Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:38:22 (336583): wrapper (7.7.26015): starting
14:38:22 (336583): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:38:22] Arguments: --nthreads 8
[2026-01-09 14:38:22] Threads: 8
[2026-01-09 14:38:22] Checking for CVMFS
[2026-01-09 14:38:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:38:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:38:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:38:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:38:23] 2.13.3.0 11460 93841 144308 154955 0 105 16943715 32935936 21413 16776704 0 757527332 99.641 694408024 35562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:38:23] CVMFS is ok
[2026-01-09 14:38:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:38:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:38:23] Further information can be found at the LHC@home message board.
[2026-01-09 14:38:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:38:23] Checking for apptainer binary...
[2026-01-09 14:38:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:38:23] Running /usr/bin/apptainer --version
[2026-01-09 14:38:23] apptainer version 1.4.5-2.el9
[2026-01-09 14:38:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:38:23] c7-3-34.aglt2.org
[2026-01-09 14:38:23] apptainer works
[2026-01-09 14:38:23] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:38:23] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:38:23] Starting ATLAS job with PandaID=6963189972
[2026-01-09 14:38:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:14:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:14:17] 2026-01-10 00:13:38,555 | INFO     | executing command: lscpu
[2026-01-09 19:14:17] 2026-01-10 00:13:38,639 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 19:14:17] 2026-01-10 00:13:38,924 | INFO     | time since job start (16499s) is within the limit (349056.0s)
[2026-01-09 19:14:17] 2026-01-10 00:13:39,725 | INFO     | monitor loop #1162: job 0:6963189972 is in state 'finished'
[2026-01-09 19:14:17] 2026-01-10 00:13:39,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:14:17] 2026-01-10 00:13:40,931 | INFO     | time since job start (16501s) is within the limit (349056.0s)
[2026-01-09 19:14:17] 2026-01-10 00:13:42,229 | INFO     | monitor loop #1163: job 0:6963189972 is in state 'finished'
[2026-01-09 19:14:17] 2026-01-10 00:13:42,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:14:17] 2026-01-10 00:13:42,952 | INFO     | time since job start (16503s) is within the limit (349056.0s)
[2026-01-09 19:14:17] 2026-01-10 00:13:43,685 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:14:17] 2026-01-10 00:13:43,691 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3149.865666666667
[2026-01-09 19:14:17] 2026-01-10 00:13:43,704 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963189972/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:14:17] 2026-01-10 00:13:43,705 | INFO     | extracted standard info from prmon json
[2026-01-09 19:14:17] 2026-01-10 00:13:43,705 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:14:17] 2026-01-10 00:13:43,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:14:17] 2026-01-10 00:13:43,705 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:14:17] 2026-01-10 00:13:43,705 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:14:17] 2026-01-10 00:13:43,722 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:14:17] 2026-01-10 00:13:43,722 | INFO     | sum of square deviations: 6103305199.440729
[2026-01-09 19:14:17] 2026-01-10 00:13:43,751 | INFO     | sum of deviations: 91789128663.8852
[2026-01-09 19:14:17] 2026-01-10 00:13:43,752 | INFO     | mean x: 1767995756.5148149
[2026-01-09 19:14:17] 2026-01-10 00:13:43,752 | INFO     | mean y: 2445348.4037037035
[2026-01-09 19:14:17] 2026-01-10 00:13:43,752 | INFO     | intersect: -26586883657.593243
[2026-01-09 19:14:17] 2026-01-10 00:13:43,752 | INFO     | chi2: 3.5817552491791567
[2026-01-09 19:14:17] 2026-01-10 00:13:43,752 | INFO     | sum of square deviations: 5770472271.939644
[2026-01-09 19:14:17] 2026-01-10 00:13:43,754 | INFO     | sum of deviations: 106545116978.7132
[2026-01-09 19:14:17] 2026-01-10 00:13:43,754 | INFO     | mean x: 1767995604.0150943
[2026-01-09 19:14:17] 2026-01-10 00:13:43,754 | INFO     | mean y: 2451993.0716981133
[2026-01-09 19:14:17] 2026-01-10 00:13:43,754 | INFO     | intersect: -32641548284.62502
[2026-01-09 19:14:17] 2026-01-10 00:13:43,754 | INFO     | chi2: 2.8984844919080994
[2026-01-09 19:14:17] 2026-01-10 00:13:43,754 | INFO     | current chi2=2.8984844919080994 (change=19.07642230517132 %)
[2026-01-09 19:14:17] 2026-01-10 00:13:43,754 | INFO     | right removable region: 264
[2026-01-09 19:14:17] 2026-01-10 00:13:43,755 | INFO     | sum of square deviations: 5770469831.939644
[2026-01-09 19:14:17] 2026-01-10 00:13:43,756 | INFO     | sum of deviations: 22963055679.743393
[2026-01-09 19:14:17] 2026-01-10 00:13:43,756 | INFO     | mean x: 1767995909.0150943
[2026-01-09 19:14:17] 2026-01-10 00:13:43,756 | INFO     | mean y: 2476808.0641509434
[2026-01-09 19:14:17] 2026-01-10 00:13:43,756 | INFO     | intersect: -7033100828.189712
[2026-01-09 19:14:17] 2026-01-10 00:13:43,757 | INFO     | chi2: 1.0458379671720226
[2026-01-09 19:14:17] 2026-01-10 00:13:43,757 | INFO     | current chi2=1.0458379671720226 (change=70.8009650460706 %)
[2026-01-09 19:14:17] 2026-01-10 00:13:43,757 | INFO     | sum of square deviations: 5449960276.938428
[2026-01-09 19:14:17] 2026-01-10 00:13:43,758 | INFO     | sum of deviations: 1752121538.31538
[2026-01-09 19:14:17] 2026-01-10 00:13:43,758 | INFO     | mean x: 1767996061.5153847
[2026-01-09 19:14:17] 2026-01-10 00:13:43,759 | INFO     | mean y: 2486862.796153846
[2026-01-09 19:14:17] 2026-01-10 00:13:43,759 | INFO     | intersect: -565910670.6952387
[2026-01-09 19:14:17] 2026-01-10 00:13:43,759 | INFO     | chi2: 0.795339199233126
[2026-01-09 19:14:17] 2026-01-10 00:13:43,759 | INFO     | current chi2=0.795339199233126 (change=23.951967302951605 %)
[2026-01-09 19:14:17] 2026-01-10 00:13:43,759 | INFO     | left removable region: 20
[2026-01-09 19:14:17] 2026-01-10 00:13:43,759 | INFO     | sum of square deviations: 4504453200.934417
[2026-01-09 19:14:17] 2026-01-10 00:13:43,761 | INFO     | sum of deviations: 5670994300.639345
[2026-01-09 19:14:17] 2026-01-10 00:13:43,761 | INFO     | mean x: 1767996183.5163934
[2026-01-09 19:14:17] 2026-01-10 00:13:43,761 | INFO     | mean y: 2500675.0901639345
[2026-01-09 19:14:17] 2026-01-10 00:13:43,761 | INFO     | intersect: -2223362450.359491
[2026-01-09 19:14:17] 2026-01-10 00:13:43,761 | INFO     | chi2: 0.034765005979338216
[2026-01-09 19:14:17] 2026-01-10 00:13:43,761 | INFO     | current memory leak: 1.26 B/s (using 244 data points, chi2=0.03)
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | could have reported an average CPU frequency of 3136 MHz (13 samples)
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | ..............................
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | . Timing measurements:
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | . get job = 0 s
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | . initial setup = 3 s
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | . payload setup = 8 s
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | . stage-in = 0 s
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | . payload execution = 16461 s
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | . stage-out = 2 s
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | . log creation = 0 s
[2026-01-09 19:14:17] 2026-01-10 00:13:43,762 | INFO     | ..............................
[2026-01-09 19:14:17] 2026-01-10 00:13:43,952 | INFO     | 
[2026-01-09 19:14:17] 2026-01-10 00:13:43,970 | INFO     | job summary report
[2026-01-09 19:14:17] 2026-01-10 00:13:43,971 | INFO     | --------------------------------------------------
[2026-01-09 19:14:17] 2026-01-10 00:13:43,971 | INFO     | PanDA job id: 6963189972
[2026-01-09 19:14:17] 2026-01-10 00:13:43,971 | INFO     | task id: 47898826
[2026-01-09 19:14:17] 2026-01-10 00:13:43,971 | INFO     | errors: (none)
[2026-01-09 19:14:17] 2026-01-10 00:13:43,971 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:14:17] 2026-01-10 00:13:43,971 | INFO     | pilot state: finished 
[2026-01-09 19:14:17] 2026-01-10 00:13:43,971 | INFO     | transexitcode: 0
[2026-01-09 19:14:17] 2026-01-10 00:13:43,976 | INFO     | exeerrorcode: 0
[2026-01-09 19:14:17] 2026-01-10 00:13:43,976 | INFO     | exeerrordiag: 
[2026-01-09 19:14:17] 2026-01-10 00:13:43,976 | INFO     | exitcode: 0
[2026-01-09 19:14:17] 2026-01-10 00:13:43,976 | INFO     | exitmsg: OK
[2026-01-09 19:14:17] 2026-01-10 00:13:43,976 | INFO     | cpuconsumptiontime: 47183 s
[2026-01-09 19:14:17] 2026-01-10 00:13:43,976 | INFO     | nevents: 400
[2026-01-09 19:14:17] 2026-01-10 00:13:43,976 | INFO     | neventsw: 0
[2026-01-09 19:14:17] 2026-01-10 00:13:43,977 | INFO     | pid: 347319
[2026-01-09 19:14:17] 2026-01-10 00:13:43,977 | INFO     | pgrp: 347319
[2026-01-09 19:14:17] 2026-01-10 00:13:43,977 | INFO     | corecount: 8
[2026-01-09 19:14:17] 2026-01-10 00:13:43,977 | INFO     | event service: False
[2026-01-09 19:14:17] 2026-01-10 00:13:43,977 | INFO     | sizes: {0: 2283971, 8: 2284233, 11: 2284261, 16474: 2315942, 16477: 2324940, 16479: 2324996, 16487: 2325318}
[2026-01-09 19:14:17] 2026-01-10 00:13:43,977 | INFO     | --------------------------------------------------
[2026-01-09 19:14:17] 2026-01-10 00:13:43,977 | INFO     | 
[2026-01-09 19:14:17] 2026-01-10 00:13:43,977 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | job 6963189972 has completed (purged errors)
[2026-01-09 19:14:17] 2026-01-10 00:13:44,035 | INFO     | overall cleanup function is called
[2026-01-09 19:14:17] 2026-01-10 00:13:45,051 | INFO     | --- collectZombieJob: --- 10, [347319]
[2026-01-09 19:14:17] 2026-01-10 00:13:45,051 | INFO     | zombie collector waiting for pid 347319
[2026-01-09 19:14:17] 2026-01-10 00:13:45,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:14:17] 2026-01-10 00:13:45,052 | INFO     | collected zombie processes
[2026-01-09 19:14:17] 2026-01-10 00:13:45,052 | INFO     | will attempt to kill all subprocesses of pid=347319
[2026-01-09 19:14:17] 2026-01-10 00:13:45,509 | INFO     | process IDs to be killed: [347319] (in reverse order)
[2026-01-09 19:14:17] 2026-01-10 00:13:45,622 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:14:17] 2026-01-10 00:13:45,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:14:17] 2026-01-10 00:13:45,705 | INFO     | did not find any defunct processes belonging to 347319
[2026-01-09 19:14:17] 2026-01-10 00:13:45,726 | INFO     | did not find any defunct processes belonging to 347319
[2026-01-09 19:14:17] 2026-01-10 00:13:45,726 | INFO     | ready for new job
[2026-01-09 19:14:17] 2026-01-10 00:13:45,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:14:17] 2026-01-10 00:13:45,730 | INFO     | ***************************************
[2026-01-09 19:14:17] 2026-01-10 00:13:45,730 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:14:17] 2026-01-10 00:13:45,730 | INFO     | ***************************************
[2026-01-09 19:14:17] 2026-01-10 00:13:45,730 | INFO     | 
[2026-01-09 19:14:17] 2026-01-10 00:13:45,751 | INFO     | architecture information:
[2026-01-09 19:14:17] 2026-01-10 00:13:45,761 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:14:17] 2026-01-10 00:13:45,788 | INFO     | cat /etc/os-release:
[2026-01-09 19:14:17] NAME="CentOS Linux"
[2026-01-09 19:14:17] VERSION="7 (Core)"
[2026-01-09 19:14:17] ID="centos"
[2026-01-09 19:14:17] ID_LIKE="rhel fedora"
[2026-01-09 19:14:17] VERSION_ID="7"
[2026-01-09 19:14:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:14:17] ANSI_COLOR="0;31"
[2026-01-09 19:14:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:14:17] HOME_URL="https://www.centos.org/"
[2026-01-09 19:14:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:14:17] 
[2026-01-09 19:14:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:14:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:14:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:14:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:14:17] 
[2026-01-09 19:14:17] 2026-01-10 00:13:45,788 | INFO     | ***************************************
[2026-01-09 19:14:17] 2026-01-10 00:13:46,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 19:14:17] 2026-01-10 00:13:46,321 | INFO     | sufficient remaining disk space (73352085504 B)
[2026-01-09 19:14:17] 2026-01-10 00:13:46,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:14:17] 2026-01-10 00:13:46,322 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:14:17] 2026-01-10 00:13:46,322 | INFO     | update_server=False
[2026-01-09 19:14:17] 2026-01-10 00:13:46,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:14:17] 2026-01-10 00:13:46,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:14:17] 2026-01-10 00:13:46,322 | INFO     | aborting loop
[2026-01-09 19:14:17] 2026-01-10 00:13:46,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:14:17] 2026-01-10 00:13:47,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:14:17] 2026-01-10 00:13:47,283 | INFO     | all data control threads have been joined
[2026-01-09 19:14:17] 2026-01-10 00:13:47,327 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:47,328 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:47,541 | INFO     | all job control threads have been joined
[2026-01-09 19:14:17] 2026-01-10 00:13:47,562 | INFO     | all payload control threads have been joined
[2026-01-09 19:14:17] 2026-01-10 00:13:47,793 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:47,799 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:47,873 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:48,289 | INFO     | [data] control thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:48,440 | INFO     | [job] validate thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:48,523 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:48,547 | INFO     | [job] control thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:48,568 | INFO     | [payload] control thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:48,618 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:48,693 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:48,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:14:17] 2026-01-10 00:13:48,881 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:49,065 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:49,861 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:13:50,821 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:14:17] 2026-01-10 00:14:06,915 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:14:17] 2026-01-10 00:14:07,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086966032192)>', '<ExcThread(monitor, started 140086624626432)>']
[2026-01-09 19:14:17] 2026-01-10 00:14:12,260 | INFO     | all workflow threads have been joined
[2026-01-09 19:14:17] 2026-01-10 00:14:12,261 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:14:17] 2026-01-10 00:14:12,261 | INFO     | traces error code: 0
[2026-01-09 19:14:17] 2026-01-10 00:14:12,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:14:17] 2026-01-10 00:14:16,535 | INFO     | PID=340873 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 19:14:17] 2026-01-10 00:14:16,535 | INFO     | .. there are 17 such processes running
[2026-01-09 19:14:17] 2026-01-10 00:14:16,535 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:14:17] 2026-01-10 00:14:16,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:14:17] 2026-01-10 00:14:16,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:14:17] 2026-01-10 00:14:16,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:14:17] 2026-01-10 00:14:16,535 | INFO     | [monitor] control thread has ended
[2026-01-09 19:14:17] 2026-01-10 00:14:16,806 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:14:17] 2026-01-10 00:14:16,808 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:14:17] 2026-01-10 00:14:16,810 [wrapper] pilotpid: 340873
[2026-01-09 19:14:17] 2026-01-10 00:14:16,812 [wrapper] Pilot exit status: 0
[2026-01-09 19:14:17] 2026-01-10 00:14:16,833 [wrapper] pandaids: 6963189972
[2026-01-09 19:14:17] 2026-01-10 00:14:16,954 [wrapper] cleanup supervisor_pilot 1055504 340874
[2026-01-09 19:14:17] 2026-01-10 00:14:16,956 [wrapper] Test setup, not cleaning
[2026-01-09 19:14:17] 2026-01-10 00:14:16,958 [wrapper] apfmon messages muted
[2026-01-09 19:14:17] 2026-01-10 00:14:16,960 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:14:17] 2026-01-10 00:14:16,962 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:14:17]  *** Error codes and diagnostics ***
[2026-01-09 19:14:17]     "exeErrorCode": 0,
[2026-01-09 19:14:17]     "exeErrorDiag": "",
[2026-01-09 19:14:17]     "pilotErrorCode": 0,
[2026-01-09 19:14:17]     "pilotErrorDiag": "",
[2026-01-09 19:14:17]  *** Listing of results directory ***
[2026-01-09 19:14:17] total 443592
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 19:14:17] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:14:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:38 run_atlas
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:38 job.xml
[2026-01-09 19:14:17] -rw-r--r--. 2 boincer umatlas 225363956 Jan  9 14:38 EVNT.47898824._001481.pool.root.1
[2026-01-09 19:14:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:38 start_atlas.sh
[2026-01-09 19:14:17] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:38 shared
[2026-01-09 19:14:17] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 14:38 input.tar.gz
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:38 boinc_lockfile
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 14:38 pandaJob.out
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas        57 Jan  9 14:38 setup.sh.local
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas    989364 Jan  9 14:38 agis_schedconf.cvmfs.json
[2026-01-09 19:14:17] drwx------. 5 boincer umatlas      4096 Jan  9 14:38 pilot3
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas      6945 Jan  9 19:09 init_data.xml
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas 219433434 Jan  9 19:12 HITS.47898826._038557.pool.root.1
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas       530 Jan  9 19:12 boinc_task_state.xml
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas      1044 Jan  9 19:13 memory_monitor_summary.json
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:13 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas    488971 Jan  9 19:13 log.47898826._038557.job.log.tgz.1
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas        95 Jan  9 19:13 pilot_heartbeat.json
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas      7783 Jan  9 19:13 heartbeat.json
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:14 wrapper_checkpoint.txt
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:14 boinc_mmap_file
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas       822 Jan  9 19:14 pilotlog.txt
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas   2274222 Jan  9 19:14 log.47898826._038557.job.log.1
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas       357 Jan  9 19:14 output.list
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:14 runtime_log
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas   2785280 Jan  9 19:14 result.tar.gz
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas       660 Jan  9 19:14 VlHLDmrCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxygKDmhL1IQn.diag
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 19:14 runtime_log.err
[2026-01-09 19:14:17] -rw-r--r--. 1 boincer umatlas     21436 Jan  9 19:14 stderr.txt
[2026-01-09 19:14:17] HITS file was successfully produced:
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas 219433434 Jan  9 19:12 shared/HITS.pool.root.1
[2026-01-09 19:14:17]  *** Contents of shared directory: ***
[2026-01-09 19:14:17] total 437696
[2026-01-09 19:14:17] -rw-r--r--. 2 boincer umatlas 225363956 Jan  9 14:38 ATLAS.root_0
[2026-01-09 19:14:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:38 start_atlas.sh
[2026-01-09 19:14:17] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 14:38 input.tar.gz
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas 219433434 Jan  9 19:12 HITS.pool.root.1
[2026-01-09 19:14:17] -rw-------. 1 boincer umatlas   2785280 Jan  9 19:14 result.tar.gz
19:14:18 (336583): run_atlas exited; CPU time 47679.799568
19:14:18 (336583): called boinc_finish(0)

</stderr_txt>
]]>

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