Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:00:01 (4069763): wrapper (7.7.26015): starting
15:00:01 (4069763): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:00:01] Arguments: --nthreads 8
[2026-01-09 15:00:01] Threads: 8
[2026-01-09 15:00:01] Checking for CVMFS
[2026-01-09 15:00:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:00:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:00:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:00:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:00:04] 2.13.3.0 8081 21954 157152 154955 2 135 36190620 39288833 8814 16776704 0 9642781 99.596 9246386 35453 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 15:00:04] CVMFS is ok
[2026-01-09 15:00:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:00:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:00:04] Further information can be found at the LHC@home message board.
[2026-01-09 15:00:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:00:04] Checking for apptainer binary...
[2026-01-09 15:00:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:00:04] Running /usr/bin/apptainer --version
[2026-01-09 15:00:04] apptainer version 1.4.5-2.el9
[2026-01-09 15:00:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:00:04] c-210-13.aglt2.org
[2026-01-09 15:00:04] apptainer works
[2026-01-09 15:00:04] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:00:04] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:00:05] Starting ATLAS job with PandaID=6963188911
[2026-01-09 15:00:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:54:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:54:48] 2026-01-10 01:53:43,645 | INFO     | extracted standard info from prmon json
[2026-01-09 20:54:48] 2026-01-10 01:53:43,645 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:54:48] 2026-01-10 01:53:43,645 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:54:48] 2026-01-10 01:53:43,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:54:48] 2026-01-10 01:53:43,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:54:48] 2026-01-10 01:53:43,651 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:54:48] 2026-01-10 01:53:43,652 | INFO     | sum of square deviations: 12732554871.014517
[2026-01-09 20:54:48] 2026-01-10 01:53:43,655 | INFO     | sum of deviations: 17178669388.65216
[2026-01-09 20:54:48] 2026-01-10 01:53:43,655 | INFO     | mean x: 1767999493.289855
[2026-01-09 20:54:48] 2026-01-10 01:53:43,655 | INFO     | mean y: 2525784.243478261
[2026-01-09 20:54:48] 2026-01-10 01:53:43,655 | INFO     | intersect: -2382846129.108501
[2026-01-09 20:54:48] 2026-01-10 01:53:43,656 | INFO     | chi2: 2.40281046369536
[2026-01-09 20:54:48] 2026-01-10 01:53:43,657 | INFO     | sum of square deviations: 12186914810.753
[2026-01-09 20:54:48] 2026-01-10 01:53:43,659 | INFO     | sum of deviations: 38578170303.94116
[2026-01-09 20:54:48] 2026-01-10 01:53:43,660 | INFO     | mean x: 1767999340.7882352
[2026-01-09 20:54:48] 2026-01-10 01:53:43,660 | INFO     | mean y: 2531693.9852941176
[2026-01-09 20:54:48] 2026-01-10 01:53:43,660 | INFO     | intersect: -5594141518.664327
[2026-01-09 20:54:48] 2026-01-10 01:53:43,660 | INFO     | chi2: 1.7261340888890129
[2026-01-09 20:54:48] 2026-01-10 01:53:43,661 | INFO     | current chi2=1.7261340888890129 (change=28.161870652322058 %)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,661 | INFO     | sum of square deviations: 11657109252.913416
[2026-01-09 20:54:48] 2026-01-10 01:53:43,665 | INFO     | sum of deviations: 37866417899.86571
[2026-01-09 20:54:48] 2026-01-10 01:53:43,665 | INFO     | mean x: 1767999188.2895522
[2026-01-09 20:54:48] 2026-01-10 01:53:43,665 | INFO     | mean y: 2531489.104477612
[2026-01-09 20:54:48] 2026-01-10 01:53:43,665 | INFO     | intersect: -5740555811.348123
[2026-01-09 20:54:48] 2026-01-10 01:53:43,666 | INFO     | chi2: 1.7265881515220376
[2026-01-09 20:54:48] 2026-01-10 01:53:43,666 | INFO     | current chi2=1.7265881515220376 (change=-0.026305177329356156 %)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,666 | INFO     | right removable region: 334
[2026-01-09 20:54:48] 2026-01-10 01:53:43,667 | INFO     | sum of square deviations: 12186916336.173466
[2026-01-09 20:54:48] 2026-01-10 01:53:43,669 | INFO     | sum of deviations: -43769670142.16177
[2026-01-09 20:54:48] 2026-01-10 01:53:43,670 | INFO     | mean x: 1767999645.7911766
[2026-01-09 20:54:48] 2026-01-10 01:53:43,670 | INFO     | mean y: 2542719.279411765
[2026-01-09 20:54:48] 2026-01-10 01:53:43,670 | INFO     | intersect: 6352365691.153235
[2026-01-09 20:54:48] 2026-01-10 01:53:43,670 | INFO     | chi2: 0.7573153118321403
[2026-01-09 20:54:48] 2026-01-10 01:53:43,671 | INFO     | current chi2=0.7573153118321403 (change=68.48210363344928 %)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,671 | INFO     | sum of square deviations: 11657071555.743267
[2026-01-09 20:54:48] 2026-01-10 01:53:43,674 | INFO     | sum of deviations: -42599656817.77911
[2026-01-09 20:54:48] 2026-01-10 01:53:43,674 | INFO     | mean x: 1767999798.2955225
[2026-01-09 20:54:48] 2026-01-10 01:53:43,674 | INFO     | mean y: 2542379.280597015
[2026-01-09 20:54:48] 2026-01-10 01:53:43,674 | INFO     | intersect: 6463529111.766148
[2026-01-09 20:54:48] 2026-01-10 01:53:43,675 | INFO     | chi2: 0.7564167200139259
[2026-01-09 20:54:48] 2026-01-10 01:53:43,675 | INFO     | current chi2=0.7564167200139259 (change=0.1186549121845252 %)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,675 | INFO     | left removable region: 20
[2026-01-09 20:54:48] 2026-01-10 01:53:43,675 | INFO     | sum of square deviations: 9599279159.544533
[2026-01-09 20:54:48] 2026-01-10 01:53:43,678 | INFO     | sum of deviations: -23375603544.582794
[2026-01-09 20:54:48] 2026-01-10 01:53:43,678 | INFO     | mean x: 1767999767.7929935
[2026-01-09 20:54:48] 2026-01-10 01:53:43,678 | INFO     | mean y: 2549590.0987261147
[2026-01-09 20:54:48] 2026-01-10 01:53:43,678 | INFO     | intersect: 4307879287.459501
[2026-01-09 20:54:48] 2026-01-10 01:53:43,679 | INFO     | chi2: 0.0391034228585812
[2026-01-09 20:54:48] 2026-01-10 01:53:43,679 | INFO     | current memory leak: -2.44 B/s (using 314 data points, chi2=0.04)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | could have reported an average CPU frequency of 2600 MHz (15 samples)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | ..............................
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | . Timing measurements:
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | . get job = 0 s
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | . initial setup = 3 s
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | . payload setup = 36 s
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | . stage-in = 0 s
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | . payload execution = 21029 s
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | . stage-out = 3 s
[2026-01-09 20:54:48] 2026-01-10 01:53:43,680 | INFO     | . log creation = 0 s
[2026-01-09 20:54:48] 2026-01-10 01:53:43,681 | INFO     | ..............................
[2026-01-09 20:54:48] 2026-01-10 01:53:43,778 | INFO     | 
[2026-01-09 20:54:48] 2026-01-10 01:53:43,779 | INFO     | job summary report
[2026-01-09 20:54:48] 2026-01-10 01:53:43,779 | INFO     | --------------------------------------------------
[2026-01-09 20:54:48] 2026-01-10 01:53:43,779 | INFO     | PanDA job id: 6963188911
[2026-01-09 20:54:48] 2026-01-10 01:53:43,779 | INFO     | task id: 47898826
[2026-01-09 20:54:48] 2026-01-10 01:53:43,780 | INFO     | errors: (none)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:54:48] 2026-01-10 01:53:43,780 | INFO     | pilot state: finished 
[2026-01-09 20:54:48] 2026-01-10 01:53:43,780 | INFO     | transexitcode: 0
[2026-01-09 20:54:48] 2026-01-10 01:53:43,780 | INFO     | exeerrorcode: 0
[2026-01-09 20:54:48] 2026-01-10 01:53:43,780 | INFO     | exeerrordiag: 
[2026-01-09 20:54:48] 2026-01-10 01:53:43,781 | INFO     | exitcode: 0
[2026-01-09 20:54:48] 2026-01-10 01:53:43,781 | INFO     | exitmsg: OK
[2026-01-09 20:54:48] 2026-01-10 01:53:43,781 | INFO     | cpuconsumptiontime: 65707 s
[2026-01-09 20:54:48] 2026-01-10 01:53:43,781 | INFO     | nevents: 400
[2026-01-09 20:54:48] 2026-01-10 01:53:43,781 | INFO     | neventsw: 0
[2026-01-09 20:54:48] 2026-01-10 01:53:43,781 | INFO     | pid: 4084039
[2026-01-09 20:54:48] 2026-01-10 01:53:43,782 | INFO     | pgrp: 4084039
[2026-01-09 20:54:48] 2026-01-10 01:53:43,782 | INFO     | corecount: 8
[2026-01-09 20:54:48] 2026-01-10 01:53:43,782 | INFO     | event service: False
[2026-01-09 20:54:48] 2026-01-10 01:53:43,782 | INFO     | sizes: {0: 2283744, 1: 2283999, 2: 2283999, 13: 2284027, 23: 2284083, 34: 2284111, 35: 2284529, 45: 2284557, 21067: 2318912, 21071: 2327910, 21074: 2327966, 21084:
[2026-01-09 20:54:48] 2026-01-10 01:53:43,782 | INFO     | --------------------------------------------------
[2026-01-09 20:54:48] 2026-01-10 01:53:43,782 | INFO     | 
[2026-01-09 20:54:48] 2026-01-10 01:53:43,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 20:54:48] 2026-01-10 01:53:43,799 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,799 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,799 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,799 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,801 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,801 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:54:48] 2026-01-10 01:53:43,801 | INFO     | job 6963188911 has completed (purged errors)
[2026-01-09 20:54:48] 2026-01-10 01:53:43,801 | INFO     | overall cleanup function is called
[2026-01-09 20:54:48] 2026-01-10 01:53:44,599 | INFO     | PID=4075471 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 20:54:48] 2026-01-10 01:53:44,599 | INFO     | .. there are 7 such processes running
[2026-01-09 20:54:48] 2026-01-10 01:53:44,809 | INFO     | --- collectZombieJob: --- 10, [4084039]
[2026-01-09 20:54:48] 2026-01-10 01:53:44,809 | INFO     | zombie collector waiting for pid 4084039
[2026-01-09 20:54:48] 2026-01-10 01:53:44,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:54:48] 2026-01-10 01:53:44,809 | INFO     | collected zombie processes
[2026-01-09 20:54:48] 2026-01-10 01:53:44,810 | INFO     | will attempt to kill all subprocesses of pid=4084039
[2026-01-09 20:54:48] 2026-01-10 01:53:45,020 | INFO     | process IDs to be killed: [4084039] (in reverse order)
[2026-01-09 20:54:48] 2026-01-10 01:53:45,088 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:54:48] 2026-01-10 01:53:45,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:54:48] 2026-01-10 01:53:45,096 | INFO     | did not find any defunct processes belonging to 4084039
[2026-01-09 20:54:48] 2026-01-10 01:53:45,103 | INFO     | did not find any defunct processes belonging to 4084039
[2026-01-09 20:54:48] 2026-01-10 01:53:45,103 | INFO     | ready for new job
[2026-01-09 20:54:48] 2026-01-10 01:53:45,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:54:48] 2026-01-10 01:53:45,106 | INFO     | ***************************************
[2026-01-09 20:54:48] 2026-01-10 01:53:45,106 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:54:48] 2026-01-10 01:53:45,106 | INFO     | ***************************************
[2026-01-09 20:54:48] 2026-01-10 01:53:45,106 | INFO     | 
[2026-01-09 20:54:48] 2026-01-10 01:53:45,108 | INFO     | architecture information:
[2026-01-09 20:54:48] 2026-01-10 01:53:45,108 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:54:48] 2026-01-10 01:53:45,124 | INFO     | cat /etc/os-release:
[2026-01-09 20:54:48] NAME="CentOS Linux"
[2026-01-09 20:54:48] VERSION="7 (Core)"
[2026-01-09 20:54:48] ID="centos"
[2026-01-09 20:54:48] ID_LIKE="rhel fedora"
[2026-01-09 20:54:48] VERSION_ID="7"
[2026-01-09 20:54:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:54:48] ANSI_COLOR="0;31"
[2026-01-09 20:54:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:54:48] HOME_URL="https://www.centos.org/"
[2026-01-09 20:54:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:54:48] 
[2026-01-09 20:54:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:54:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:54:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:54:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:54:48] 
[2026-01-09 20:54:48] 2026-01-10 01:53:45,124 | INFO     | ***************************************
[2026-01-09 20:54:48] 2026-01-10 01:53:45,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 20:54:48] 2026-01-10 01:53:45,643 | INFO     | sufficient remaining disk space (53290729472 B)
[2026-01-09 20:54:48] 2026-01-10 01:53:45,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:54:48] 2026-01-10 01:53:45,644 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:54:48] 2026-01-10 01:53:45,644 | INFO     | update_server=False
[2026-01-09 20:54:48] 2026-01-10 01:53:45,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:54:48] 2026-01-10 01:53:45,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:54:48] 2026-01-10 01:53:45,774 | INFO     | all job control threads have been joined
[2026-01-09 20:54:48] 2026-01-10 01:53:45,805 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:54:48] 2026-01-10 01:53:45,805 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:54:48] 2026-01-10 01:53:45,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:54:48] 2026-01-10 01:53:45,806 | INFO     | will abort loop
[2026-01-09 20:54:48] 2026-01-10 01:53:46,537 | INFO     | all data control threads have been joined
[2026-01-09 20:54:48] 2026-01-10 01:53:46,652 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:46,653 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:46,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:54:48] 2026-01-10 01:53:46,780 | INFO     | [job] control thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:46,806 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:46,807 | INFO     | [job] validate thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:46,810 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:46,927 | INFO     | all payload control threads have been joined
[2026-01-09 20:54:48] 2026-01-10 01:53:47,466 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:47,521 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:47,542 | INFO     | [data] control thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:47,639 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:47,642 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:47,735 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:47,954 | INFO     | [payload] control thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:48,760 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:48,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:54:48] 2026-01-10 01:53:52,809 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:53:55,816 | INFO     | job.realtimelogging is not enabled
[2026-01-09 20:54:48] 2026-01-10 01:53:56,835 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:54:48] 2026-01-10 01:54:17,358 | INFO     | PID=4075471 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:54:48] 2026-01-10 01:54:17,358 | INFO     | .. there are 7 such processes running
[2026-01-09 20:54:48] 2026-01-10 01:54:17,359 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:54:48] 2026-01-10 01:54:17,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:54:48] 2026-01-10 01:54:17,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:54:48] 2026-01-10 01:54:42,488 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:54:48] 2026-01-10 01:54:43,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067637917504)>', '<ExcThread(monitor, started 140067272128256)>']
[2026-01-09 20:54:48] 2026-01-10 01:54:43,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:54:48] 2026-01-10 01:54:43,516 | INFO     | [monitor] control thread has ended
[2026-01-09 20:54:48] 2026-01-10 01:54:48,189 | INFO     | all workflow threads have been joined
[2026-01-09 20:54:48] 2026-01-10 01:54:48,189 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:54:48] 2026-01-10 01:54:48,189 | INFO     | traces error code: 0
[2026-01-09 20:54:48] 2026-01-10 01:54:48,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:54:48] 2026-01-10 01:54:48,492 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:54:48] 2026-01-10 01:54:48,494 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:54:48] 2026-01-10 01:54:48,497 [wrapper] pilotpid: 4075471
[2026-01-09 20:54:48] 2026-01-10 01:54:48,499 [wrapper] Pilot exit status: 0
[2026-01-09 20:54:48] 2026-01-10 01:54:48,511 [wrapper] pandaids: 6963188911
[2026-01-09 20:54:48] 2026-01-10 01:54:48,561 [wrapper] cleanup supervisor_pilot  410876 4075472
[2026-01-09 20:54:48] 2026-01-10 01:54:48,564 [wrapper] Test setup, not cleaning
[2026-01-09 20:54:48] 2026-01-10 01:54:48,582 [wrapper] apfmon messages muted
[2026-01-09 20:54:48] 2026-01-10 01:54:48,585 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:54:48] 2026-01-10 01:54:48,588 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:54:48]  *** Error codes and diagnostics ***
[2026-01-09 20:54:48]     "exeErrorCode": 0,
[2026-01-09 20:54:48]     "exeErrorDiag": "",
[2026-01-09 20:54:48]     "pilotErrorCode": 0,
[2026-01-09 20:54:48]     "pilotErrorDiag": "",
[2026-01-09 20:54:48]  *** Listing of results directory ***
[2026-01-09 20:54:48] total 448356
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 20:54:48] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas       100 Jan  9 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:54:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 15:00 run_atlas
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas       105 Jan  9 15:00 job.xml
[2026-01-09 20:54:48] -rw-r--r--. 2 boincer umatlas 222028643 Jan  9 15:00 EVNT.47898824._001452.pool.root.1
[2026-01-09 20:54:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:00 start_atlas.sh
[2026-01-09 20:54:48] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 15:00 shared
[2026-01-09 20:54:48] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 15:00 input.tar.gz
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas         0 Jan  9 15:00 boinc_lockfile
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 15:00 pandaJob.out
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas        57 Jan  9 15:00 setup.sh.local
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas    989364 Jan  9 15:01 agis_schedconf.cvmfs.json
[2026-01-09 20:54:48] drwx------. 5 boincer umatlas      4096 Jan  9 15:01 pilot3
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas      6657 Jan  9 20:46 init_data.xml
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas 226370487 Jan  9 20:52 HITS.47898826._037848.pool.root.1
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas       531 Jan  9 20:52 boinc_task_state.xml
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas      1040 Jan  9 20:53 memory_monitor_summary.json
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:53 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas    567405 Jan  9 20:53 log.47898826._037848.job.log.tgz.1
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas      7828 Jan  9 20:53 heartbeat.json
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas        95 Jan  9 20:54 pilot_heartbeat.json
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:54 wrapper_checkpoint.txt
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:54 boinc_mmap_file
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas      5081 Jan  9 20:54 pilotlog.txt
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas   2832196 Jan  9 20:54 log.47898826._037848.job.log.1
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas       357 Jan  9 20:54 output.list
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:54 runtime_log
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas   3420160 Jan  9 20:54 result.tar.gz
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 20:54 runtime_log.err
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas       657 Jan  9 20:54 bcJMDm1BJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmd7lKDmHQAnqm.diag
[2026-01-09 20:54:48] -rw-r--r--. 1 boincer umatlas     21229 Jan  9 20:54 stderr.txt
[2026-01-09 20:54:48] HITS file was successfully produced:
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas 226370487 Jan  9 20:52 shared/HITS.pool.root.1
[2026-01-09 20:54:48]  *** Contents of shared directory: ***
[2026-01-09 20:54:48] total 441836
[2026-01-09 20:54:48] -rw-r--r--. 2 boincer umatlas 222028643 Jan  9 15:00 ATLAS.root_0
[2026-01-09 20:54:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:00 start_atlas.sh
[2026-01-09 20:54:48] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 15:00 input.tar.gz
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas 226370487 Jan  9 20:52 HITS.pool.root.1
[2026-01-09 20:54:48] -rw-------. 1 boincer umatlas   3420160 Jan  9 20:54 result.tar.gz
20:54:50 (4069763): run_atlas exited; CPU time 66159.156076
20:54:50 (4069763): called boinc_finish(0)

</stderr_txt>
]]>

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