Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:03:07 (1139573): wrapper (7.7.26015): starting
04:03:07 (1139573): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 04:03:07] Arguments: --nthreads 12
[2026-01-11 04:03:07] Threads: 12
[2026-01-11 04:03:07] Checking for CVMFS
[2026-01-11 04:03:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 04:03:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 04:03:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 04:03:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 04:03:09] 2.13.3.0 40677 2771 56536 155002 0 253 3191410 4096000 10686 130560 0 14922721 99.965 314562 274 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-11 04:03:09] CVMFS is ok
[2026-01-11 04:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 04:03:09] Checking for apptainer binary...
[2026-01-11 04:03:09] apptainer is not installed, using version from CVMFS
[2026-01-11 04:03:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 04:03:11] epyc7v12
[2026-01-11 04:03:11] apptainer works
[2026-01-11 04:03:11] Set ATHENA_PROC_NUMBER=12
[2026-01-11 04:03:11] Set ATHENA_CORE_NUMBER=12
[2026-01-11 04:03:11] Starting ATLAS job with PandaID=6963189507
[2026-01-11 04:03:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:51:10]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:51:10] 2026-01-11 06:50:04,393 | INFO     | intersect: -8141975968.667231
[2026-01-11 06:51:10] 2026-01-11 06:50:04,394 | INFO     | chi2: 0.0024213068247802057
[2026-01-11 06:51:10] 2026-01-11 06:50:04,394 | INFO     | current chi2=0.0024213068247802057 (change=97.93326259919608 %)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,396 | INFO     | sum of square deviations: 984943942.9931941
[2026-01-11 06:51:10] 2026-01-11 06:50:04,397 | INFO     | sum of deviations: 3679003349.693877
[2026-01-11 06:51:10] 2026-01-11 06:50:04,397 | INFO     | mean x: 1768109669.0068028
[2026-01-11 06:51:10] 2026-01-11 06:50:04,397 | INFO     | mean y: 2672062.3061224488
[2026-01-11 06:51:10] 2026-01-11 06:50:04,397 | INFO     | intersect: -6601644296.18039
[2026-01-11 06:51:10] 2026-01-11 06:50:04,398 | INFO     | chi2: 0.0012701493312302248
[2026-01-11 06:51:10] 2026-01-11 06:50:04,398 | INFO     | current chi2=0.0012701493312302248 (change=47.542817860536005 %)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,398 | INFO     | sum of square deviations: 887816235.4929576
[2026-01-11 06:51:10] 2026-01-11 06:50:04,399 | INFO     | sum of deviations: 2850382566.323943
[2026-01-11 06:51:10] 2026-01-11 06:50:04,399 | INFO     | mean x: 1768109821.5070422
[2026-01-11 06:51:10] 2026-01-11 06:50:04,399 | INFO     | mean y: 2673359.676056338
[2026-01-11 06:51:10] 2026-01-11 06:50:04,399 | INFO     | intersect: -5673939895.511244
[2026-01-11 06:51:10] 2026-01-11 06:50:04,399 | INFO     | chi2: 0.0008979094916207964
[2026-01-11 06:51:10] 2026-01-11 06:50:04,400 | INFO     | current chi2=0.0008979094916207964 (change=29.306777593536122 %)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,405 | INFO     | sum of square deviations: 797293302.9927018
[2026-01-11 06:51:10] 2026-01-11 06:50:04,406 | INFO     | sum of deviations: 2189572295.6058393
[2026-01-11 06:51:10] 2026-01-11 06:50:04,406 | INFO     | mean x: 1768109974.0072992
[2026-01-11 06:51:10] 2026-01-11 06:50:04,406 | INFO     | mean y: 2674473.394160584
[2026-01-11 06:51:10] 2026-01-11 06:50:04,406 | INFO     | intersect: -4853009877.821544
[2026-01-11 06:51:10] 2026-01-11 06:50:04,406 | INFO     | chi2: 0.0006597669041406455
[2026-01-11 06:51:10] 2026-01-11 06:50:04,407 | INFO     | current chi2=0.0006597669041406455 (change=26.521892206561382 %)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,407 | INFO     | sum of square deviations: 713142582.9924244
[2026-01-11 06:51:10] 2026-01-11 06:50:04,408 | INFO     | sum of deviations: 1546700793.0
[2026-01-11 06:51:10] 2026-01-11 06:50:04,408 | INFO     | mean x: 1768110126.5075758
[2026-01-11 06:51:10] 2026-01-11 06:50:04,408 | INFO     | mean y: 2675638.0
[2026-01-11 06:51:10] 2026-01-11 06:50:04,410 | INFO     | intersect: -3832093733.5124125
[2026-01-11 06:51:10] 2026-01-11 06:50:04,410 | INFO     | chi2: 0.00034146582194537634
[2026-01-11 06:51:10] 2026-01-11 06:50:04,410 | INFO     | current chi2=0.00034146582194537634 (change=48.24447546514329 %)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,411 | INFO     | sum of square deviations: 635131512.9921248
[2026-01-11 06:51:10] 2026-01-11 06:50:04,411 | INFO     | sum of deviations: 1092674222.7559054
[2026-01-11 06:51:10] 2026-01-11 06:50:04,411 | INFO     | mean x: 1768110279.007874
[2026-01-11 06:51:10] 2026-01-11 06:50:04,412 | INFO     | mean y: 2676524.244094488
[2026-01-11 06:51:10] 2026-01-11 06:50:04,412 | INFO     | intersect: -3039163607.0384655
[2026-01-11 06:51:10] 2026-01-11 06:50:04,412 | INFO     | chi2: 0.00017294108800959554
[2026-01-11 06:51:10] 2026-01-11 06:50:04,412 | INFO     | current chi2=0.00017294108800959554 (change=49.35332414110229 %)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,412 | INFO     | sum of square deviations: 563027530.4918019
[2026-01-11 06:51:10] 2026-01-11 06:50:04,417 | INFO     | sum of deviations: 864235909.3442621
[2026-01-11 06:51:10] 2026-01-11 06:50:04,417 | INFO     | mean x: 1768110431.5081968
[2026-01-11 06:51:10] 2026-01-11 06:50:04,417 | INFO     | mean y: 2677005.155737705
[2026-01-11 06:51:10] 2026-01-11 06:50:04,417 | INFO     | intersect: -2711336864.2207828
[2026-01-11 06:51:10] 2026-01-11 06:50:04,418 | INFO     | chi2: 0.00014401007461892277
[2026-01-11 06:51:10] 2026-01-11 06:50:04,418 | INFO     | current chi2=0.00014401007461892277 (change=16.72882582366288 %)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,418 | INFO     | left removable region: 80
[2026-01-11 06:51:10] 2026-01-11 06:50:04,418 | INFO     | sum of square deviations: 136094660.98684177
[2026-01-11 06:51:10] 2026-01-11 06:50:04,418 | INFO     | sum of deviations: 29139229.5
[2026-01-11 06:51:10] 2026-01-11 06:50:04,418 | INFO     | mean x: 1768111468.5131578
[2026-01-11 06:51:10] 2026-01-11 06:50:04,418 | INFO     | mean y: 2679506.5
[2026-01-11 06:51:10] 2026-01-11 06:50:04,419 | INFO     | intersect: -375890861.2792933
[2026-01-11 06:51:10] 2026-01-11 06:50:04,419 | INFO     | chi2: 2.7526386332380885e-05
[2026-01-11 06:51:10] 2026-01-11 06:50:04,419 | INFO     | current memory leak: 0.21 B/s (using 76 data points, chi2=0.00)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,420 | INFO     | could have reported an average CPU frequency of 2505 MHz (9 samples)
[2026-01-11 06:51:10] 2026-01-11 06:50:04,422 | INFO     | ..............................
[2026-01-11 06:51:10] 2026-01-11 06:50:04,422 | INFO     | . Timing measurements:
[2026-01-11 06:51:10] 2026-01-11 06:50:04,422 | INFO     | . get job = 0 s
[2026-01-11 06:51:10] 2026-01-11 06:50:04,422 | INFO     | . initial setup = 3 s
[2026-01-11 06:51:10] 2026-01-11 06:50:04,422 | INFO     | . payload setup = 19 s
[2026-01-11 06:51:10] 2026-01-11 06:50:04,422 | INFO     | . stage-in = 0 s
[2026-01-11 06:51:10] 2026-01-11 06:50:04,422 | INFO     | . payload execution = 9894 s
[2026-01-11 06:51:10] 2026-01-11 06:50:04,423 | INFO     | . stage-out = 2 s
[2026-01-11 06:51:10] 2026-01-11 06:50:04,423 | INFO     | . log creation = 0 s
[2026-01-11 06:51:10] 2026-01-11 06:50:04,423 | INFO     | ..............................
[2026-01-11 06:51:10] 2026-01-11 06:50:05,125 | INFO     | 
[2026-01-11 06:51:10] 2026-01-11 06:50:05,125 | INFO     | job summary report
[2026-01-11 06:51:10] 2026-01-11 06:50:05,126 | INFO     | --------------------------------------------------
[2026-01-11 06:51:10] 2026-01-11 06:50:05,126 | INFO     | PanDA job id: 6963189507
[2026-01-11 06:51:10] 2026-01-11 06:50:05,126 | INFO     | task id: 47898826
[2026-01-11 06:51:10] 2026-01-11 06:50:05,126 | INFO     | errors: (none)
[2026-01-11 06:51:10] 2026-01-11 06:50:05,126 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:51:10] 2026-01-11 06:50:05,128 | INFO     | pilot state: finished 
[2026-01-11 06:51:10] 2026-01-11 06:50:05,128 | INFO     | transexitcode: 0
[2026-01-11 06:51:10] 2026-01-11 06:50:05,128 | INFO     | exeerrorcode: 0
[2026-01-11 06:51:10] 2026-01-11 06:50:05,128 | INFO     | exeerrordiag: 
[2026-01-11 06:51:10] 2026-01-11 06:50:05,128 | INFO     | exitcode: 0
[2026-01-11 06:51:10] 2026-01-11 06:50:05,128 | INFO     | exitmsg: OK
[2026-01-11 06:51:10] 2026-01-11 06:50:05,128 | INFO     | cpuconsumptiontime: 60158 s
[2026-01-11 06:51:10] 2026-01-11 06:50:05,128 | INFO     | nevents: 400
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | neventsw: 0
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | pid: 1151118
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | pgrp: 1151118
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | corecount: 12
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | event service: False
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | sizes: {0: 2283141, 1: 2283849, 2: 2284048, 13: 2284048, 19: 2284366, 24: 2284394, 9918: 2313246, 9921: 2322290, 9922: 2322346, 9940: 2322604}
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | --------------------------------------------------
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | 
[2026-01-11 06:51:10] 2026-01-11 06:50:05,129 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-11 06:51:10] 2026-01-11 06:50:05,190 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:51:10] 2026-01-11 06:50:05,192 | INFO     | job 6963189507 has completed (purged errors)
[2026-01-11 06:51:10] 2026-01-11 06:50:05,193 | INFO     | overall cleanup function is called
[2026-01-11 06:51:10] 2026-01-11 06:50:06,206 | INFO     | --- collectZombieJob: --- 10, [1151118]
[2026-01-11 06:51:10] 2026-01-11 06:50:06,206 | INFO     | zombie collector waiting for pid 1151118
[2026-01-11 06:51:10] 2026-01-11 06:50:06,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:51:10] 2026-01-11 06:50:06,207 | INFO     | collected zombie processes
[2026-01-11 06:51:10] 2026-01-11 06:50:06,207 | INFO     | will attempt to kill all subprocesses of pid=1151118
[2026-01-11 06:51:10] 2026-01-11 06:50:07,397 | INFO     | process IDs to be killed: [1151118] (in reverse order)
[2026-01-11 06:51:10] 2026-01-11 06:50:08,107 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:51:10] 2026-01-11 06:50:08,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:51:10] 2026-01-11 06:50:08,124 | INFO     | did not find any defunct processes belonging to 1151118
[2026-01-11 06:51:10] 2026-01-11 06:50:08,162 | INFO     | did not find any defunct processes belonging to 1151118
[2026-01-11 06:51:10] 2026-01-11 06:50:08,163 | INFO     | ready for new job
[2026-01-11 06:51:10] 2026-01-11 06:50:08,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:51:10] 2026-01-11 06:50:08,167 | INFO     | ***************************************
[2026-01-11 06:51:10] 2026-01-11 06:50:08,168 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:51:10] 2026-01-11 06:50:08,168 | INFO     | ***************************************
[2026-01-11 06:51:10] 2026-01-11 06:50:08,168 | INFO     | 
[2026-01-11 06:51:10] 2026-01-11 06:50:08,193 | INFO     | architecture information:
[2026-01-11 06:51:10] 2026-01-11 06:50:08,197 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:51:10] 2026-01-11 06:50:08,258 | INFO     | cat /etc/os-release:
[2026-01-11 06:51:10] NAME="CentOS Linux"
[2026-01-11 06:51:10] VERSION="7 (Core)"
[2026-01-11 06:51:10] ID="centos"
[2026-01-11 06:51:10] ID_LIKE="rhel fedora"
[2026-01-11 06:51:10] VERSION_ID="7"
[2026-01-11 06:51:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:51:10] ANSI_COLOR="0;31"
[2026-01-11 06:51:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:51:10] HOME_URL="https://www.centos.org/"
[2026-01-11 06:51:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:51:10] 
[2026-01-11 06:51:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:51:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:51:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:51:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:51:10] 
[2026-01-11 06:51:10] 2026-01-11 06:50:08,261 | INFO     | ***************************************
[2026-01-11 06:51:10] 2026-01-11 06:50:08,763 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-11 06:51:10] 2026-01-11 06:50:08,827 | INFO     | sufficient remaining disk space (368329097216 B)
[2026-01-11 06:51:10] 2026-01-11 06:50:08,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:51:10] 2026-01-11 06:50:08,827 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:51:10] 2026-01-11 06:50:08,828 | INFO     | update_server=False
[2026-01-11 06:51:10] 2026-01-11 06:50:08,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:51:10] 2026-01-11 06:50:08,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:51:10] 2026-01-11 06:50:08,828 | INFO     | aborting loop
[2026-01-11 06:51:10] 2026-01-11 06:50:08,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:51:10] 2026-01-11 06:50:08,986 | INFO     | all data control threads have been joined
[2026-01-11 06:51:10] 2026-01-11 06:50:09,640 | INFO     | all job control threads have been joined
[2026-01-11 06:51:10] 2026-01-11 06:50:09,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:51:10] 2026-01-11 06:50:09,832 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:09,836 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:09,853 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:09,903 | INFO     | all payload control threads have been joined
[2026-01-11 06:51:10] 2026-01-11 06:50:09,991 | INFO     | [data] control thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:51:10] 2026-01-11 06:50:10,441 | INFO     | [job] validate thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,446 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,600 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,608 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,645 | INFO     | [job] control thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,720 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,908 | INFO     | [payload] control thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,914 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:10,973 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:11,181 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:14,293 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:18,994 | INFO     | job.realtimelogging is not enabled
[2026-01-11 06:51:10] 2026-01-11 06:50:20,002 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:51:10] 2026-01-11 06:50:37,979 | INFO     | PID=1143787 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 06:51:10] 2026-01-11 06:50:37,979 | INFO     | .. there are 12 such processes running
[2026-01-11 06:51:10] 2026-01-11 06:50:37,979 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:51:10] 2026-01-11 06:50:37,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:51:10] 2026-01-11 06:50:37,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:51:10] 2026-01-11 06:51:03,830 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:51:10] 2026-01-11 06:51:04,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131936853407552)>', '<ExcThread(monitor, started 131936446027520)>']
[2026-01-11 06:51:10] 2026-01-11 06:51:04,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:51:10] 2026-01-11 06:51:04,166 | INFO     | [monitor] control thread has ended
[2026-01-11 06:51:10] 2026-01-11 06:51:09,138 | INFO     | all workflow threads have been joined
[2026-01-11 06:51:10] 2026-01-11 06:51:09,138 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:51:10] 2026-01-11 06:51:09,139 | INFO     | traces error code: 0
[2026-01-11 06:51:10] 2026-01-11 06:51:09,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:51:10] 2026-01-11 06:51:09,548 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:51:10] 2026-01-11 06:51:09,566 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:51:10] 2026-01-11 06:51:09,574 [wrapper] pilotpid: 1143787
[2026-01-11 06:51:10] 2026-01-11 06:51:09,586 [wrapper] Pilot exit status: 0
[2026-01-11 06:51:10] 2026-01-11 06:51:09,647 [wrapper] pandaids: 6963189507
[2026-01-11 06:51:10] 2026-01-11 06:51:09,849 [wrapper] cleanup supervisor_pilot 1482382 1143788
[2026-01-11 06:51:10] 2026-01-11 06:51:09,862 [wrapper] Test setup, not cleaning
[2026-01-11 06:51:10] 2026-01-11 06:51:09,873 [wrapper] apfmon messages muted
[2026-01-11 06:51:10] 2026-01-11 06:51:09,885 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:51:10] 2026-01-11 06:51:09,894 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:51:10]  *** Error codes and diagnostics ***
[2026-01-11 06:51:10]     "exeErrorCode": 0,
[2026-01-11 06:51:10]     "exeErrorDiag": "",
[2026-01-11 06:51:10]     "pilotErrorCode": 0,
[2026-01-11 06:51:10]     "pilotErrorDiag": "",
[2026-01-11 06:51:10]  *** Listing of results directory ***
[2026-01-11 06:51:10] total 437700
[2026-01-11 06:51:10] -rw-r--r-- 1 boinc boinc      5112 Jan  9 04:21 queuedata.json
[2026-01-11 06:51:10] -rw-r--r-- 1 boinc boinc    579449 Jan  9 04:21 pilot3.tar.gz
[2026-01-11 06:51:10] -rwx------ 1 boinc boinc     36322 Jan  9 04:22 runpilot2-wrapper.sh
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc       100 Jan 11 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:51:10] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 04:03 run_atlas
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc       105 Jan 11 04:03 job.xml
[2026-01-11 06:51:10] -rw-r--r-- 2 boinc boinc 223725975 Jan 11 04:03 EVNT.47898824._001474.pool.root.1
[2026-01-11 06:51:10] -rw-r--r-- 2 boinc boinc     15847 Jan 11 04:03 start_atlas.sh
[2026-01-11 06:51:10] drwxrwx--x 2 boinc boinc      4096 Jan 11 04:03 shared
[2026-01-11 06:51:10] -rw-r--r-- 2 boinc boinc    592401 Jan 11 04:03 input.tar.gz
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc         0 Jan 11 04:03 boinc_setup_complete
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc      7052 Jan 11 04:03 init_data.xml
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc         0 Jan 11 04:03 boinc_lockfile
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc      2519 Jan 11 04:03 pandaJob.out
[2026-01-11 06:51:10] -rw------- 1 boinc boinc    989548 Jan 11 04:03 agis_schedconf.cvmfs.json
[2026-01-11 06:51:10] -rw------- 1 boinc boinc   1516240 Jan 11 04:03 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:51:10] drwx------ 5 boinc boinc      4096 Jan 11 04:03 pilot3
[2026-01-11 06:51:10] -rw------- 1 boinc boinc 216933920 Jan 11 06:48 HITS.47898826._038376.pool.root.1
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc       530 Jan 11 06:48 boinc_task_state.xml
[2026-01-11 06:51:10] -rw------- 1 boinc boinc      1022 Jan 11 06:49 memory_monitor_summary.json
[2026-01-11 06:51:10] -rw------- 1 boinc boinc    445812 Jan 11 06:49 log.47898826._038376.job.log.tgz.1
[2026-01-11 06:51:10] -rw------- 1 boinc boinc        95 Jan 11 06:50 pilot_heartbeat.json
[2026-01-11 06:51:10] -rw------- 1 boinc boinc      7728 Jan 11 06:50 heartbeat.json
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc        28 Jan 11 06:51 wrapper_checkpoint.txt
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc      8192 Jan 11 06:51 boinc_mmap_file
[2026-01-11 06:51:10] -rw------- 1 boinc boinc      4920 Jan 11 06:51 pilotlog.txt
[2026-01-11 06:51:10] -rw------- 1 boinc boinc   1369861 Jan 11 06:51 log.47898826._038376.job.log.1
[2026-01-11 06:51:10] -rw------- 1 boinc boinc       357 Jan 11 06:51 output.list
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc       620 Jan 11 06:51 runtime_log
[2026-01-11 06:51:10] -rw------- 1 boinc boinc   1832960 Jan 11 06:51 result.tar.gz
[2026-01-11 06:51:10] -rw------- 1 boinc boinc       655 Jan 11 06:51 vlFODmQCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmY9lKDm1gc5Go.diag
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc      9168 Jan 11 06:51 runtime_log.err
[2026-01-11 06:51:10] -rw-rw-r-- 1 boinc boinc     20851 Jan 11 06:51 stderr.txt
[2026-01-11 06:51:10] HITS file was successfully produced:
[2026-01-11 06:51:10] -rw------- 1 boinc boinc 216933920 Jan 11 06:48 shared/HITS.pool.root.1
[2026-01-11 06:51:10]  *** Contents of shared directory: ***
[2026-01-11 06:51:10] total 432732
[2026-01-11 06:51:10] -rw-r--r-- 2 boinc boinc 223725975 Jan 11 04:03 ATLAS.root_0
[2026-01-11 06:51:10] -rw-r--r-- 2 boinc boinc     15847 Jan 11 04:03 start_atlas.sh
[2026-01-11 06:51:10] -rw-r--r-- 2 boinc boinc    592401 Jan 11 04:03 input.tar.gz
[2026-01-11 06:51:10] -rw------- 1 boinc boinc 216933920 Jan 11 06:48 HITS.pool.root.1
[2026-01-11 06:51:10] -rw------- 1 boinc boinc   1832960 Jan 11 06:51 result.tar.gz
06:51:11 (1139573): run_atlas exited; CPU time 60661.094749
06:51:11 (1139573): called boinc_finish(0)

</stderr_txt>
]]>

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