Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:18:18 (17316): wrapper (7.7.26015): starting
23:18:18 (17316): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 23:18:18] Arguments: --nthreads 8
[2026-01-09 23:18:18] Threads: 8
[2026-01-09 23:18:18] Checking for CVMFS
[2026-01-09 23:18:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:18:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:18:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:18:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:18:22] 2.11.2.0 10325 36004 122332 154959 0 62 17047220 25165824 899 130560 0 15408610 99.828 10137937 4006 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 23:18:22] CVMFS is ok
[2026-01-09 23:18:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:18:22] Checking for apptainer binary...
[2026-01-09 23:18:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 23:18:22] Running /usr/bin/apptainer --version
[2026-01-09 23:18:22] apptainer version 1.3.2-1.el7
[2026-01-09 23:18:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:18:44] cg-vwn405.simple-grid.lan
[2026-01-09 23:18:44] apptainer works
[2026-01-09 23:18:44] Set ATHENA_PROC_NUMBER=8
[2026-01-09 23:18:44] Set ATHENA_CORE_NUMBER=8
[2026-01-09 23:18:44] Starting ATLAS job with PandaID=6963188588
[2026-01-09 23:18:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:24:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:24:48] 2026-01-10 04:23:54,260 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 05:24:48] 2026-01-10 04:23:54,262 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963188588/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:24:48] 2026-01-10 04:23:54,263 | INFO     | extracted standard info from prmon json
[2026-01-10 05:24:48] 2026-01-10 04:23:54,263 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:24:48] 2026-01-10 04:23:54,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:24:48] 2026-01-10 04:23:54,264 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 05:24:48] 2026-01-10 04:23:54,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 05:24:48] 2026-01-10 04:23:54,291 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:24:48] 2026-01-10 04:23:54,291 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,295 | INFO     | sum of deviations: 155016274522.00003
[2026-01-10 05:24:48] 2026-01-10 04:23:54,296 | INFO     | mean x: 1768008412.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,296 | INFO     | mean y: 2453922.1014492754
[2026-01-10 05:24:48] 2026-01-10 04:23:54,296 | INFO     | intersect: -21521872120.418495
[2026-01-10 05:24:48] 2026-01-10 04:23:54,297 | INFO     | chi2: 9.293991786973617
[2026-01-10 05:24:48] 2026-01-10 04:23:54,297 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,301 | INFO     | sum of deviations: 199227739323.50003
[2026-01-10 05:24:48] 2026-01-10 04:23:54,301 | INFO     | mean x: 1768008259.5
[2026-01-10 05:24:48] 2026-01-10 04:23:54,301 | INFO     | mean y: 2466164.9794117645
[2026-01-10 05:24:48] 2026-01-10 04:23:54,302 | INFO     | intersect: -28899186556.24011
[2026-01-10 05:24:48] 2026-01-10 04:23:54,302 | INFO     | chi2: 7.796909937219556
[2026-01-10 05:24:48] 2026-01-10 04:23:54,302 | INFO     | current chi2=7.796909937219556 (change=16.10806082110336 %)
[2026-01-10 05:24:48] 2026-01-10 04:23:54,302 | INFO     | right removable region: 339
[2026-01-10 05:24:48] 2026-01-10 04:23:54,303 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,307 | INFO     | sum of deviations: 33449705477.499966
[2026-01-10 05:24:48] 2026-01-10 04:23:54,307 | INFO     | mean x: 1768008564.5
[2026-01-10 05:24:48] 2026-01-10 04:23:54,315 | INFO     | mean y: 2487884.0205882355
[2026-01-10 05:24:48] 2026-01-10 04:23:54,315 | INFO     | intersect: -4850008768.279588
[2026-01-10 05:24:48] 2026-01-10 04:23:54,315 | INFO     | chi2: 4.414728470207933
[2026-01-10 05:24:48] 2026-01-10 04:23:54,316 | INFO     | current chi2=4.414728470207933 (change=52.49911371348982 %)
[2026-01-10 05:24:48] 2026-01-10 04:23:54,316 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,320 | INFO     | sum of deviations: -56631288824.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,320 | INFO     | mean x: 1768008717.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,320 | INFO     | mean y: 2513783.417910448
[2026-01-10 05:24:48] 2026-01-10 04:23:54,320 | INFO     | intersect: 8591301569.180288
[2026-01-10 05:24:48] 2026-01-10 04:23:54,321 | INFO     | chi2: 1.8536185213575016
[2026-01-10 05:24:48] 2026-01-10 04:23:54,321 | INFO     | current chi2=1.8536185213575016 (change=58.01285325096798 %)
[2026-01-10 05:24:48] 2026-01-10 04:23:54,322 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 05:24:48] 2026-01-10 04:23:54,325 | INFO     | sum of deviations: -69600445845.5
[2026-01-10 05:24:48] 2026-01-10 04:23:54,326 | INFO     | mean x: 1768008869.5
[2026-01-10 05:24:48] 2026-01-10 04:23:54,326 | INFO     | mean y: 2517609.1606060606
[2026-01-10 05:24:48] 2026-01-10 04:23:54,326 | INFO     | intersect: 11045343006.953901
[2026-01-10 05:24:48] 2026-01-10 04:23:54,326 | INFO     | chi2: 1.7679104920234865
[2026-01-10 05:24:48] 2026-01-10 04:23:54,327 | INFO     | current chi2=1.7679104920234865 (change=4.623822450330645 %)
[2026-01-10 05:24:48] 2026-01-10 04:23:54,327 | INFO     | left removable region: 30
[2026-01-10 05:24:48] 2026-01-10 04:23:54,327 | INFO     | sum of square deviations: 9148487810.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,331 | INFO     | sum of deviations: 444579712.0000001
[2026-01-10 05:24:48] 2026-01-10 04:23:54,331 | INFO     | mean x: 1768009144.0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,331 | INFO     | mean y: 2523305.556634304
[2026-01-10 05:24:48] 2026-01-10 04:23:54,331 | INFO     | intersect: -83394827.84172967
[2026-01-10 05:24:48] 2026-01-10 04:23:54,340 | INFO     | chi2: 0.05628333535805751
[2026-01-10 05:24:48] 2026-01-10 04:23:54,340 | INFO     | current memory leak: 0.05 B/s (using 309 data points, chi2=0.06)
[2026-01-10 05:24:48] 2026-01-10 04:23:54,341 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 05:24:48] 2026-01-10 04:23:54,341 | INFO     | ..............................
[2026-01-10 05:24:48] 2026-01-10 04:23:54,341 | INFO     | . Timing measurements:
[2026-01-10 05:24:48] 2026-01-10 04:23:54,341 | INFO     | . get job = 0 s
[2026-01-10 05:24:48] 2026-01-10 04:23:54,342 | INFO     | . initial setup = 11 s
[2026-01-10 05:24:48] 2026-01-10 04:23:54,342 | INFO     | . payload setup = 153 s
[2026-01-10 05:24:48] 2026-01-10 04:23:54,342 | INFO     | . stage-in = 0 s
[2026-01-10 05:24:48] 2026-01-10 04:23:54,342 | INFO     | . payload execution = 21161 s
[2026-01-10 05:24:48] 2026-01-10 04:23:54,342 | INFO     | . stage-out = 4 s
[2026-01-10 05:24:48] 2026-01-10 04:23:54,342 | INFO     | . log creation = 1 s
[2026-01-10 05:24:48] 2026-01-10 04:23:54,342 | INFO     | ..............................
[2026-01-10 05:24:48] 2026-01-10 04:23:54,497 | INFO     | 
[2026-01-10 05:24:48] 2026-01-10 04:23:54,498 | INFO     | job summary report
[2026-01-10 05:24:48] 2026-01-10 04:23:54,498 | INFO     | --------------------------------------------------
[2026-01-10 05:24:48] 2026-01-10 04:23:54,498 | INFO     | PanDA job id: 6963188588
[2026-01-10 05:24:48] 2026-01-10 04:23:54,498 | INFO     | task id: 47898826
[2026-01-10 05:24:48] 2026-01-10 04:23:54,498 | INFO     | errors: (none)
[2026-01-10 05:24:48] 2026-01-10 04:23:54,498 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:24:48] 2026-01-10 04:23:54,498 | INFO     | pilot state: finished 
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | transexitcode: 0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | exeerrorcode: 0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | exeerrordiag: 
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | exitcode: 0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | exitmsg: OK
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | cpuconsumptiontime: 79077 s
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | nevents: 400
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | neventsw: 0
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | pid: 27510
[2026-01-10 05:24:48] 2026-01-10 04:23:54,499 | INFO     | pgrp: 27510
[2026-01-10 05:24:48] 2026-01-10 04:23:54,500 | INFO     | corecount: 8
[2026-01-10 05:24:48] 2026-01-10 04:23:54,500 | INFO     | event service: False
[2026-01-10 05:24:48] 2026-01-10 04:23:54,500 | INFO     | sizes: {0: 2283141, 1: 2283997, 12: 2283997, 23: 2284025, 34: 2284053, 44: 2284081, 55: 2284237, 66: 2284265, 77: 2284293, 87: 2284349, 98: 2284377, 106: 2284947, 
[2026-01-10 05:24:48] 2026-01-10 04:23:54,500 | INFO     | --------------------------------------------------
[2026-01-10 05:24:48] 2026-01-10 04:23:54,500 | INFO     | 
[2026-01-10 05:24:48] 2026-01-10 04:23:54,500 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-10 05:24:48] 2026-01-10 04:23:55,047 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,047 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,047 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,047 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,049 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:24:48] 2026-01-10 04:23:55,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:24:48] 2026-01-10 04:23:55,049 | INFO     | job 6963188588 has completed (purged errors)
[2026-01-10 05:24:48] 2026-01-10 04:23:55,050 | INFO     | overall cleanup function is called
[2026-01-10 05:24:48] 2026-01-10 04:23:56,058 | INFO     | --- collectZombieJob: --- 10, [27510]
[2026-01-10 05:24:48] 2026-01-10 04:23:56,059 | INFO     | zombie collector waiting for pid 27510
[2026-01-10 05:24:48] 2026-01-10 04:23:56,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:24:48] 2026-01-10 04:23:56,059 | INFO     | collected zombie processes
[2026-01-10 05:24:48] 2026-01-10 04:23:56,059 | INFO     | will attempt to kill all subprocesses of pid=27510
[2026-01-10 05:24:48] 2026-01-10 04:23:56,164 | INFO     | process IDs to be killed: [27510] (in reverse order)
[2026-01-10 05:24:48] 2026-01-10 04:23:57,244 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:24:48] 2026-01-10 04:23:57,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:24:48] 2026-01-10 04:23:57,247 | INFO     | did not find any defunct processes belonging to 27510
[2026-01-10 05:24:48] 2026-01-10 04:23:57,249 | INFO     | did not find any defunct processes belonging to 27510
[2026-01-10 05:24:48] 2026-01-10 04:23:57,249 | INFO     | ready for new job
[2026-01-10 05:24:48] 2026-01-10 04:23:57,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:24:48] 2026-01-10 04:23:57,252 | INFO     | ***************************************
[2026-01-10 05:24:48] 2026-01-10 04:23:57,252 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:24:48] 2026-01-10 04:23:57,252 | INFO     | ***************************************
[2026-01-10 05:24:48] 2026-01-10 04:23:57,252 | INFO     | 
[2026-01-10 05:24:48] 2026-01-10 04:23:57,253 | INFO     | pilot is running in a VM
[2026-01-10 05:24:48] 2026-01-10 04:23:57,253 | INFO     | architecture information:
[2026-01-10 05:24:48] 2026-01-10 04:23:57,271 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:24:48] 2026-01-10 04:23:57,581 | INFO     | cat /etc/os-release:
[2026-01-10 05:24:48] NAME="CentOS Linux"
[2026-01-10 05:24:48] VERSION="7 (Core)"
[2026-01-10 05:24:48] ID="centos"
[2026-01-10 05:24:48] ID_LIKE="rhel fedora"
[2026-01-10 05:24:48] VERSION_ID="7"
[2026-01-10 05:24:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:24:48] ANSI_COLOR="0;31"
[2026-01-10 05:24:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:24:48] HOME_URL="https://www.centos.org/"
[2026-01-10 05:24:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:24:48] 
[2026-01-10 05:24:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:24:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:24:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:24:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:24:48] 
[2026-01-10 05:24:48] 2026-01-10 04:23:57,581 | INFO     | ***************************************
[2026-01-10 05:24:48] 2026-01-10 04:23:58,085 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-10 05:24:48] 2026-01-10 04:23:58,335 | INFO     | sufficient remaining disk space (496771268608 B)
[2026-01-10 05:24:48] 2026-01-10 04:23:58,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:24:48] 2026-01-10 04:23:58,336 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:24:48] 2026-01-10 04:23:58,336 | INFO     | update_server=False
[2026-01-10 05:24:48] 2026-01-10 04:23:58,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:24:48] 2026-01-10 04:23:58,385 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 05:24:48] 2026-01-10 04:23:58,386 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 05:24:48] 2026-01-10 04:23:58,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:24:48] 2026-01-10 04:23:58,386 | INFO     | will abort loop
[2026-01-10 05:24:48] 2026-01-10 04:23:58,416 | INFO     | all payload control threads have been joined
[2026-01-10 05:24:48] 2026-01-10 04:23:58,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:24:48] 2026-01-10 04:23:58,783 | INFO     | all job control threads have been joined
[2026-01-10 05:24:48] 2026-01-10 04:23:58,869 | INFO     | all data control threads have been joined
[2026-01-10 05:24:48] 2026-01-10 04:23:59,343 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:23:59,392 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:23:59,423 | INFO     | [payload] control thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:23:59,504 | INFO     | [job] validate thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:23:59,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:24:48] 2026-01-10 04:23:59,728 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:23:59,789 | INFO     | [job] control thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:23:59,875 | INFO     | [data] control thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:00,191 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:00,229 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:00,296 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:00,418 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:00,515 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:00,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:24:48] 2026-01-10 04:24:00,612 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:00,617 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:00,677 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:04,550 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:24:48] 2026-01-10 04:24:27,022 | INFO     | PID=21034 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 05:24:48] 2026-01-10 04:24:27,022 | INFO     | .. there are 2 such processes running
[2026-01-10 05:24:48] 2026-01-10 04:24:27,023 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:24:48] 2026-01-10 04:24:27,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:24:48] 2026-01-10 04:24:27,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:24:48] 2026-01-10 04:24:40,176 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:24:48] 2026-01-10 04:24:40,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639612417856)>', '<ExcThread(monitor, started 139639000110848)>']
[2026-01-10 05:24:48] 2026-01-10 04:24:41,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:24:48] 2026-01-10 04:24:41,112 | INFO     | [monitor] control thread has ended
[2026-01-10 05:24:48] 2026-01-10 04:24:45,619 | INFO     | all workflow threads have been joined
[2026-01-10 05:24:48] 2026-01-10 04:24:45,620 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:24:48] 2026-01-10 04:24:45,620 | INFO     | traces error code: 0
[2026-01-10 05:24:48] 2026-01-10 04:24:45,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:24:48] 2026-01-10 04:24:45,969 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:24:48] 2026-01-10 04:24:46,066 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:24:48] 2026-01-10 04:24:46,173 [wrapper] pilotpid: 21034
[2026-01-10 05:24:48] 2026-01-10 04:24:46,231 [wrapper] Pilot exit status: 0
[2026-01-10 05:24:48] 2026-01-10 04:24:46,617 [wrapper] pandaids: 6963188588
[2026-01-10 05:24:48] 2026-01-10 04:24:47,603 [wrapper] cleanup supervisor_pilot 28116 21035
[2026-01-10 05:24:48] 2026-01-10 04:24:47,619 [wrapper] Test setup, not cleaning
[2026-01-10 05:24:48] 2026-01-10 04:24:47,623 [wrapper] apfmon messages muted
[2026-01-10 05:24:48] 2026-01-10 04:24:47,668 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:24:48] 2026-01-10 04:24:47,671 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:24:48]  *** Error codes and diagnostics ***
[2026-01-10 05:24:48]     "exeErrorCode": 0,
[2026-01-10 05:24:48]     "exeErrorDiag": "",
[2026-01-10 05:24:48]     "pilotErrorCode": 0,
[2026-01-10 05:24:48]     "pilotErrorDiag": "",
[2026-01-10 05:24:48]  *** Listing of results directory ***
[2026-01-10 05:24:48] total 445248
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 05:24:48] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc       100 Jan  9 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:24:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 23:18 run_atlas
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc       105 Jan  9 23:18 job.xml
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc      6391 Jan  9 23:18 init_data.xml
[2026-01-10 05:24:48] -rw-r--r--. 2 boinc boinc 223304562 Jan  9 23:18 EVNT.47898824._001446.pool.root.1
[2026-01-10 05:24:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 23:18 start_atlas.sh
[2026-01-10 05:24:48] drwxrwx--x. 2 boinc boinc        68 Jan  9 23:18 shared
[2026-01-10 05:24:48] -rw-r--r--. 2 boinc boinc    592394 Jan  9 23:18 input.tar.gz
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc         0 Jan  9 23:18 boinc_lockfile
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc      2519 Jan  9 23:18 pandaJob.out
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc    989375 Jan  9 23:22 agis_schedconf.cvmfs.json
[2026-01-10 05:24:48] drwx------. 5 boinc boinc      4096 Jan  9 23:23 pilot3
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc 221907942 Jan 10 05:20 HITS.47898826._037675.pool.root.1
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc       531 Jan 10 05:20 boinc_task_state.xml
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc      1013 Jan 10 05:21 memory_monitor_summary.json
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc   1516240 Jan 10 05:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc    535248 Jan 10 05:22 log.47898826._037675.job.log.tgz.1
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc      7767 Jan 10 05:23 heartbeat.json
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc        95 Jan 10 05:24 pilot_heartbeat.json
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc      5070 Jan 10 05:24 pilotlog.txt
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc   2878573 Jan 10 05:24 log.47898826._037675.job.log.1
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc       357 Jan 10 05:24 output.list
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc       620 Jan 10 05:24 runtime_log
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc   3430400 Jan 10 05:24 result.tar.gz
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc      8192 Jan 10 05:24 boinc_mmap_file
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc        28 Jan 10 05:24 wrapper_checkpoint.txt
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc       657 Jan 10 05:24 VOANDmoBJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZsgKDmkg4tsm.diag
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc      8817 Jan 10 05:24 runtime_log.err
[2026-01-10 05:24:48] -rw-r--r--. 1 boinc boinc     20792 Jan 10 05:24 stderr.txt
[2026-01-10 05:24:48] HITS file was successfully produced:
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc 221907942 Jan 10 05:20 shared/HITS.pool.root.1
[2026-01-10 05:24:48]  *** Contents of shared directory: ***
[2026-01-10 05:24:48] total 438728
[2026-01-10 05:24:48] -rw-r--r--. 2 boinc boinc 223304562 Jan  9 23:18 ATLAS.root_0
[2026-01-10 05:24:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 23:18 start_atlas.sh
[2026-01-10 05:24:48] -rw-r--r--. 2 boinc boinc    592394 Jan  9 23:18 input.tar.gz
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc 221907942 Jan 10 05:20 HITS.pool.root.1
[2026-01-10 05:24:48] -rw-------. 1 boinc boinc   3430400 Jan 10 05:24 result.tar.gz
05:24:50 (17316): run_atlas exited; CPU time 79290.173089
05:24:50 (17316): called boinc_finish(0)

</stderr_txt>
]]>

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