Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:43:52 (16329): wrapper (7.7.26015): starting
13:43:52 (16329): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:43:52] Arguments: --nthreads 8
[2026-01-09 13:43:52] Threads: 8
[2026-01-09 13:43:52] Checking for CVMFS
[2026-01-09 13:43:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:43:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:43:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:43:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:43:52] 2.11.2.0 21766 181434 138500 154953 3 3 16930890 18432000 1833 130560 0 122423202 99.980 6970476 29768 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:43:52] CVMFS is ok
[2026-01-09 13:43:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:43:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:43:52] Further information can be found at the LHC@home message board.
[2026-01-09 13:43:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:43:52] Checking for apptainer binary...
[2026-01-09 13:43:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:43:52] Running /usr/bin/apptainer --version
[2026-01-09 13:43:52] apptainer version 1.3.2-1.el7
[2026-01-09 13:43:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:43:53] c-206-18.aglt2.org
[2026-01-09 13:43:53] apptainer works
[2026-01-09 13:43:53] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:43:53] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:43:53] Starting ATLAS job with PandaID=6963189652
[2026-01-09 13:43:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:03:34]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:03:34] 2026-01-09 23:03:01,394 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:03:34] 2026-01-09 23:03:01,442 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2516.75
[2026-01-09 18:03:34] 2026-01-09 23:03:01,446 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963189652/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,447 | INFO     | extracted standard info from prmon json
[2026-01-09 18:03:34] 2026-01-09 23:03:01,447 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:03:34] 2026-01-09 23:03:01,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:03:34] 2026-01-09 23:03:01,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:03:34] 2026-01-09 23:03:01,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:03:34] 2026-01-09 23:03:01,456 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:03:34] 2026-01-09 23:03:01,456 | INFO     | sum of square deviations: 5141528960.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,459 | INFO     | sum of deviations: 6934548015.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,459 | INFO     | mean x: 1767992013.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,459 | INFO     | mean y: 2484159.3529411764
[2026-01-09 18:03:34] 2026-01-09 23:03:01,459 | INFO     | intersect: -2382064405.804806
[2026-01-09 18:03:34] 2026-01-09 23:03:01,460 | INFO     | chi2: 1.914326212838008
[2026-01-09 18:03:34] 2026-01-09 23:03:01,460 | INFO     | sum of square deviations: 4844974562.5
[2026-01-09 18:03:34] 2026-01-09 23:03:01,463 | INFO     | sum of deviations: 23415083172.499996
[2026-01-09 18:03:34] 2026-01-09 23:03:01,463 | INFO     | mean x: 1767991860.5
[2026-01-09 18:03:34] 2026-01-09 23:03:01,464 | INFO     | mean y: 2492496.516
[2026-01-09 18:03:34] 2026-01-09 23:03:01,464 | INFO     | intersect: -8541964430.529118
[2026-01-09 18:03:34] 2026-01-09 23:03:01,464 | INFO     | chi2: 1.141812057732429
[2026-01-09 18:03:34] 2026-01-09 23:03:01,464 | INFO     | current chi2=1.141812057732429 (change=40.35436332245166 %)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,465 | INFO     | sum of square deviations: 4560048290.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,467 | INFO     | sum of deviations: 22755576518.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,468 | INFO     | mean x: 1767991708.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,468 | INFO     | mean y: 2492143.506122449
[2026-01-09 18:03:34] 2026-01-09 23:03:01,468 | INFO     | intersect: -8820149205.009842
[2026-01-09 18:03:34] 2026-01-09 23:03:01,469 | INFO     | chi2: 1.1422145546106395
[2026-01-09 18:03:34] 2026-01-09 23:03:01,469 | INFO     | current chi2=1.1422145546106395 (change=-0.03525071183866307 %)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,469 | INFO     | right removable region: 244
[2026-01-09 18:03:34] 2026-01-09 23:03:01,469 | INFO     | sum of square deviations: 4844974562.5
[2026-01-09 18:03:34] 2026-01-09 23:03:01,472 | INFO     | sum of deviations: -21376676550.5
[2026-01-09 18:03:34] 2026-01-09 23:03:01,472 | INFO     | mean x: 1767992165.5
[2026-01-09 18:03:34] 2026-01-09 23:03:01,472 | INFO     | mean y: 2498551.788
[2026-01-09 18:03:34] 2026-01-09 23:03:01,472 | INFO     | intersect: 7803116734.231051
[2026-01-09 18:03:34] 2026-01-09 23:03:01,473 | INFO     | chi2: 0.8203205038298729
[2026-01-09 18:03:34] 2026-01-09 23:03:01,473 | INFO     | current chi2=0.8203205038298729 (change=57.14834293504557 %)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,474 | INFO     | sum of square deviations: 4560048290.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,476 | INFO     | sum of deviations: -17425360589.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,476 | INFO     | mean x: 1767992318.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,476 | INFO     | mean y: 2496442.5306122447
[2026-01-09 18:03:34] 2026-01-09 23:03:01,477 | INFO     | intersect: 6758544120.20377
[2026-01-09 18:03:34] 2026-01-09 23:03:01,477 | INFO     | chi2: 0.8128834193147387
[2026-01-09 18:03:34] 2026-01-09 23:03:01,477 | INFO     | current chi2=0.8128834193147387 (change=0.9066071712717455 %)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,478 | INFO     | left removable region: 20
[2026-01-09 18:03:34] 2026-01-09 23:03:01,478 | INFO     | sum of square deviations: 3485088600.0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,480 | INFO     | sum of deviations: 5762387295.5
[2026-01-09 18:03:34] 2026-01-09 23:03:01,480 | INFO     | mean x: 1767992287.5
[2026-01-09 18:03:34] 2026-01-09 23:03:01,480 | INFO     | mean y: 2500833.6741071427
[2026-01-09 18:03:34] 2026-01-09 23:03:01,481 | INFO     | intersect: -2920769552.0578322
[2026-01-09 18:03:34] 2026-01-09 23:03:01,481 | INFO     | chi2: 0.008759917172717364
[2026-01-09 18:03:34] 2026-01-09 23:03:01,482 | INFO     | current memory leak: 1.65 B/s (using 224 data points, chi2=0.01)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,482 | INFO     | could have reported an average CPU frequency of 2509 MHz (12 samples)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,482 | INFO     | ..............................
[2026-01-09 18:03:34] 2026-01-09 23:03:01,482 | INFO     | . Timing measurements:
[2026-01-09 18:03:34] 2026-01-09 23:03:01,483 | INFO     | . get job = 0 s
[2026-01-09 18:03:34] 2026-01-09 23:03:01,483 | INFO     | . initial setup = 2 s
[2026-01-09 18:03:34] 2026-01-09 23:03:01,483 | INFO     | . payload setup = 4 s
[2026-01-09 18:03:34] 2026-01-09 23:03:01,483 | INFO     | . stage-in = 0 s
[2026-01-09 18:03:34] 2026-01-09 23:03:01,483 | INFO     | . payload execution = 15506 s
[2026-01-09 18:03:34] 2026-01-09 23:03:01,483 | INFO     | . stage-out = 2 s
[2026-01-09 18:03:34] 2026-01-09 23:03:01,484 | INFO     | . log creation = 0 s
[2026-01-09 18:03:34] 2026-01-09 23:03:01,484 | INFO     | ..............................
[2026-01-09 18:03:34] 2026-01-09 23:03:01,634 | INFO     | time since job start (15538s) is within the limit (349056.0s)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,644 | INFO     | 
[2026-01-09 18:03:34] 2026-01-09 23:03:01,644 | INFO     | job summary report
[2026-01-09 18:03:34] 2026-01-09 23:03:01,644 | INFO     | --------------------------------------------------
[2026-01-09 18:03:34] 2026-01-09 23:03:01,644 | INFO     | PanDA job id: 6963189652
[2026-01-09 18:03:34] 2026-01-09 23:03:01,644 | INFO     | task id: 47898826
[2026-01-09 18:03:34] 2026-01-09 23:03:01,645 | INFO     | errors: (none)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,645 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:03:34] 2026-01-09 23:03:01,645 | INFO     | pilot state: finished 
[2026-01-09 18:03:34] 2026-01-09 23:03:01,645 | INFO     | transexitcode: 0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,645 | INFO     | exeerrorcode: 0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,645 | INFO     | exeerrordiag: 
[2026-01-09 18:03:34] 2026-01-09 23:03:01,646 | INFO     | exitcode: 0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,646 | INFO     | exitmsg: OK
[2026-01-09 18:03:34] 2026-01-09 23:03:01,646 | INFO     | cpuconsumptiontime: 118813 s
[2026-01-09 18:03:34] 2026-01-09 23:03:01,646 | INFO     | nevents: 400
[2026-01-09 18:03:34] 2026-01-09 23:03:01,646 | INFO     | neventsw: 0
[2026-01-09 18:03:34] 2026-01-09 23:03:01,646 | INFO     | pid: 26517
[2026-01-09 18:03:34] 2026-01-09 23:03:01,647 | INFO     | pgrp: 26517
[2026-01-09 18:03:34] 2026-01-09 23:03:01,647 | INFO     | corecount: 8
[2026-01-09 18:03:34] 2026-01-09 23:03:01,647 | INFO     | event service: False
[2026-01-09 18:03:34] 2026-01-09 23:03:01,647 | INFO     | sizes: {0: 2283971, 3: 2284233, 11: 2284261, 15514: 2315446, 15517: 2324500, 15524: 2324638}
[2026-01-09 18:03:34] 2026-01-09 23:03:01,647 | INFO     | --------------------------------------------------
[2026-01-09 18:03:34] 2026-01-09 23:03:01,647 | INFO     | 
[2026-01-09 18:03:34] 2026-01-09 23:03:01,648 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 18:03:34] 2026-01-09 23:03:01,666 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,667 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,667 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,667 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,670 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,670 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:03:34] 2026-01-09 23:03:01,670 | INFO     | job 6963189652 has completed (purged errors)
[2026-01-09 18:03:34] 2026-01-09 23:03:01,670 | INFO     | overall cleanup function is called
[2026-01-09 18:03:34] 2026-01-09 23:03:02,679 | INFO     | --- collectZombieJob: --- 10, [26517]
[2026-01-09 18:03:34] 2026-01-09 23:03:02,679 | INFO     | zombie collector waiting for pid 26517
[2026-01-09 18:03:34] 2026-01-09 23:03:02,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:03:34] 2026-01-09 23:03:02,680 | INFO     | collected zombie processes
[2026-01-09 18:03:34] 2026-01-09 23:03:02,680 | INFO     | will attempt to kill all subprocesses of pid=26517
[2026-01-09 18:03:34] 2026-01-09 23:03:02,853 | INFO     | process IDs to be killed: [26517] (in reverse order)
[2026-01-09 18:03:34] 2026-01-09 23:03:02,896 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:03:34] 2026-01-09 23:03:02,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:03:34] 2026-01-09 23:03:02,901 | INFO     | did not find any defunct processes belonging to 26517
[2026-01-09 18:03:34] 2026-01-09 23:03:02,906 | INFO     | did not find any defunct processes belonging to 26517
[2026-01-09 18:03:34] 2026-01-09 23:03:02,906 | INFO     | ready for new job
[2026-01-09 18:03:34] 2026-01-09 23:03:02,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:03:34] 2026-01-09 23:03:02,909 | INFO     | ***************************************
[2026-01-09 18:03:34] 2026-01-09 23:03:02,909 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:03:34] 2026-01-09 23:03:02,909 | INFO     | ***************************************
[2026-01-09 18:03:34] 2026-01-09 23:03:02,909 | INFO     | 
[2026-01-09 18:03:34] 2026-01-09 23:03:02,910 | INFO     | architecture information:
[2026-01-09 18:03:34] 2026-01-09 23:03:02,911 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:03:34] 2026-01-09 23:03:02,923 | INFO     | cat /etc/os-release:
[2026-01-09 18:03:34] NAME="CentOS Linux"
[2026-01-09 18:03:34] VERSION="7 (Core)"
[2026-01-09 18:03:34] ID="centos"
[2026-01-09 18:03:34] ID_LIKE="rhel fedora"
[2026-01-09 18:03:34] VERSION_ID="7"
[2026-01-09 18:03:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:03:34] ANSI_COLOR="0;31"
[2026-01-09 18:03:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:03:34] HOME_URL="https://www.centos.org/"
[2026-01-09 18:03:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:03:34] 
[2026-01-09 18:03:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:03:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:03:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:03:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:03:34] 
[2026-01-09 18:03:34] 2026-01-09 23:03:02,924 | INFO     | ***************************************
[2026-01-09 18:03:34] 2026-01-09 23:03:03,426 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 18:03:34] 2026-01-09 23:03:03,481 | INFO     | sufficient remaining disk space (28085059584 B)
[2026-01-09 18:03:34] 2026-01-09 23:03:03,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:03:34] 2026-01-09 23:03:03,481 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:03:34] 2026-01-09 23:03:03,481 | INFO     | update_server=False
[2026-01-09 18:03:34] 2026-01-09 23:03:03,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:03:34] 2026-01-09 23:03:03,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:03:34] 2026-01-09 23:03:03,482 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 18:03:34] 2026-01-09 23:03:03,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:03:34] 2026-01-09 23:03:03,482 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:03:34] 2026-01-09 23:03:03,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:03:34] 2026-01-09 23:03:03,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:03:34] 2026-01-09 23:03:03,722 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:03:34] 2026-01-09 23:03:03,722 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:03:34] 2026-01-09 23:03:03,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:03:34] 2026-01-09 23:03:03,723 | INFO     | will abort loop
[2026-01-09 18:03:34] 2026-01-09 23:03:03,723 | INFO     | all data control threads have been joined
[2026-01-09 18:03:34] 2026-01-09 23:03:03,844 | INFO     | all payload control threads have been joined
[2026-01-09 18:03:34] 2026-01-09 23:03:04,484 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:04,486 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:04,507 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:04,559 | INFO     | all job control threads have been joined
[2026-01-09 18:03:34] 2026-01-09 23:03:04,728 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:04,729 | INFO     | [data] control thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:04,849 | INFO     | [payload] control thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:04,897 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:04,939 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:04,990 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:05,173 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:05,489 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:05,564 | INFO     | [job] control thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:05,591 | INFO     | [job] validate thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:05,591 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:05,639 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:05,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:03:34] 2026-01-09 23:03:09,695 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:03:34] 2026-01-09 23:03:28,327 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:03:34] 2026-01-09 23:03:28,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615772997440)>', '<ExcThread(monitor, started 140615182432000)>']
[2026-01-09 18:03:34] 2026-01-09 23:03:29,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:03:34] 2026-01-09 23:03:29,610 | INFO     | [monitor] control thread has ended
[2026-01-09 18:03:34] 2026-01-09 23:03:33,860 | INFO     | all workflow threads have been joined
[2026-01-09 18:03:34] 2026-01-09 23:03:33,860 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:03:34] 2026-01-09 23:03:33,860 | INFO     | traces error code: 0
[2026-01-09 18:03:34] 2026-01-09 23:03:33,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:03:34] 2026-01-09 23:03:33,970 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:03:34] 2026-01-09 23:03:33,982 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:03:34] 2026-01-09 23:03:33,985 [wrapper] pilotpid: 20031
[2026-01-09 18:03:34] 2026-01-09 23:03:33,987 [wrapper] Pilot exit status: 0
[2026-01-09 18:03:34] 2026-01-09 23:03:33,997 [wrapper] pandaids: 6963189652
[2026-01-09 18:03:34] 2026-01-09 23:03:34,035 [wrapper] cleanup supervisor_pilot 16272 20032
[2026-01-09 18:03:34] 2026-01-09 23:03:34,038 [wrapper] Test setup, not cleaning
[2026-01-09 18:03:34] 2026-01-09 23:03:34,040 [wrapper] apfmon messages muted
[2026-01-09 18:03:34] 2026-01-09 23:03:34,042 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:03:34] 2026-01-09 23:03:34,044 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:03:34]  *** Error codes and diagnostics ***
[2026-01-09 18:03:34]     "exeErrorCode": 0,
[2026-01-09 18:03:34]     "exeErrorDiag": "",
[2026-01-09 18:03:34]     "pilotErrorCode": 0,
[2026-01-09 18:03:34]     "pilotErrorDiag": "",
[2026-01-09 18:03:34]  *** Listing of results directory ***
[2026-01-09 18:03:34] total 450180
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 18:03:34] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas       100 Jan  9 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:03:34] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 13:43 run_atlas
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas       105 Jan  9 13:43 job.xml
[2026-01-09 18:03:34] -rw-r--r-- 2 boincer umatlas 226879329 Jan  9 13:43 EVNT.47898824._001479.pool.root.1
[2026-01-09 18:03:34] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 13:43 start_atlas.sh
[2026-01-09 18:03:34] drwxrwx--x 2 boincer umatlas      4096 Jan  9 13:43 shared
[2026-01-09 18:03:34] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 13:43 input.tar.gz
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas         0 Jan  9 13:43 boinc_lockfile
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 13:43 pandaJob.out
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas        57 Jan  9 13:43 setup.sh.local
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas    989372 Jan  9 13:44 agis_schedconf.cvmfs.json
[2026-01-09 18:03:34] drwx------ 5 boincer umatlas      4096 Jan  9 13:44 pilot3
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 18:00 init_data.xml
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas 224879510 Jan  9 18:02 HITS.47898826._038521.pool.root.1
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas       531 Jan  9 18:02 boinc_task_state.xml
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas        95 Jan  9 18:02 pilot_heartbeat.json
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas      1068 Jan  9 18:02 memory_monitor_summary.json
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas   1516240 Jan  9 18:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas    495229 Jan  9 18:02 log.47898826._038521.job.log.tgz.1
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas      7861 Jan  9 18:03 heartbeat.json
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 18:03 boinc_mmap_file
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas        29 Jan  9 18:03 wrapper_checkpoint.txt
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas      4738 Jan  9 18:03 pilotlog.txt
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas   2157830 Jan  9 18:03 log.47898826._038521.job.log.1
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas       357 Jan  9 18:03 output.list
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas       620 Jan  9 18:03 runtime_log
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas   2672640 Jan  9 18:03 result.tar.gz
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 18:03 runtime_log.err
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas       664 Jan  9 18:03 M4sKDmRCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGAmKDmM8YOMm.diag
[2026-01-09 18:03:34] -rw-r--r-- 1 boincer umatlas     20946 Jan  9 18:03 stderr.txt
[2026-01-09 18:03:34] HITS file was successfully produced:
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas 224879510 Jan  9 18:02 shared/HITS.pool.root.1
[2026-01-09 18:03:34]  *** Contents of shared directory: ***
[2026-01-09 18:03:34] total 444392
[2026-01-09 18:03:34] -rw-r--r-- 2 boincer umatlas 226879329 Jan  9 13:43 ATLAS.root_0
[2026-01-09 18:03:34] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 13:43 start_atlas.sh
[2026-01-09 18:03:34] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 13:43 input.tar.gz
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas 224879510 Jan  9 18:02 HITS.pool.root.1
[2026-01-09 18:03:34] -rw------- 1 boincer umatlas   2672640 Jan  9 18:03 result.tar.gz
18:03:35 (16329): run_atlas exited; CPU time 119037.108603
18:03:35 (16329): called boinc_finish(0)

</stderr_txt>
]]>

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