Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:07:28 (3311): wrapper (7.7.26015): starting
20:07:28 (3311): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:07:28] Arguments: --nthreads 8
[2026-01-09 20:07:28] Threads: 8
[2026-01-09 20:07:28] Checking for CVMFS
[2026-01-09 20:07:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:07:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:07:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:07:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:07:29] 2.11.2.0 10325 35813 96272 154954 3 9 15963084 25165824 0 130560 0 15288519 99.833 9712837 3928 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 20:07:29] CVMFS is ok
[2026-01-09 20:07:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:07:29] Checking for apptainer binary...
[2026-01-09 20:07:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:07:29] Running /usr/bin/apptainer --version
[2026-01-09 20:07:29] apptainer version 1.3.2-1.el7
[2026-01-09 20:07:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:07:30] cg-vwn405.simple-grid.lan
[2026-01-09 20:07:30] apptainer works
[2026-01-09 20:07:30] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:07:30] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:07:30] Starting ATLAS job with PandaID=6963189241
[2026-01-09 20:07:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:18:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:18:13] 2026-01-09 22:17:08,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,268 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:18:13] 2026-01-09 22:17:09,270 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 23:18:13] 2026-01-09 22:17:09,272 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963189241/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,272 | INFO     | extracted standard info from prmon json
[2026-01-09 23:18:13] 2026-01-09 22:17:09,272 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:18:13] 2026-01-09 22:17:09,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:18:13] 2026-01-09 22:17:09,273 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:18:13] 2026-01-09 22:17:09,273 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:18:13] 2026-01-09 22:17:09,277 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:18:13] 2026-01-09 22:17:09,278 | INFO     | sum of square deviations: 1931608310.0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,279 | INFO     | sum of deviations: 17989393215.499996
[2026-01-09 23:18:13] 2026-01-09 22:17:09,280 | INFO     | mean x: 1767991275.5
[2026-01-09 23:18:13] 2026-01-09 22:17:09,280 | INFO     | mean y: 2484923.809782609
[2026-01-09 23:18:13] 2026-01-09 22:17:09,280 | INFO     | intersect: -16463115318.168304
[2026-01-09 23:18:13] 2026-01-09 22:17:09,280 | INFO     | chi2: 2.2471333537980067
[2026-01-09 23:18:13] 2026-01-09 22:17:09,281 | INFO     | sum of square deviations: 1778377530.0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,282 | INFO     | sum of deviations: 29624395264.000004
[2026-01-09 23:18:13] 2026-01-09 22:17:09,282 | INFO     | mean x: 1767991123.0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,282 | INFO     | mean y: 2496234.938547486
[2026-01-09 23:18:13] 2026-01-09 22:17:09,283 | INFO     | intersect: -29448881196.149017
[2026-01-09 23:18:13] 2026-01-09 22:17:09,283 | INFO     | chi2: 1.4733035460949553
[2026-01-09 23:18:13] 2026-01-09 22:17:09,283 | INFO     | current chi2=1.4733035460949553 (change=34.436309994471756 %)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,284 | INFO     | sum of square deviations: 1633472487.5
[2026-01-09 23:18:13] 2026-01-09 22:17:09,285 | INFO     | sum of deviations: 28797185060.999996
[2026-01-09 23:18:13] 2026-01-09 22:17:09,285 | INFO     | mean x: 1767990970.5
[2026-01-09 23:18:13] 2026-01-09 22:17:09,285 | INFO     | mean y: 2495364.1494252873
[2026-01-09 23:18:13] 2026-01-09 22:17:09,285 | INFO     | intersect: -31166173562.492344
[2026-01-09 23:18:13] 2026-01-09 22:17:09,286 | INFO     | chi2: 1.47391126439083
[2026-01-09 23:18:13] 2026-01-09 22:17:09,286 | INFO     | current chi2=1.47391126439083 (change=-0.0412486820849365 %)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,286 | INFO     | right removable region: 173
[2026-01-09 23:18:13] 2026-01-09 22:17:09,286 | INFO     | sum of square deviations: 1778377530.0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,287 | INFO     | sum of deviations: -9003505998.999998
[2026-01-09 23:18:13] 2026-01-09 22:17:09,288 | INFO     | mean x: 1767991428.0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,288 | INFO     | mean y: 2511438.8826815644
[2026-01-09 23:18:13] 2026-01-09 22:17:09,288 | INFO     | intersect: 8953435053.048326
[2026-01-09 23:18:13] 2026-01-09 22:17:09,288 | INFO     | chi2: 0.8617006745064322
[2026-01-09 23:18:13] 2026-01-09 22:17:09,288 | INFO     | current chi2=0.8617006745064322 (change=61.653336102638356 %)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,289 | INFO     | sum of square deviations: 1633472487.5
[2026-01-09 23:18:13] 2026-01-09 22:17:09,290 | INFO     | sum of deviations: -14969508091.999998
[2026-01-09 23:18:13] 2026-01-09 22:17:09,290 | INFO     | mean x: 1767991580.5
[2026-01-09 23:18:13] 2026-01-09 22:17:09,290 | INFO     | mean y: 2517739.804597701
[2026-01-09 23:18:13] 2026-01-09 22:17:09,291 | INFO     | intersect: 16204788958.57994
[2026-01-09 23:18:13] 2026-01-09 22:17:09,291 | INFO     | chi2: 0.8009742832722981
[2026-01-09 23:18:13] 2026-01-09 22:17:09,291 | INFO     | current chi2=0.8009742832722981 (change=7.04727210163983 %)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,291 | INFO     | left removable region: 20
[2026-01-09 23:18:13] 2026-01-09 22:17:09,292 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,293 | INFO     | sum of deviations: -4034170584.0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,293 | INFO     | mean x: 1767991550.0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,293 | INFO     | mean y: 2532211.1830065357
[2026-01-09 23:18:13] 2026-01-09 22:17:09,293 | INFO     | intersect: 6424975524.701154
[2026-01-09 23:18:13] 2026-01-09 22:17:09,293 | INFO     | chi2: 0.003696291743103497
[2026-01-09 23:18:13] 2026-01-09 22:17:09,294 | INFO     | current memory leak: -3.63 B/s (using 153 data points, chi2=0.00)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,294 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,295 | INFO     | ..............................
[2026-01-09 23:18:13] 2026-01-09 22:17:09,295 | INFO     | . Timing measurements:
[2026-01-09 23:18:13] 2026-01-09 22:17:09,295 | INFO     | . get job = 0 s
[2026-01-09 23:18:13] 2026-01-09 22:17:09,295 | INFO     | . initial setup = 1 s
[2026-01-09 23:18:13] 2026-01-09 22:17:09,295 | INFO     | . payload setup = 6 s
[2026-01-09 23:18:13] 2026-01-09 22:17:09,295 | INFO     | . stage-in = 0 s
[2026-01-09 23:18:13] 2026-01-09 22:17:09,295 | INFO     | . payload execution = 11230 s
[2026-01-09 23:18:13] 2026-01-09 22:17:09,296 | INFO     | . stage-out = 4 s
[2026-01-09 23:18:13] 2026-01-09 22:17:09,296 | INFO     | . log creation = 1 s
[2026-01-09 23:18:13] 2026-01-09 22:17:09,296 | INFO     | ..............................
[2026-01-09 23:18:13] 2026-01-09 22:17:09,426 | INFO     | 
[2026-01-09 23:18:13] 2026-01-09 22:17:09,426 | INFO     | job summary report
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | --------------------------------------------------
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | PanDA job id: 6963189241
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | task id: 47898826
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | errors: (none)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | pilot state: finished 
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | transexitcode: 0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | exeerrorcode: 0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,427 | INFO     | exeerrordiag: 
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | exitcode: 0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | exitmsg: OK
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | cpuconsumptiontime: 79649 s
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | nevents: 400
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | neventsw: 0
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | pid: 13498
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | pgrp: 13498
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | corecount: 8
[2026-01-09 23:18:13] 2026-01-09 22:17:09,428 | INFO     | event service: False
[2026-01-09 23:18:13] 2026-01-09 22:17:09,429 | INFO     | sizes: {0: 2283971, 1: 2283999, 5: 2284261, 11: 2284317, 11241: 2313216, 11246: 2322214, 11247: 2322398, 11349: 2322656}
[2026-01-09 23:18:13] 2026-01-09 22:17:09,429 | INFO     | --------------------------------------------------
[2026-01-09 23:18:13] 2026-01-09 22:17:09,429 | INFO     | 
[2026-01-09 23:18:13] 2026-01-09 22:17:09,429 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-09 23:18:13] 2026-01-09 22:17:09,983 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,983 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,983 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,983 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,985 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,985 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:18:13] 2026-01-09 22:17:09,985 | INFO     | job 6963189241 has completed (purged errors)
[2026-01-09 23:18:13] 2026-01-09 22:17:09,986 | INFO     | overall cleanup function is called
[2026-01-09 23:18:13] 2026-01-09 22:17:10,994 | INFO     | --- collectZombieJob: --- 10, [13498]
[2026-01-09 23:18:13] 2026-01-09 22:17:10,995 | INFO     | zombie collector waiting for pid 13498
[2026-01-09 23:18:13] 2026-01-09 22:17:10,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:18:13] 2026-01-09 22:17:10,995 | INFO     | collected zombie processes
[2026-01-09 23:18:13] 2026-01-09 22:17:10,995 | INFO     | will attempt to kill all subprocesses of pid=13498
[2026-01-09 23:18:13] 2026-01-09 22:17:11,081 | INFO     | process IDs to be killed: [13498] (in reverse order)
[2026-01-09 23:18:13] 2026-01-09 22:17:11,640 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:18:13] 2026-01-09 22:17:11,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:18:13] 2026-01-09 22:17:11,642 | INFO     | did not find any defunct processes belonging to 13498
[2026-01-09 23:18:13] 2026-01-09 22:17:11,644 | INFO     | did not find any defunct processes belonging to 13498
[2026-01-09 23:18:13] 2026-01-09 22:17:11,644 | INFO     | ready for new job
[2026-01-09 23:18:13] 2026-01-09 22:17:11,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:18:13] 2026-01-09 22:17:11,647 | INFO     | ***************************************
[2026-01-09 23:18:13] 2026-01-09 22:17:11,647 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:18:13] 2026-01-09 22:17:11,647 | INFO     | ***************************************
[2026-01-09 23:18:13] 2026-01-09 22:17:11,647 | INFO     | 
[2026-01-09 23:18:13] 2026-01-09 22:17:11,648 | INFO     | pilot is running in a VM
[2026-01-09 23:18:13] 2026-01-09 22:17:11,648 | INFO     | architecture information:
[2026-01-09 23:18:13] 2026-01-09 22:17:11,648 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:18:13] 2026-01-09 22:17:11,899 | INFO     | cat /etc/os-release:
[2026-01-09 23:18:13] NAME="CentOS Linux"
[2026-01-09 23:18:13] VERSION="7 (Core)"
[2026-01-09 23:18:13] ID="centos"
[2026-01-09 23:18:13] ID_LIKE="rhel fedora"
[2026-01-09 23:18:13] VERSION_ID="7"
[2026-01-09 23:18:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:18:13] ANSI_COLOR="0;31"
[2026-01-09 23:18:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:18:13] HOME_URL="https://www.centos.org/"
[2026-01-09 23:18:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:18:13] 
[2026-01-09 23:18:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:18:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:18:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:18:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:18:13] 
[2026-01-09 23:18:13] 2026-01-09 22:17:11,899 | INFO     | ***************************************
[2026-01-09 23:18:13] 2026-01-09 22:17:12,403 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-09 23:18:13] 2026-01-09 22:17:12,597 | INFO     | sufficient remaining disk space (497802018816 B)
[2026-01-09 23:18:13] 2026-01-09 22:17:12,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:18:13] 2026-01-09 22:17:12,598 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:18:13] 2026-01-09 22:17:12,598 | INFO     | update_server=False
[2026-01-09 23:18:13] 2026-01-09 22:17:12,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:18:13] 2026-01-09 22:17:12,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:18:13] 2026-01-09 22:17:12,600 | INFO     | aborting loop
[2026-01-09 23:18:13] 2026-01-09 22:17:12,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:18:13] 2026-01-09 22:17:12,814 | INFO     | all data control threads have been joined
[2026-01-09 23:18:13] 2026-01-09 22:17:12,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:18:13] 2026-01-09 22:17:13,118 | INFO     | all payload control threads have been joined
[2026-01-09 23:18:13] 2026-01-09 22:17:13,605 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:13,606 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:13,632 | INFO     | all job control threads have been joined
[2026-01-09 23:18:13] 2026-01-09 22:17:13,668 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:13,792 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:13,793 | INFO     | [job] validate thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:13,816 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:13,821 | INFO     | [data] control thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:13,825 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:13,948 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:14,124 | INFO     | [payload] control thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:14,310 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:14,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:18:13] 2026-01-09 22:17:14,638 | INFO     | [job] control thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:14,952 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:14,953 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:15,449 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:16,708 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:18:13] 2026-01-09 22:17:41,632 | INFO     | PID=7035 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 23:18:13] 2026-01-09 22:17:41,632 | INFO     | .. there are 2 such processes running
[2026-01-09 23:18:13] 2026-01-09 22:17:41,633 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:18:13] 2026-01-09 22:17:41,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:18:13] 2026-01-09 22:17:41,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:18:13] 2026-01-09 22:18:02,948 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:18:13] 2026-01-09 22:18:04,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771539531584)>', '<ExcThread(monitor, started 139771078747904)>']
[2026-01-09 23:18:13] 2026-01-09 22:18:04,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:18:13] 2026-01-09 22:18:04,772 | INFO     | [monitor] control thread has ended
[2026-01-09 23:18:13] 2026-01-09 22:18:09,668 | INFO     | all workflow threads have been joined
[2026-01-09 23:18:13] 2026-01-09 22:18:09,669 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:18:13] 2026-01-09 22:18:09,669 | INFO     | traces error code: 0
[2026-01-09 23:18:13] 2026-01-09 22:18:09,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:18:13] 2026-01-09 22:18:10,153 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:18:13] 2026-01-09 22:18:10,216 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:18:13] 2026-01-09 22:18:10,331 [wrapper] pilotpid: 7035
[2026-01-09 23:18:13] 2026-01-09 22:18:10,458 [wrapper] Pilot exit status: 0
[2026-01-09 23:18:13] 2026-01-09 22:18:11,013 [wrapper] pandaids: 6963189241
[2026-01-09 23:18:13] 2026-01-09 22:18:12,166 [wrapper] cleanup supervisor_pilot 14910 7036
[2026-01-09 23:18:13] 2026-01-09 22:18:12,264 [wrapper] Test setup, not cleaning
[2026-01-09 23:18:13] 2026-01-09 22:18:12,288 [wrapper] apfmon messages muted
[2026-01-09 23:18:13] 2026-01-09 22:18:12,425 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:18:13] 2026-01-09 22:18:12,578 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:18:13]  *** Error codes and diagnostics ***
[2026-01-09 23:18:13]     "exeErrorCode": 0,
[2026-01-09 23:18:13]     "exeErrorDiag": "",
[2026-01-09 23:18:13]     "pilotErrorCode": 0,
[2026-01-09 23:18:13]     "pilotErrorDiag": "",
[2026-01-09 23:18:13]  *** Listing of results directory ***
[2026-01-09 23:18:13] total 450156
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 23:18:13] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc       100 Jan  9 20:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:18:13] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 20:07 run_atlas
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc       105 Jan  9 20:07 job.xml
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc      6391 Jan  9 20:07 init_data.xml
[2026-01-09 23:18:13] -rw-r--r--. 2 boinc boinc 225544212 Jan  9 20:07 EVNT.47898824._001463.pool.root.1
[2026-01-09 23:18:13] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:07 start_atlas.sh
[2026-01-09 23:18:13] drwxrwx--x. 2 boinc boinc        68 Jan  9 20:07 shared
[2026-01-09 23:18:13] -rw-r--r--. 2 boinc boinc    592399 Jan  9 20:07 input.tar.gz
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc         0 Jan  9 20:07 boinc_lockfile
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc      2520 Jan  9 20:07 pandaJob.out
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc    989372 Jan  9 20:07 agis_schedconf.cvmfs.json
[2026-01-09 23:18:13] drwx------. 5 boinc boinc      4096 Jan  9 20:07 pilot3
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc 227605398 Jan  9 23:13 HITS.47898826._038123.pool.root.1
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc       531 Jan  9 23:14 boinc_task_state.xml
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc      1028 Jan  9 23:15 memory_monitor_summary.json
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc   1516240 Jan  9 23:15 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc    427537 Jan  9 23:15 log.47898826._038123.job.log.tgz.1
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc      7781 Jan  9 23:17 heartbeat.json
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc        95 Jan  9 23:17 pilot_heartbeat.json
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc        28 Jan  9 23:18 wrapper_checkpoint.txt
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc      8192 Jan  9 23:18 boinc_mmap_file
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc      4883 Jan  9 23:18 pilotlog.txt
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc   1525739 Jan  9 23:18 log.47898826._038123.job.log.1
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc       357 Jan  9 23:18 output.list
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc       620 Jan  9 23:18 runtime_log
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc   1976320 Jan  9 23:18 result.tar.gz
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc      8817 Jan  9 23:18 runtime_log.err
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc       657 Jan  9 23:18 0tTMDmECJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmz8lKDmbU2Ugm.diag
[2026-01-09 23:18:13] -rw-r--r--. 1 boinc boinc     20685 Jan  9 23:18 stderr.txt
[2026-01-09 23:18:13] HITS file was successfully produced:
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc 227605398 Jan  9 23:13 shared/HITS.pool.root.1
[2026-01-09 23:18:13]  *** Contents of shared directory: ***
[2026-01-09 23:18:13] total 445060
[2026-01-09 23:18:13] -rw-r--r--. 2 boinc boinc 225544212 Jan  9 20:07 ATLAS.root_0
[2026-01-09 23:18:13] -rw-r--r--. 2 boinc boinc     15847 Jan  9 20:07 start_atlas.sh
[2026-01-09 23:18:13] -rw-r--r--. 2 boinc boinc    592399 Jan  9 20:07 input.tar.gz
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc 227605398 Jan  9 23:13 HITS.pool.root.1
[2026-01-09 23:18:13] -rw-------. 1 boinc boinc   1976320 Jan  9 23:18 result.tar.gz
23:18:15 (3311): run_atlas exited; CPU time 79732.152023
23:18:15 (3311): called boinc_finish(0)

</stderr_txt>
]]>

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