Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:55:52 (24909): wrapper (7.7.26015): starting
13:55:52 (24909): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:55:52] Arguments: --nthreads 8
[2026-01-09 13:55:52] Threads: 8
[2026-01-09 13:55:52] Checking for CVMFS
[2026-01-09 13:55:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:55:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:55:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:55:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:55:52] 2.11.2.0 14221 181415 139160 154953 0 186 10290563 18432000 669 130560 0 122445891 99.980 6973100 32160 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:55:52] CVMFS is ok
[2026-01-09 13:55:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:55:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:55:52] Further information can be found at the LHC@home message board.
[2026-01-09 13:55:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:55:52] Checking for apptainer binary...
[2026-01-09 13:55:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:55:52] Running /usr/bin/apptainer --version
[2026-01-09 13:55:52] apptainer version 1.3.2-1.el7
[2026-01-09 13:55:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:55:53] c-206-9.aglt2.org
[2026-01-09 13:55:53] apptainer works
[2026-01-09 13:55:53] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:55:53] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:55:53] Starting ATLAS job with PandaID=6963189486
[2026-01-09 13:55:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:21:53]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:21:53] 2026-01-09 23:21:19,936 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1740.2083333333333
[2026-01-09 18:21:53] 2026-01-09 23:21:19,939 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963189486/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:21:53] 2026-01-09 23:21:19,940 | INFO     | extracted standard info from prmon json
[2026-01-09 18:21:53] 2026-01-09 23:21:19,940 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:21:53] 2026-01-09 23:21:19,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:21:53] 2026-01-09 23:21:19,941 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:21:53] 2026-01-09 23:21:19,941 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:21:53] 2026-01-09 23:21:19,945 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:21:53] 2026-01-09 23:21:19,946 | INFO     | sum of square deviations: 5513070810.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,947 | INFO     | sum of deviations: 35506001234.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,947 | INFO     | mean x: 1767992922.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,947 | INFO     | mean y: 2461394.099616858
[2026-01-09 18:21:53] 2026-01-09 23:21:19,948 | INFO     | intersect: -11383998354.679714
[2026-01-09 18:21:53] 2026-01-09 23:21:19,948 | INFO     | chi2: 2.0829681603474146
[2026-01-09 18:21:53] 2026-01-09 23:21:19,948 | INFO     | sum of square deviations: 5202255680.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,950 | INFO     | sum of deviations: 52201559714.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,950 | INFO     | mean x: 1767992769.5
[2026-01-09 18:21:53] 2026-01-09 23:21:19,950 | INFO     | mean y: 2469450.296875
[2026-01-09 18:21:53] 2026-01-09 23:21:19,950 | INFO     | intersect: -17738292597.55666
[2026-01-09 18:21:53] 2026-01-09 23:21:19,950 | INFO     | chi2: 1.2599779154890711
[2026-01-09 18:21:53] 2026-01-09 23:21:19,950 | INFO     | current chi2=1.2599779154890711 (change=39.51045726599481 %)
[2026-01-09 18:21:53] 2026-01-09 23:21:19,951 | INFO     | sum of square deviations: 4903347750.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,952 | INFO     | sum of deviations: 50959081519.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,952 | INFO     | mean x: 1767992617.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,952 | INFO     | mean y: 2468816.322709163
[2026-01-09 18:21:53] 2026-01-09 23:21:19,952 | INFO     | intersect: -18371769456.843445
[2026-01-09 18:21:53] 2026-01-09 23:21:19,953 | INFO     | chi2: 1.2599473924196765
[2026-01-09 18:21:53] 2026-01-09 23:21:19,953 | INFO     | current chi2=1.2599473924196765 (change=0.0024225082852196993 %)
[2026-01-09 18:21:53] 2026-01-09 23:21:19,953 | INFO     | right removable region: 250
[2026-01-09 18:21:53] 2026-01-09 23:21:19,953 | INFO     | sum of square deviations: 5202255680.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,955 | INFO     | sum of deviations: -1109333983.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,955 | INFO     | mean x: 1767993074.5
[2026-01-09 18:21:53] 2026-01-09 23:21:19,955 | INFO     | mean y: 2479208.84375
[2026-01-09 18:21:53] 2026-01-09 23:21:19,955 | INFO     | intersect: 379487745.11997944
[2026-01-09 18:21:53] 2026-01-09 23:21:19,955 | INFO     | chi2: 0.8425217914347612
[2026-01-09 18:21:53] 2026-01-09 23:21:19,955 | INFO     | current chi2=0.8425217914347612 (change=59.55186413918882 %)
[2026-01-09 18:21:53] 2026-01-09 23:21:19,956 | INFO     | sum of square deviations: 4903347750.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,957 | INFO     | sum of deviations: -1524021804.000002
[2026-01-09 18:21:53] 2026-01-09 23:21:19,957 | INFO     | mean x: 1767993227.0
[2026-01-09 18:21:53] 2026-01-09 23:21:19,957 | INFO     | mean y: 2479411.1633466138
[2026-01-09 18:21:53] 2026-01-09 23:21:19,957 | INFO     | intersect: 551993817.371294
[2026-01-09 18:21:53] 2026-01-09 23:21:19,958 | INFO     | chi2: 0.8404882437944681
[2026-01-09 18:21:53] 2026-01-09 23:21:19,958 | INFO     | current chi2=0.8404882437944681 (change=0.24136439685793448 %)
[2026-01-09 18:21:53] 2026-01-09 23:21:19,958 | INFO     | left removable region: 20
[2026-01-09 18:21:53] 2026-01-09 23:21:19,958 | INFO     | sum of square deviations: 3772712597.5
[2026-01-09 18:21:53] 2026-01-09 23:21:19,960 | INFO     | sum of deviations: 11964513739.499998
[2026-01-09 18:21:53] 2026-01-09 23:21:19,960 | INFO     | mean x: 1767993196.5
[2026-01-09 18:21:53] 2026-01-09 23:21:19,960 | INFO     | mean y: 2489437.1695652176
[2026-01-09 18:21:53] 2026-01-09 23:21:19,960 | INFO     | intersect: -5604399066.578108
[2026-01-09 18:21:53] 2026-01-09 23:21:19,960 | INFO     | chi2: 0.001313620969929224
[2026-01-09 18:21:53] 2026-01-09 23:21:19,960 | INFO     | current memory leak: 3.17 B/s (using 230 data points, chi2=0.00)
[2026-01-09 18:21:53] 2026-01-09 23:21:19,961 | INFO     | could have reported an average CPU frequency of 2363 MHz (12 samples)
[2026-01-09 18:21:53] 2026-01-09 23:21:19,961 | INFO     | ..............................
[2026-01-09 18:21:53] 2026-01-09 23:21:19,961 | INFO     | . Timing measurements:
[2026-01-09 18:21:53] 2026-01-09 23:21:19,961 | INFO     | . get job = 0 s
[2026-01-09 18:21:53] 2026-01-09 23:21:19,961 | INFO     | . initial setup = 2 s
[2026-01-09 18:21:53] 2026-01-09 23:21:19,961 | INFO     | . payload setup = 6 s
[2026-01-09 18:21:53] 2026-01-09 23:21:19,962 | INFO     | . stage-in = 0 s
[2026-01-09 18:21:53] 2026-01-09 23:21:19,962 | INFO     | . payload execution = 15880 s
[2026-01-09 18:21:53] 2026-01-09 23:21:19,962 | INFO     | . stage-out = 1 s
[2026-01-09 18:21:53] 2026-01-09 23:21:19,962 | INFO     | . log creation = 0 s
[2026-01-09 18:21:53] 2026-01-09 23:21:19,962 | INFO     | ..............................
[2026-01-09 18:21:53] 2026-01-09 23:21:20,045 | INFO     | 
[2026-01-09 18:21:53] 2026-01-09 23:21:20,045 | INFO     | job summary report
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | --------------------------------------------------
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | PanDA job id: 6963189486
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | task id: 47898826
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | errors: (none)
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | pilot state: finished 
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | transexitcode: 0
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | exeerrorcode: 0
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | exeerrordiag: 
[2026-01-09 18:21:53] 2026-01-09 23:21:20,046 | INFO     | exitcode: 0
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | exitmsg: OK
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | cpuconsumptiontime: 122884 s
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | nevents: 400
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | neventsw: 0
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | pid: 8578
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | pgrp: 8578
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | corecount: 8
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | event service: False
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 11: 2284317, 15890: 2315636, 15892: 2324634, 15894: 2324818, 15899: 2325012}
[2026-01-09 18:21:53] 2026-01-09 23:21:20,047 | INFO     | --------------------------------------------------
[2026-01-09 18:21:53] 2026-01-09 23:21:20,048 | INFO     | 
[2026-01-09 18:21:53] 2026-01-09 23:21:20,048 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 18:21:53] 2026-01-09 23:21:20,068 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,068 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,068 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,068 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,070 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:21:53] 2026-01-09 23:21:20,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,070 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:21:53] 2026-01-09 23:21:20,070 | INFO     | job 6963189486 has completed (purged errors)
[2026-01-09 18:21:53] 2026-01-09 23:21:20,070 | INFO     | overall cleanup function is called
[2026-01-09 18:21:53] 2026-01-09 23:21:21,077 | INFO     | --- collectZombieJob: --- 10, [8578]
[2026-01-09 18:21:53] 2026-01-09 23:21:21,077 | INFO     | zombie collector waiting for pid 8578
[2026-01-09 18:21:53] 2026-01-09 23:21:21,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:21:53] 2026-01-09 23:21:21,078 | INFO     | collected zombie processes
[2026-01-09 18:21:53] 2026-01-09 23:21:21,078 | INFO     | will attempt to kill all subprocesses of pid=8578
[2026-01-09 18:21:53] 2026-01-09 23:21:21,183 | INFO     | process IDs to be killed: [8578] (in reverse order)
[2026-01-09 18:21:53] 2026-01-09 23:21:21,228 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:21:53] 2026-01-09 23:21:21,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:21:53] 2026-01-09 23:21:21,231 | INFO     | did not find any defunct processes belonging to 8578
[2026-01-09 18:21:53] 2026-01-09 23:21:21,233 | INFO     | did not find any defunct processes belonging to 8578
[2026-01-09 18:21:53] 2026-01-09 23:21:21,233 | INFO     | ready for new job
[2026-01-09 18:21:53] 2026-01-09 23:21:21,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:21:53] 2026-01-09 23:21:21,235 | INFO     | ***************************************
[2026-01-09 18:21:53] 2026-01-09 23:21:21,235 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:21:53] 2026-01-09 23:21:21,235 | INFO     | ***************************************
[2026-01-09 18:21:53] 2026-01-09 23:21:21,236 | INFO     | 
[2026-01-09 18:21:53] 2026-01-09 23:21:21,236 | INFO     | architecture information:
[2026-01-09 18:21:53] 2026-01-09 23:21:21,237 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:21:53] 2026-01-09 23:21:21,249 | INFO     | cat /etc/os-release:
[2026-01-09 18:21:53] NAME="CentOS Linux"
[2026-01-09 18:21:53] VERSION="7 (Core)"
[2026-01-09 18:21:53] ID="centos"
[2026-01-09 18:21:53] ID_LIKE="rhel fedora"
[2026-01-09 18:21:53] VERSION_ID="7"
[2026-01-09 18:21:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:21:53] ANSI_COLOR="0;31"
[2026-01-09 18:21:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:21:53] HOME_URL="https://www.centos.org/"
[2026-01-09 18:21:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:21:53] 
[2026-01-09 18:21:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:21:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:21:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:21:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:21:53] 
[2026-01-09 18:21:53] 2026-01-09 23:21:21,249 | INFO     | ***************************************
[2026-01-09 18:21:53] 2026-01-09 23:21:21,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 18:21:53] 2026-01-09 23:21:21,766 | INFO     | sufficient remaining disk space (28275900416 B)
[2026-01-09 18:21:53] 2026-01-09 23:21:21,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:21:53] 2026-01-09 23:21:21,767 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:21:53] 2026-01-09 23:21:21,767 | INFO     | update_server=False
[2026-01-09 18:21:53] 2026-01-09 23:21:21,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:21:53] 2026-01-09 23:21:21,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:21:53] 2026-01-09 23:21:21,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:21:53] 2026-01-09 23:21:21,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:21:53] 2026-01-09 23:21:21,923 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:21:53] 2026-01-09 23:21:21,923 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:21:53] 2026-01-09 23:21:21,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:21:53] 2026-01-09 23:21:21,924 | INFO     | will abort loop
[2026-01-09 18:21:53] 2026-01-09 23:21:21,924 | INFO     | all job control threads have been joined
[2026-01-09 18:21:53] 2026-01-09 23:21:22,471 | INFO     | all payload control threads have been joined
[2026-01-09 18:21:53] 2026-01-09 23:21:22,772 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:22,773 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:22,799 | INFO     | all data control threads have been joined
[2026-01-09 18:21:53] 2026-01-09 23:21:22,929 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:22,929 | INFO     | [job] control thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:23,309 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:23,347 | INFO     | [job] validate thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:23,372 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:23,473 | INFO     | [payload] control thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:23,670 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:23,773 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:23,804 | INFO     | [data] control thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:23,993 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:24,221 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:24,258 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:25,774 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:31,797 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:21:53] 2026-01-09 23:21:32,201 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:21:53] 2026-01-09 23:21:33,207 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:21:53] 2026-01-09 23:21:33,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495375726400)>', '<ExcThread(monitor, started 140494797522688)>']
[2026-01-09 18:21:53] 2026-01-09 23:21:38,428 | INFO     | all workflow threads have been joined
[2026-01-09 18:21:53] 2026-01-09 23:21:38,428 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:21:53] 2026-01-09 23:21:38,429 | INFO     | traces error code: 0
[2026-01-09 18:21:53] 2026-01-09 23:21:38,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:21:53] 2026-01-09 23:21:52,869 | INFO     | PID=28659 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 18:21:53] 2026-01-09 23:21:52,870 | INFO     | .. there are 3 such processes running
[2026-01-09 18:21:53] 2026-01-09 23:21:52,870 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:21:53] 2026-01-09 23:21:52,870 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:21:53] 2026-01-09 23:21:52,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:21:53] 2026-01-09 23:21:52,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:21:53] 2026-01-09 23:21:52,871 | INFO     | [monitor] control thread has ended
[2026-01-09 18:21:53] 2026-01-09 23:21:52,971 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:21:53] 2026-01-09 23:21:52,975 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:21:53] 2026-01-09 23:21:52,978 [wrapper] pilotpid: 28659
[2026-01-09 18:21:53] 2026-01-09 23:21:52,982 [wrapper] Pilot exit status: 0
[2026-01-09 18:21:53] 2026-01-09 23:21:52,994 [wrapper] pandaids: 6963189486
[2026-01-09 18:21:53] 2026-01-09 23:21:53,031 [wrapper] cleanup supervisor_pilot 12789 28660
[2026-01-09 18:21:53] 2026-01-09 23:21:53,034 [wrapper] Test setup, not cleaning
[2026-01-09 18:21:53] 2026-01-09 23:21:53,038 [wrapper] apfmon messages muted
[2026-01-09 18:21:53] 2026-01-09 23:21:53,041 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:21:53] 2026-01-09 23:21:53,045 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:21:53]  *** Error codes and diagnostics ***
[2026-01-09 18:21:53]     "exeErrorCode": 0,
[2026-01-09 18:21:53]     "exeErrorDiag": "",
[2026-01-09 18:21:53]     "pilotErrorCode": 0,
[2026-01-09 18:21:53]     "pilotErrorDiag": "",
[2026-01-09 18:21:53]  *** Listing of results directory ***
[2026-01-09 18:21:53] total 440368
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 18:21:53] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas       100 Jan  9 13:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:21:53] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 13:55 run_atlas
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas       105 Jan  9 13:55 job.xml
[2026-01-09 18:21:53] -rw-r--r-- 2 boincer umatlas 222332332 Jan  9 13:55 EVNT.47898824._001473.pool.root.1
[2026-01-09 18:21:53] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 13:55 start_atlas.sh
[2026-01-09 18:21:53] drwxrwx--x 2 boincer umatlas      4096 Jan  9 13:55 shared
[2026-01-09 18:21:53] -rw-r--r-- 2 boincer umatlas    592395 Jan  9 13:55 input.tar.gz
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas         0 Jan  9 13:55 boinc_lockfile
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 13:55 pandaJob.out
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas        57 Jan  9 13:55 setup.sh.local
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas    989372 Jan  9 13:56 agis_schedconf.cvmfs.json
[2026-01-09 18:21:53] drwx------ 5 boincer umatlas      4096 Jan  9 13:56 pilot3
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas      5951 Jan  9 18:19 init_data.xml
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas 219304872 Jan  9 18:20 HITS.47898826._038355.pool.root.1
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas       532 Jan  9 18:20 boinc_task_state.xml
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas        95 Jan  9 18:20 pilot_heartbeat.json
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas      1052 Jan  9 18:21 memory_monitor_summary.json
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas   1516240 Jan  9 18:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas    477189 Jan  9 18:21 log.47898826._038355.job.log.tgz.1
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas      7858 Jan  9 18:21 heartbeat.json
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas        29 Jan  9 18:21 wrapper_checkpoint.txt
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas       820 Jan  9 18:21 pilotlog.txt
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas   2214205 Jan  9 18:21 log.47898826._038355.job.log.1
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas       357 Jan  9 18:21 output.list
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas       620 Jan  9 18:21 runtime_log
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas   2713600 Jan  9 18:21 result.tar.gz
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 18:21 runtime_log.err
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas       661 Jan  9 18:21 b48KDmeCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmexgKDmrOr9jm.diag
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 18:21 boinc_mmap_file
[2026-01-09 18:21:53] -rw-r--r-- 1 boincer umatlas     21046 Jan  9 18:21 stderr.txt
[2026-01-09 18:21:53] HITS file was successfully produced:
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas 219304872 Jan  9 18:20 shared/HITS.pool.root.1
[2026-01-09 18:21:53]  *** Contents of shared directory: ***
[2026-01-09 18:21:53] total 434544
[2026-01-09 18:21:53] -rw-r--r-- 2 boincer umatlas 222332332 Jan  9 13:55 ATLAS.root_0
[2026-01-09 18:21:53] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 13:55 start_atlas.sh
[2026-01-09 18:21:53] -rw-r--r-- 2 boincer umatlas    592395 Jan  9 13:55 input.tar.gz
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas 219304872 Jan  9 18:20 HITS.pool.root.1
[2026-01-09 18:21:53] -rw------- 1 boincer umatlas   2713600 Jan  9 18:21 result.tar.gz
18:21:54 (24909): run_atlas exited; CPU time 123085.135108
18:21:54 (24909): called boinc_finish(0)

</stderr_txt>
]]>

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