Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:06 (4013458): wrapper (7.7.26015): starting
13:37:06 (4013458): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:37:06] Arguments: --nthreads 8
[2026-01-09 13:37:06] Threads: 8
[2026-01-09 13:37:06] Checking for CVMFS
[2026-01-09 13:37:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:37:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:37:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:37:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:37:08] 2.13.3.0 5206 70866 743332 154952 1 438 30739116 40960000 61646 16776704 0 646722749 99.813 309395227 29785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 13:37:08] CVMFS is ok
[2026-01-09 13:37:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:37:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:37:08] Further information can be found at the LHC@home message board.
[2026-01-09 13:37:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:37:08] Checking for apptainer binary...
[2026-01-09 13:37:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:37:08] Running /usr/bin/apptainer --version
[2026-01-09 13:37:08] apptainer version 1.4.5-2.el9
[2026-01-09 13:37:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:37:09] lc-12-9.aglt2.org
[2026-01-09 13:37:09] apptainer works
[2026-01-09 13:37:10] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:37:10] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:37:10] Starting ATLAS job with PandaID=6963189381
[2026-01-09 13:37:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:44:35]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:44:35] 2026-01-10 02:43:51,157 | INFO     | time since job start (29138s) is within the limit (349056.0s)
[2026-01-09 21:44:35] 2026-01-10 02:43:51,588 | INFO     | monitor loop #1422: job 0:6963189381 is in state 'finished'
[2026-01-09 21:44:35] 2026-01-10 02:43:51,588 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:44:35] 2026-01-10 02:43:54,125 | INFO     | monitor loop #1423: job 0:6963189381 is in state 'finished'
[2026-01-09 21:44:35] 2026-01-10 02:43:54,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:44:35] 2026-01-10 02:43:56,706 | INFO     | monitor loop #1424: job 0:6963189381 is in state 'finished'
[2026-01-09 21:44:35] 2026-01-10 02:43:56,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:44:35] 2026-01-10 02:43:57,411 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:44:35] 2026-01-10 02:43:57,424 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2984.2734583333336
[2026-01-09 21:44:35] 2026-01-10 02:43:57,455 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963189381/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:44:35] 2026-01-10 02:43:57,456 | INFO     | extracted standard info from prmon json
[2026-01-09 21:44:35] 2026-01-10 02:43:57,456 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:44:35] 2026-01-10 02:43:57,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:44:35] 2026-01-10 02:43:57,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:44:35] 2026-01-10 02:43:57,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:44:35] 2026-01-10 02:43:57,472 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:44:35] 2026-01-10 02:43:57,473 | INFO     | sum of square deviations: 33232064611.22938
[2026-01-09 21:44:35] 2026-01-10 02:43:57,478 | INFO     | sum of deviations: 145075483892.9474
[2026-01-09 21:44:35] 2026-01-10 02:43:57,478 | INFO     | mean x: 1767998496.0610526
[2026-01-09 21:44:35] 2026-01-10 02:43:57,478 | INFO     | mean y: 2484658.1052631577
[2026-01-09 21:44:35] 2026-01-10 02:43:57,479 | INFO     | intersect: -7715760968.180301
[2026-01-09 21:44:35] 2026-01-10 02:43:57,479 | INFO     | chi2: 3.52779160895842
[2026-01-09 21:44:35] 2026-01-10 02:43:57,480 | INFO     | sum of square deviations: 32193644683.710598
[2026-01-09 21:44:35] 2026-01-10 02:43:57,485 | INFO     | sum of deviations: 174389034786.119
[2026-01-09 21:44:35] 2026-01-10 02:43:57,485 | INFO     | mean x: 1767998343.561702
[2026-01-09 21:44:35] 2026-01-10 02:43:57,485 | INFO     | mean y: 2488924.6510638297
[2026-01-09 21:44:35] 2026-01-10 02:43:57,485 | INFO     | intersect: -9574541811.26889
[2026-01-09 21:44:35] 2026-01-10 02:43:57,486 | INFO     | chi2: 2.8447919630905836
[2026-01-09 21:44:35] 2026-01-10 02:43:57,486 | INFO     | current chi2=2.8447919630905836 (change=19.3605439769582 %)
[2026-01-09 21:44:35] 2026-01-10 02:43:57,486 | INFO     | right removable region: 469
[2026-01-09 21:44:35] 2026-01-10 02:43:57,486 | INFO     | sum of square deviations: 32193626993.71061
[2026-01-09 21:44:35] 2026-01-10 02:43:57,491 | INFO     | sum of deviations: 22577793733.034023
[2026-01-09 21:44:35] 2026-01-10 02:43:57,491 | INFO     | mean x: 1767998648.561702
[2026-01-09 21:44:35] 2026-01-10 02:43:57,491 | INFO     | mean y: 2502612.2574468087
[2026-01-09 21:44:35] 2026-01-10 02:43:57,492 | INFO     | intersect: -1237416978.5145826
[2026-01-09 21:44:35] 2026-01-10 02:43:57,492 | INFO     | chi2: 0.909940970961465
[2026-01-09 21:44:35] 2026-01-10 02:43:57,492 | INFO     | current chi2=0.909940970961465 (change=74.20649880081423 %)
[2026-01-09 21:44:35] 2026-01-10 02:43:57,493 | INFO     | sum of square deviations: 31177050251.191345
[2026-01-09 21:44:35] 2026-01-10 02:43:57,497 | INFO     | sum of deviations: -7492983619.118282
[2026-01-09 21:44:35] 2026-01-10 02:43:57,498 | INFO     | mean x: 1767998801.0623655
[2026-01-09 21:44:35] 2026-01-10 02:43:57,498 | INFO     | mean y: 2507117.1075268816
[2026-01-09 21:44:35] 2026-01-10 02:43:57,498 | INFO     | intersect: 427421788.2597424
[2026-01-09 21:44:35] 2026-01-10 02:43:57,498 | INFO     | chi2: 0.765084753272725
[2026-01-09 21:44:35] 2026-01-10 02:43:57,499 | INFO     | current chi2=0.765084753272725 (change=15.919298318404273 %)
[2026-01-09 21:44:35] 2026-01-10 02:43:57,499 | INFO     | left removable region: 20
[2026-01-09 21:44:35] 2026-01-10 02:43:57,499 | INFO     | sum of square deviations: 28068250398.253822
[2026-01-09 21:44:35] 2026-01-10 02:43:57,503 | INFO     | sum of deviations: 9194564437.659231
[2026-01-09 21:44:35] 2026-01-10 02:43:57,504 | INFO     | mean x: 1767998923.0623608
[2026-01-09 21:44:35] 2026-01-10 02:43:57,504 | INFO     | mean y: 2513816.547884187
[2026-01-09 21:44:35] 2026-01-10 02:43:57,504 | INFO     | intersect: -576645190.2714477
[2026-01-09 21:44:35] 2026-01-10 02:43:57,504 | INFO     | chi2: 0.043102463952471956
[2026-01-09 21:44:35] 2026-01-10 02:43:57,505 | INFO     | current memory leak: 0.33 B/s (using 449 data points, chi2=0.04)
[2026-01-09 21:44:35] 2026-01-10 02:43:57,505 | INFO     | could have reported an average CPU frequency of 2925 MHz (19 samples)
[2026-01-09 21:44:35] 2026-01-10 02:43:57,505 | INFO     | ..............................
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | . Timing measurements:
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | . get job = 0 s
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | . initial setup = 4 s
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | . payload setup = 44 s
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | . stage-in = 0 s
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | . payload execution = 28979 s
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | . stage-out = 9 s
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | . log creation = 1 s
[2026-01-09 21:44:35] 2026-01-10 02:43:57,506 | INFO     | ..............................
[2026-01-09 21:44:35] 2026-01-10 02:43:58,175 | INFO     | PID=4028833 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:44:35] 2026-01-10 02:43:58,176 | INFO     | .. there are 96 such processes running
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | 
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | job summary report
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | --------------------------------------------------
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | PanDA job id: 6963189381
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | task id: 47898826
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | errors: (none)
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | pilot state: finished 
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | transexitcode: 0
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | exeerrorcode: 0
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | exeerrordiag: 
[2026-01-09 21:44:35] 2026-01-10 02:43:58,486 | INFO     | exitcode: 0
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | exitmsg: OK
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | cpuconsumptiontime: 57705 s
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | nevents: 400
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | neventsw: 0
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | pid: 4051736
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | pgrp: 4051736
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | corecount: 8
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | event service: False
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | sizes: {0: 2283744, 1: 2283999, 2: 2283999, 13: 2284027, 25: 2284083, 35: 2284373, 36: 2284529, 29030: 2321319, 29042: 2330317, 29044: 2330373, 29075: 2330567}
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | --------------------------------------------------
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | 
[2026-01-09 21:44:35] 2026-01-10 02:43:58,487 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:44:35] 2026-01-10 02:43:58,542 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,542 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:44:35] 2026-01-10 02:43:58,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:44:35] 2026-01-10 02:43:58,545 | INFO     | job 6963189381 has completed (purged errors)
[2026-01-09 21:44:35] 2026-01-10 02:43:58,545 | INFO     | overall cleanup function is called
[2026-01-09 21:44:35] 2026-01-10 02:43:59,557 | INFO     | --- collectZombieJob: --- 10, [4051736]
[2026-01-09 21:44:35] 2026-01-10 02:43:59,558 | INFO     | zombie collector waiting for pid 4051736
[2026-01-09 21:44:35] 2026-01-10 02:43:59,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:44:35] 2026-01-10 02:43:59,558 | INFO     | collected zombie processes
[2026-01-09 21:44:35] 2026-01-10 02:43:59,558 | INFO     | will attempt to kill all subprocesses of pid=4051736
[2026-01-09 21:44:35] 2026-01-10 02:44:01,918 | INFO     | process IDs to be killed: [4051736] (in reverse order)
[2026-01-09 21:44:35] 2026-01-10 02:44:02,915 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:44:35] 2026-01-10 02:44:02,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:44:35] 2026-01-10 02:44:02,944 | INFO     | did not find any defunct processes belonging to 4051736
[2026-01-09 21:44:35] 2026-01-10 02:44:03,001 | INFO     | did not find any defunct processes belonging to 4051736
[2026-01-09 21:44:35] 2026-01-10 02:44:03,001 | INFO     | ready for new job
[2026-01-09 21:44:35] 2026-01-10 02:44:03,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:44:35] 2026-01-10 02:44:03,008 | INFO     | ***************************************
[2026-01-09 21:44:35] 2026-01-10 02:44:03,008 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:44:35] 2026-01-10 02:44:03,008 | INFO     | ***************************************
[2026-01-09 21:44:35] 2026-01-10 02:44:03,008 | INFO     | 
[2026-01-09 21:44:35] 2026-01-10 02:44:03,016 | INFO     | architecture information:
[2026-01-09 21:44:35] 2026-01-10 02:44:03,021 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:44:35] 2026-01-10 02:44:03,061 | INFO     | cat /etc/os-release:
[2026-01-09 21:44:35] NAME="CentOS Linux"
[2026-01-09 21:44:35] VERSION="7 (Core)"
[2026-01-09 21:44:35] ID="centos"
[2026-01-09 21:44:35] ID_LIKE="rhel fedora"
[2026-01-09 21:44:35] VERSION_ID="7"
[2026-01-09 21:44:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:44:35] ANSI_COLOR="0;31"
[2026-01-09 21:44:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:44:35] HOME_URL="https://www.centos.org/"
[2026-01-09 21:44:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:44:35] 
[2026-01-09 21:44:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:44:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:44:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:44:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:44:35] 
[2026-01-09 21:44:35] 2026-01-10 02:44:03,061 | INFO     | ***************************************
[2026-01-09 21:44:35] 2026-01-10 02:44:03,565 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:44:35] 2026-01-10 02:44:03,667 | INFO     | sufficient remaining disk space (409327370240 B)
[2026-01-09 21:44:35] 2026-01-10 02:44:03,667 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:44:35] 2026-01-10 02:44:03,667 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:44:35] 2026-01-10 02:44:03,667 | INFO     | update_server=False
[2026-01-09 21:44:35] 2026-01-10 02:44:03,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:44:35] 2026-01-10 02:44:03,668 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:44:35] 2026-01-10 02:44:03,668 | INFO     | aborting loop
[2026-01-09 21:44:35] 2026-01-10 02:44:03,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:44:35] 2026-01-10 02:44:03,754 | INFO     | all job control threads have been joined
[2026-01-09 21:44:35] 2026-01-10 02:44:03,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:44:35] 2026-01-10 02:44:04,459 | INFO     | all payload control threads have been joined
[2026-01-09 21:44:35] 2026-01-10 02:44:04,569 | INFO     | all data control threads have been joined
[2026-01-09 21:44:35] 2026-01-10 02:44:04,674 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:04,674 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:04,675 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:04,761 | INFO     | [job] control thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:04,793 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:04,804 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:04,804 | INFO     | [job] validate thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:04,876 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:05,249 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:05,466 | INFO     | [payload] control thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:05,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:44:35] 2026-01-10 02:44:05,501 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:05,576 | INFO     | [data] control thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:05,757 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:05,930 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:06,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:09,500 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:44:35] 2026-01-10 02:44:09,708 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:44:35] 2026-01-10 02:44:09,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840927618880)>', '<ExcThread(monitor, started 139840276379392)>']
[2026-01-09 21:44:35] 2026-01-10 02:44:14,772 | INFO     | all workflow threads have been joined
[2026-01-09 21:44:35] 2026-01-10 02:44:14,772 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:44:35] 2026-01-10 02:44:14,772 | INFO     | traces error code: 0
[2026-01-09 21:44:35] 2026-01-10 02:44:14,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:44:35] 2026-01-10 02:44:32,137 | INFO     | PID=4028833 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:44:35] 2026-01-10 02:44:32,142 | INFO     | .. there are 95 such processes running
[2026-01-09 21:44:35] 2026-01-10 02:44:32,142 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:44:35] 2026-01-10 02:44:32,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:44:35] 2026-01-10 02:44:32,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:44:35] 2026-01-10 02:44:32,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:44:35] 2026-01-10 02:44:32,143 | INFO     | [monitor] control thread has ended
[2026-01-09 21:44:35] 2026-01-10 02:44:34,128 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:44:35] 2026-01-10 02:44:34,136 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:44:35] 2026-01-10 02:44:34,162 [wrapper] pilotpid: 4028833
[2026-01-09 21:44:35] 2026-01-10 02:44:34,179 [wrapper] Pilot exit status: 0
[2026-01-09 21:44:35] 2026-01-10 02:44:34,436 [wrapper] pandaids: 6963189381
[2026-01-09 21:44:35] 2026-01-10 02:44:34,842 [wrapper] cleanup supervisor_pilot  451387 4028834
[2026-01-09 21:44:35] 2026-01-10 02:44:34,883 [wrapper] Test setup, not cleaning
[2026-01-09 21:44:35] 2026-01-10 02:44:34,893 [wrapper] apfmon messages muted
[2026-01-09 21:44:35] 2026-01-10 02:44:34,901 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:44:35] 2026-01-10 02:44:34,945 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:44:35]  *** Error codes and diagnostics ***
[2026-01-09 21:44:35]     "exeErrorCode": 0,
[2026-01-09 21:44:35]     "exeErrorDiag": "",
[2026-01-09 21:44:35]     "pilotErrorCode": 0,
[2026-01-09 21:44:35]     "pilotErrorDiag": "",
[2026-01-09 21:44:35]  *** Listing of results directory ***
[2026-01-09 21:44:35] total 444660
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 21:44:35] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:44:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:37 run_atlas
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:37 job.xml
[2026-01-09 21:44:35] -rw-r--r--. 2 boincer umatlas 225588989 Jan  9 13:37 EVNT.47898824._001469.pool.root.1
[2026-01-09 21:44:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:37 start_atlas.sh
[2026-01-09 21:44:35] drwxrwx--x. 2 boincer umatlas        68 Jan  9 13:37 shared
[2026-01-09 21:44:35] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 13:37 input.tar.gz
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:37 boinc_lockfile
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 13:37 pandaJob.out
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas    989372 Jan  9 13:38 agis_schedconf.cvmfs.json
[2026-01-09 21:44:35] drwx------. 5 boincer umatlas      4096 Jan  9 13:38 pilot3
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas      6798 Jan  9 21:37 init_data.xml
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas 218263999 Jan  9 21:41 HITS.47898826._038263.pool.root.1
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:41 boinc_task_state.xml
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas      1043 Jan  9 21:43 memory_monitor_summary.json
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:43 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas    612096 Jan  9 21:43 log.47898826._038263.job.log.tgz.1
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas      7823 Jan  9 21:43 heartbeat.json
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas        95 Jan  9 21:43 pilot_heartbeat.json
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:44 wrapper_checkpoint.txt
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:44 boinc_mmap_file
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas       823 Jan  9 21:44 pilotlog.txt
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas   3175930 Jan  9 21:44 log.47898826._038263.job.log.1
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas       357 Jan  9 21:44 output.list
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:44 runtime_log
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas   3809280 Jan  9 21:44 result.tar.gz
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas      8813 Jan  9 21:44 runtime_log.err
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas       657 Jan  9 21:44 GprNDmECJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJvgKDmWgs9No.diag
[2026-01-09 21:44:35] -rw-r--r--. 1 boincer umatlas     21528 Jan  9 21:44 stderr.txt
[2026-01-09 21:44:35] HITS file was successfully produced:
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas 218263999 Jan  9 21:41 shared/HITS.pool.root.1
[2026-01-09 21:44:35]  *** Contents of shared directory: ***
[2026-01-09 21:44:35] total 437772
[2026-01-09 21:44:35] -rw-r--r--. 2 boincer umatlas 225588989 Jan  9 13:37 ATLAS.root_0
[2026-01-09 21:44:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:37 start_atlas.sh
[2026-01-09 21:44:35] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 13:37 input.tar.gz
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas 218263999 Jan  9 21:41 HITS.pool.root.1
[2026-01-09 21:44:35] -rw-------. 1 boincer umatlas   3809280 Jan  9 21:44 result.tar.gz
21:44:37 (4013458): run_atlas exited; CPU time 59515.032155
21:44:37 (4013458): called boinc_finish(0)

</stderr_txt>
]]>

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