Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:37:49 (1435857): wrapper (7.7.26015): starting
14:37:49 (1435857): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:37:49] Arguments: --nthreads 8
[2026-01-09 14:37:49] Threads: 8
[2026-01-09 14:37:49] Checking for CVMFS
[2026-01-09 14:37:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:37:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:37:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:38:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:38:11] 2.13.3.0 11900 93840 414052 154955 3 105 21446638 32935937 25206 16776704 0 396160967 99.480 507935374 32819 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:38:11] CVMFS is ok
[2026-01-09 14:38:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:38:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:38:11] Further information can be found at the LHC@home message board.
[2026-01-09 14:38:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:38:11] Checking for apptainer binary...
[2026-01-09 14:38:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:38:11] Running /usr/bin/apptainer --version
[2026-01-09 14:38:11] apptainer version 1.4.5-2.el9
[2026-01-09 14:38:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:38:12] c6-12-27-1.aglt2.org
[2026-01-09 14:38:12] apptainer works
[2026-01-09 14:38:12] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:38:12] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:38:12] Starting ATLAS job with PandaID=6963192053
[2026-01-09 14:38:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:34:28]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:34:28] 2026-01-10 00:33:45,459 | INFO     | time since job start (17659s) is within the limit (349056.0s)
[2026-01-09 19:34:28] 2026-01-10 00:33:47,484 | INFO     | monitor loop #1014: job 0:6963192053 is in state 'finished'
[2026-01-09 19:34:28] 2026-01-10 00:33:47,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:34:28] 2026-01-10 00:33:47,485 | INFO     | time since job start (17661s) is within the limit (349056.0s)
[2026-01-09 19:34:28] 2026-01-10 00:33:49,511 | INFO     | time since job start (17663s) is within the limit (349056.0s)
[2026-01-09 19:34:28] 2026-01-10 00:33:50,001 | INFO     | monitor loop #1015: job 0:6963192053 is in state 'finished'
[2026-01-09 19:34:28] 2026-01-10 00:33:50,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:34:28] 2026-01-10 00:33:51,527 | INFO     | time since job start (17665s) is within the limit (349056.0s)
[2026-01-09 19:34:28] 2026-01-10 00:33:51,527 | INFO     | 17673s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 19:34:28] 2026-01-10 00:33:52,067 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 19:34:28] 2026-01-10 00:33:52,117 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2710.6631562499992
[2026-01-09 19:34:28] 2026-01-10 00:33:52,223 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963192053/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,224 | INFO     | extracted standard info from prmon json
[2026-01-09 19:34:28] 2026-01-10 00:33:52,224 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:34:28] 2026-01-10 00:33:52,224 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:34:28] 2026-01-10 00:33:52,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:34:28] 2026-01-10 00:33:52,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:34:28] 2026-01-10 00:33:52,252 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:34:28] 2026-01-10 00:33:52,252 | INFO     | sum of square deviations: 7330119362.926817
[2026-01-09 19:34:28] 2026-01-10 00:33:52,263 | INFO     | sum of deviations: 20618570910.39023
[2026-01-09 19:34:28] 2026-01-10 00:33:52,264 | INFO     | mean x: 1767996424.2439024
[2026-01-09 19:34:28] 2026-01-10 00:33:52,264 | INFO     | mean y: 2514228.3658536584
[2026-01-09 19:34:28] 2026-01-10 00:33:52,264 | INFO     | intersect: -4970605285.479807
[2026-01-09 19:34:28] 2026-01-10 00:33:52,264 | INFO     | chi2: 3.383325576122963
[2026-01-09 19:34:28] 2026-01-10 00:33:52,265 | INFO     | sum of square deviations: 6953659235.12412
[2026-01-09 19:34:28] 2026-01-10 00:33:52,279 | INFO     | sum of deviations: 38244563544.08153
[2026-01-09 19:34:28] 2026-01-10 00:33:52,279 | INFO     | mean x: 1767996271.748227
[2026-01-09 19:34:28] 2026-01-10 00:33:52,279 | INFO     | mean y: 2521265.6631205673
[2026-01-09 19:34:28] 2026-01-10 00:33:52,279 | INFO     | intersect: -9721315274.82093
[2026-01-09 19:34:28] 2026-01-10 00:33:52,280 | INFO     | chi2: 2.7106622508553286
[2026-01-09 19:34:28] 2026-01-10 00:33:52,280 | INFO     | current chi2=2.7106622508553286 (change=19.881720222694497 %)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,280 | INFO     | right removable region: 281
[2026-01-09 19:34:28] 2026-01-10 00:33:52,281 | INFO     | sum of square deviations: 6953616535.124121
[2026-01-09 19:34:28] 2026-01-10 00:33:52,292 | INFO     | sum of deviations: -47228568421.51773
[2026-01-09 19:34:28] 2026-01-10 00:33:52,292 | INFO     | mean x: 1767996576.748227
[2026-01-09 19:34:28] 2026-01-10 00:33:52,292 | INFO     | mean y: 2541604.9645390073
[2026-01-09 19:34:28] 2026-01-10 00:33:52,292 | INFO     | intersect: 12010673901.61732
[2026-01-09 19:34:28] 2026-01-10 00:33:52,293 | INFO     | chi2: 1.0731000709180512
[2026-01-09 19:34:28] 2026-01-10 00:33:52,293 | INFO     | current chi2=1.0731000709180512 (change=68.28268380402979 %)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,293 | INFO     | sum of square deviations: 6590247311.812236
[2026-01-09 19:34:28] 2026-01-10 00:33:52,314 | INFO     | sum of deviations: -59463270223.98915
[2026-01-09 19:34:28] 2026-01-10 00:33:52,314 | INFO     | mean x: 1767996729.2490976
[2026-01-09 19:34:28] 2026-01-10 00:33:52,314 | INFO     | mean y: 2546725.0433213
[2026-01-09 19:34:28] 2026-01-10 00:33:52,314 | INFO     | intersect: 15955038686.617128
[2026-01-09 19:34:28] 2026-01-10 00:33:52,315 | INFO     | chi2: 0.9780684746880949
[2026-01-09 19:34:28] 2026-01-10 00:33:52,315 | INFO     | current chi2=0.9780684746880949 (change=8.855800013940499 %)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,315 | INFO     | left removable region: 20
[2026-01-09 19:34:28] 2026-01-10 00:33:52,315 | INFO     | sum of square deviations: 5512963151.79307
[2026-01-09 19:34:28] 2026-01-10 00:33:52,341 | INFO     | sum of deviations: -34194588626.89658
[2026-01-09 19:34:28] 2026-01-10 00:33:52,342 | INFO     | mean x: 1767996851.2413793
[2026-01-09 19:34:28] 2026-01-10 00:33:52,342 | INFO     | mean y: 2551484.268199234
[2026-01-09 19:34:28] 2026-01-10 00:33:52,342 | INFO     | intersect: 10968691354.472916
[2026-01-09 19:34:28] 2026-01-10 00:33:52,344 | INFO     | chi2: 0.24470037769663172
[2026-01-09 19:34:28] 2026-01-10 00:33:52,344 | INFO     | current memory leak: -6.20 B/s (using 261 data points, chi2=0.24)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,344 | INFO     | could have reported an average CPU frequency of 2706 MHz (13 samples)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,345 | INFO     | ..............................
[2026-01-09 19:34:28] 2026-01-10 00:33:52,345 | INFO     | . Timing measurements:
[2026-01-09 19:34:28] 2026-01-10 00:33:52,345 | INFO     | . get job = 0 s
[2026-01-09 19:34:28] 2026-01-10 00:33:52,345 | INFO     | . initial setup = 7 s
[2026-01-09 19:34:28] 2026-01-10 00:33:52,364 | INFO     | . payload setup = 42 s
[2026-01-09 19:34:28] 2026-01-10 00:33:52,364 | INFO     | . stage-in = 0 s
[2026-01-09 19:34:28] 2026-01-10 00:33:52,364 | INFO     | . payload execution = 17535 s
[2026-01-09 19:34:28] 2026-01-10 00:33:52,364 | INFO     | . stage-out = 4 s
[2026-01-09 19:34:28] 2026-01-10 00:33:52,364 | INFO     | . log creation = 0 s
[2026-01-09 19:34:28] 2026-01-10 00:33:52,364 | INFO     | ..............................
[2026-01-09 19:34:28] 2026-01-10 00:33:52,665 | INFO     | 
[2026-01-09 19:34:28] 2026-01-10 00:33:52,665 | INFO     | job summary report
[2026-01-09 19:34:28] 2026-01-10 00:33:52,665 | INFO     | --------------------------------------------------
[2026-01-09 19:34:28] 2026-01-10 00:33:52,665 | INFO     | PanDA job id: 6963192053
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | task id: 47898826
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | errors: (none)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | pilot state: finished 
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | transexitcode: 0
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | exeerrorcode: 0
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | exeerrordiag: 
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | exitcode: 0
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | exitmsg: OK
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | cpuconsumptiontime: 59914 s
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | nevents: 400
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | neventsw: 0
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | pid: 1451398
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | pgrp: 1451398
[2026-01-09 19:34:28] 2026-01-10 00:33:52,666 | INFO     | corecount: 8
[2026-01-09 19:34:28] 2026-01-10 00:33:52,667 | INFO     | event service: False
[2026-01-09 19:34:28] 2026-01-10 00:33:52,667 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 32: 2284373, 35: 2284529, 17582: 2316430, 17588: 2325428, 17589: 2325484, 17603: 2325678}
[2026-01-09 19:34:28] 2026-01-10 00:33:52,667 | INFO     | --------------------------------------------------
[2026-01-09 19:34:28] 2026-01-10 00:33:52,667 | INFO     | 
[2026-01-09 19:34:28] 2026-01-10 00:33:52,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 19:34:28] 2026-01-10 00:33:52,705 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,706 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,706 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,706 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,707 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:34:28] 2026-01-10 00:33:52,708 | INFO     | job 6963192053 has completed (purged errors)
[2026-01-09 19:34:28] 2026-01-10 00:33:52,708 | INFO     | overall cleanup function is called
[2026-01-09 19:34:28] 2026-01-10 00:33:53,717 | INFO     | --- collectZombieJob: --- 10, [1451398]
[2026-01-09 19:34:28] 2026-01-10 00:33:53,717 | INFO     | zombie collector waiting for pid 1451398
[2026-01-09 19:34:28] 2026-01-10 00:33:53,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:34:28] 2026-01-10 00:33:53,718 | INFO     | collected zombie processes
[2026-01-09 19:34:28] 2026-01-10 00:33:53,718 | INFO     | will attempt to kill all subprocesses of pid=1451398
[2026-01-09 19:34:28] 2026-01-10 00:33:54,712 | INFO     | process IDs to be killed: [1451398] (in reverse order)
[2026-01-09 19:34:28] 2026-01-10 00:33:54,880 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:34:28] 2026-01-10 00:33:54,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:34:28] 2026-01-10 00:33:54,938 | INFO     | did not find any defunct processes belonging to 1451398
[2026-01-09 19:34:28] 2026-01-10 00:33:55,006 | INFO     | did not find any defunct processes belonging to 1451398
[2026-01-09 19:34:28] 2026-01-10 00:33:55,006 | INFO     | ready for new job
[2026-01-09 19:34:28] 2026-01-10 00:33:55,006 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:34:28] 2026-01-10 00:33:55,008 | INFO     | ***************************************
[2026-01-09 19:34:28] 2026-01-10 00:33:55,008 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:34:28] 2026-01-10 00:33:55,008 | INFO     | ***************************************
[2026-01-09 19:34:28] 2026-01-10 00:33:55,008 | INFO     | 
[2026-01-09 19:34:28] 2026-01-10 00:33:55,030 | INFO     | architecture information:
[2026-01-09 19:34:28] 2026-01-10 00:33:55,030 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:34:28] 2026-01-10 00:33:55,085 | INFO     | cat /etc/os-release:
[2026-01-09 19:34:28] NAME="CentOS Linux"
[2026-01-09 19:34:28] VERSION="7 (Core)"
[2026-01-09 19:34:28] ID="centos"
[2026-01-09 19:34:28] ID_LIKE="rhel fedora"
[2026-01-09 19:34:28] VERSION_ID="7"
[2026-01-09 19:34:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:34:28] ANSI_COLOR="0;31"
[2026-01-09 19:34:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:34:28] HOME_URL="https://www.centos.org/"
[2026-01-09 19:34:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:34:28] 
[2026-01-09 19:34:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:34:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:34:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:34:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:34:28] 
[2026-01-09 19:34:28] 2026-01-10 00:33:55,086 | INFO     | ***************************************
[2026-01-09 19:34:28] 2026-01-10 00:33:55,589 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 19:34:28] 2026-01-10 00:33:55,640 | INFO     | sufficient remaining disk space (93076848640 B)
[2026-01-09 19:34:28] 2026-01-10 00:33:55,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:34:28] 2026-01-10 00:33:55,641 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:34:28] 2026-01-10 00:33:55,641 | INFO     | update_server=False
[2026-01-09 19:34:28] 2026-01-10 00:33:55,641 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:34:28] 2026-01-10 00:33:55,789 | INFO     | all data control threads have been joined
[2026-01-09 19:34:28] 2026-01-10 00:33:56,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:34:28] 2026-01-10 00:33:56,069 | INFO     | aborting loop
[2026-01-09 19:34:28] 2026-01-10 00:33:56,140 | INFO     | all job control threads have been joined
[2026-01-09 19:34:28] 2026-01-10 00:33:56,414 | INFO     | all payload control threads have been joined
[2026-01-09 19:34:28] 2026-01-10 00:33:56,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:34:28] 2026-01-10 00:33:56,647 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:56,728 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:56,810 | INFO     | [data] control thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:56,994 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:57,058 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:57,081 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:57,109 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:57,146 | INFO     | [job] control thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:57,421 | INFO     | [payload] control thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:57,636 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:57,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:34:28] 2026-01-10 00:33:58,057 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:58,058 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:58,109 | INFO     | [job] validate thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:58,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:34:28] 2026-01-10 00:33:58,207 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:34:28] 2026-01-10 00:33:58,496 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:33:58,669 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:34:02,166 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:34:28] 2026-01-10 00:34:02,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143625361216)>', '<ExcThread(monitor, started 140142811531008)>']
[2026-01-09 19:34:28] 2026-01-10 00:34:07,385 | INFO     | all workflow threads have been joined
[2026-01-09 19:34:28] 2026-01-10 00:34:07,385 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:34:28] 2026-01-10 00:34:07,386 | INFO     | traces error code: 0
[2026-01-09 19:34:28] 2026-01-10 00:34:07,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:34:28] 2026-01-10 00:34:27,707 | INFO     | PID=1441436 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:34:28] 2026-01-10 00:34:27,708 | INFO     | .. there are 24 such processes running
[2026-01-09 19:34:28] 2026-01-10 00:34:27,708 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:34:28] 2026-01-10 00:34:27,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:34:28] 2026-01-10 00:34:27,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:34:28] 2026-01-10 00:34:27,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:34:28] 2026-01-10 00:34:27,715 | INFO     | [monitor] control thread has ended
[2026-01-09 19:34:28] 2026-01-10 00:34:28,078 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:34:28] 2026-01-10 00:34:28,093 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:34:28] 2026-01-10 00:34:28,109 [wrapper] pilotpid: 1441436
[2026-01-09 19:34:28] 2026-01-10 00:34:28,136 [wrapper] Pilot exit status: 0
[2026-01-09 19:34:28] 2026-01-10 00:34:28,209 [wrapper] pandaids: 6963192053
[2026-01-09 19:34:28] 2026-01-10 00:34:28,340 [wrapper] cleanup supervisor_pilot 2368111 1441437
[2026-01-09 19:34:28] 2026-01-10 00:34:28,353 [wrapper] Test setup, not cleaning
[2026-01-09 19:34:28] 2026-01-10 00:34:28,357 [wrapper] apfmon messages muted
[2026-01-09 19:34:28] 2026-01-10 00:34:28,359 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:34:28] 2026-01-10 00:34:28,362 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:34:28]  *** Error codes and diagnostics ***
[2026-01-09 19:34:28]     "exeErrorCode": 0,
[2026-01-09 19:34:28]     "exeErrorDiag": "",
[2026-01-09 19:34:28]     "pilotErrorCode": 0,
[2026-01-09 19:34:28]     "pilotErrorDiag": "",
[2026-01-09 19:34:28]  *** Listing of results directory ***
[2026-01-09 19:34:28] total 442748
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 19:34:28] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:34:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:37 run_atlas
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:37 job.xml
[2026-01-09 19:34:28] -rw-r--r--. 2 boincer umatlas 223593338 Jan  9 14:37 EVNT.47898824._001495.pool.root.1
[2026-01-09 19:34:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:37 start_atlas.sh
[2026-01-09 19:34:28] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:37 shared
[2026-01-09 19:34:28] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 14:37 input.tar.gz
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:37 boinc_lockfile
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 14:38 pandaJob.out
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas        57 Jan  9 14:38 setup.sh.local
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas    989364 Jan  9 14:39 agis_schedconf.cvmfs.json
[2026-01-09 19:34:28] drwx------. 5 boincer umatlas      4096 Jan  9 14:39 pilot3
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas 220622464 Jan  9 19:31 HITS.47898826._038921.pool.root.1
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas       531 Jan  9 19:31 boinc_task_state.xml
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas      6879 Jan  9 19:31 init_data.xml
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas      1043 Jan  9 19:33 memory_monitor_summary.json
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:33 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas    498133 Jan  9 19:33 log.47898826._038921.job.log.tgz.1
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas        95 Jan  9 19:33 pilot_heartbeat.json
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas      7832 Jan  9 19:33 heartbeat.json
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas       823 Jan  9 19:34 pilotlog.txt
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:34 boinc_mmap_file
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:34 wrapper_checkpoint.txt
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas   2128221 Jan  9 19:34 log.47898826._038921.job.log.1
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas       357 Jan  9 19:34 output.list
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:34 runtime_log
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas   2641920 Jan  9 19:34 result.tar.gz
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas      9353 Jan  9 19:34 runtime_log.err
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas       658 Jan  9 19:34 hdALDmSCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUxgKDmH6iIOm.diag
[2026-01-09 19:34:28] -rw-r--r--. 1 boincer umatlas     21452 Jan  9 19:34 stderr.txt
[2026-01-09 19:34:28] HITS file was successfully produced:
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas 220622464 Jan  9 19:31 shared/HITS.pool.root.1
[2026-01-09 19:34:28]  *** Contents of shared directory: ***
[2026-01-09 19:34:28] total 436988
[2026-01-09 19:34:28] -rw-r--r--. 2 boincer umatlas 223593338 Jan  9 14:37 ATLAS.root_0
[2026-01-09 19:34:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:37 start_atlas.sh
[2026-01-09 19:34:28] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 14:37 input.tar.gz
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas 220622464 Jan  9 19:31 HITS.pool.root.1
[2026-01-09 19:34:28] -rw-------. 1 boincer umatlas   2641920 Jan  9 19:34 result.tar.gz
19:34:29 (1435857): run_atlas exited; CPU time 60633.003231
19:34:29 (1435857): called boinc_finish(0)

</stderr_txt>
]]>

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