:21,492 | INFO     | all workflow threads have been joined
[2026-01-10 05:23:27] 2026-01-10 04:23:21,493 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:23:27] 2026-01-10 04:23:21,493 | INFO     | traces error code: 0
[2026-01-10 05:23:27] 2026-01-10 04:23:21,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:23:27] 2026-01-10 04:23:21,975 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:23:27] 2026-01-10 04:23:22,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:23:27] 2026-01-10 04:23:22,156 [wrapper] pilotpid: 16162
[2026-01-10 05:23:27] 2026-01-10 04:23:22,282 [wrapper] Pilot exit status: 0
[2026-01-10 05:23:27] 2026-01-10 04:23:22,756 [wrapper] pandaids: 6963192102
[2026-01-10 05:23:27] 2026-01-10 04:23:23,965 [wrapper] cleanup supervisor_pilot 22800 16163
[2026-01-10 05:23:27] 2026-01-10 04:23:24,076 [wrapper] Test setup, not cleaning
[2026-01-10 05:23:27] 2026-01-10 04:23:24,169 [wrapper] apfmon messages muted
[2026-01-10 05:23:27] 2026-01-10 04:23:24,269 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:23:27] 2026-01-10 04:23:24,399 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:23:27]  *** Error codes and diagnostics ***
[2026-01-10 05:23:27]     "exeErrorCode": 0,
[2026-01-10 05:23:27]     "exeErrorDiag": "",
[2026-01-10 05:23:27]     "pilotErrorCode": 0,
[2026-01-10 05:23:27]     "pilotErrorDiag": "",
[2026-01-10 05:23:27]  *** Listing of results directory ***
[2026-01-10 05:23:27] total 439244
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 05:23:27] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc       100 Jan  9 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:23:27] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 23:38 run_atlas
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc       105 Jan  9 23:38 job.xml
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc      6393 Jan  9 23:38 init_data.xml
[2026-01-10 05:23:27] -rw-r--r--. 2 boinc boinc 224710881 Jan  9 23:38 EVNT.47898824._001497.pool.root.1
[2026-01-10 05:23:27] -rw-r--r--. 2 boinc boinc     15847 Jan  9 23:38 start_atlas.sh
[2026-01-10 05:23:27] drwxrwx--x. 2 boinc boinc        68 Jan  9 23:38 shared
[2026-01-10 05:23:27] -rw-r--r--. 2 boinc boinc    592405 Jan  9 23:38 input.tar.gz
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc         0 Jan  9 23:38 boinc_lockfile
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc      2520 Jan  9 23:39 pandaJob.out
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc    989375 Jan  9 23:43 agis_schedconf.cvmfs.json
[2026-01-10 05:23:27] drwx------. 5 boinc boinc      4096 Jan  9 23:43 pilot3
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc 214625900 Jan 10 05:19 HITS.47898826._038970.pool.root.1
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc       531 Jan 10 05:19 boinc_task_state.xml
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc      1013 Jan 10 05:20 memory_monitor_summary.json
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc   1516240 Jan 10 05:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc    546914 Jan 10 05:20 log.47898826._038970.job.log.tgz.1
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc        95 Jan 10 05:22 pilot_heartbeat.json
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc      7778 Jan 10 05:22 heartbeat.json
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc      4885 Jan 10 05:23 pilotlog.txt
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc   2726089 Jan 10 05:23 log.47898826._038970.job.log.1
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc       357 Jan 10 05:23 output.list
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc        28 Jan 10 05:23 wrapper_checkpoint.txt
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc       620 Jan 10 05:23 runtime_log
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc   3297280 Jan 10 05:23 result.tar.gz
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc      8833 Jan 10 05:23 runtime_log.err
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc       657 Jan 10 05:23 hfOMDmdCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJBmKDmo1JU8m.diag
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc      8192 Jan 10 05:23 boinc_mmap_file
[2026-01-10 05:23:27] -rw-r--r--. 1 boinc boinc     20722 Jan 10 05:23 stderr.txt
[2026-01-10 05:23:27] HITS file was successfully produced:
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc 214625900 Jan 10 05:19 shared/HITS.pool.root.1
[2026-01-10 05:23:27]  *** Contents of shared directory: ***
[2026-01-10 05:23:27] total 432860
[2026-01-10 05:23:27] -rw-r--r--. 2 boinc boinc 224710881 Jan  9 23:38 ATLAS.root_0
[2026-01-10 05:23:27] -rw-r--r--. 2 boinc boinc     15847 Jan  9 23:38 start_atlas.sh
[2026-01-10 05:23:27] -rw-r--r--. 2 boinc boinc    592405 Jan  9 23:38 input.tar.gz
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc 214625900 Jan 10 05:19 HITS.pool.root.1
[2026-01-10 05:23:27] -rw-------. 1 boinc boinc   3297280 Jan 10 05:23 result.tar.gz
05:23:29 (12415): run_atlas exited; CPU time 72849.432103
05:23:29 (12415): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN