Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:43 (4664): wrapper (7.7.26015): starting
21:38:43 (4664): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:38:43] Arguments: --nthreads 8
[2026-01-09 21:38:43] Threads: 8
[2026-01-09 21:38:43] Checking for CVMFS
[2026-01-09 21:38:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:38:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:38:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:38:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:38:43] 2.11.2.0 25311 35904 99984 154956 3 57 17552483 25165825 0 130560 0 14300136 99.722 11533495 2805 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 21:38:43] CVMFS is ok
[2026-01-09 21:38:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:38:43] Checking for apptainer binary...
[2026-01-09 21:38:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:38:43] Running /usr/bin/apptainer --version
[2026-01-09 21:38:43] apptainer version 1.3.2-1.el7
[2026-01-09 21:38:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:38:45] cg-vwn420.simple-grid.lan
[2026-01-09 21:38:45] apptainer works
[2026-01-09 21:38:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:38:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:38:45] Starting ATLAS job with PandaID=6963188237
[2026-01-09 21:38:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 02:26:41]  *** The last 200 lines of the pilot log: ***
[2026-01-10 02:26:41] 2026-01-10 01:25:47,336 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6963188237/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,337 | INFO     | extracted standard info from prmon json
[2026-01-10 02:26:41] 2026-01-10 01:25:47,337 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 02:26:41] 2026-01-10 01:25:47,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 02:26:41] 2026-01-10 01:25:47,338 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 02:26:41] 2026-01-10 01:25:47,338 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 02:26:41] 2026-01-10 01:25:47,344 | INFO     | fitting pss+swap vs Time
[2026-01-10 02:26:41] 2026-01-10 01:25:47,344 | INFO     | sum of square deviations: 6806862510.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,347 | INFO     | sum of deviations: -26055751914.000004
[2026-01-10 02:26:41] 2026-01-10 01:25:47,347 | INFO     | mean x: 1767999686.5
[2026-01-10 02:26:41] 2026-01-10 01:25:47,347 | INFO     | mean y: 2507492.0857142857
[2026-01-10 02:26:41] 2026-01-10 01:25:47,347 | INFO     | intersect: 6770171911.309276
[2026-01-10 02:26:41] 2026-01-10 01:25:47,348 | INFO     | chi2: 2.434694104392392
[2026-01-10 02:26:41] 2026-01-10 01:25:47,348 | INFO     | sum of square deviations: 6448679050.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,351 | INFO     | sum of deviations: -7212872775.999972
[2026-01-10 02:26:41] 2026-01-10 01:25:47,351 | INFO     | mean x: 1767999534.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,351 | INFO     | mean y: 2515400.7381818183
[2026-01-10 02:26:41] 2026-01-10 01:25:47,351 | INFO     | intersect: 1980029804.5243707
[2026-01-10 02:26:41] 2026-01-10 01:25:47,352 | INFO     | chi2: 1.6691827073074896
[2026-01-10 02:26:41] 2026-01-10 01:25:47,352 | INFO     | current chi2=1.6691827073074896 (change=31.441789574462586 %)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,352 | INFO     | sum of square deviations: 6103286527.5
[2026-01-10 02:26:41] 2026-01-10 01:25:47,355 | INFO     | sum of deviations: -7026319739.500003
[2026-01-10 02:26:41] 2026-01-10 01:25:47,355 | INFO     | mean x: 1767999381.5
[2026-01-10 02:26:41] 2026-01-10 01:25:47,355 | INFO     | mean y: 2515483.3074074076
[2026-01-10 02:26:41] 2026-01-10 01:25:47,355 | INFO     | intersect: 2037899025.8765132
[2026-01-10 02:26:41] 2026-01-10 01:25:47,356 | INFO     | chi2: 1.6689248007270012
[2026-01-10 02:26:41] 2026-01-10 01:25:47,356 | INFO     | current chi2=1.6689248007270012 (change=0.015451069517993701 %)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,356 | INFO     | right removable region: 269
[2026-01-10 02:26:41] 2026-01-10 01:25:47,356 | INFO     | sum of square deviations: 6448679050.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,359 | INFO     | sum of deviations: -68123997118.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,359 | INFO     | mean x: 1767999839.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,359 | INFO     | mean y: 2525252.04
[2026-01-10 02:26:41] 2026-01-10 01:25:47,359 | INFO     | intersect: 18679717123.863804
[2026-01-10 02:26:41] 2026-01-10 01:25:47,360 | INFO     | chi2: 0.9959775121831815
[2026-01-10 02:26:41] 2026-01-10 01:25:47,360 | INFO     | current chi2=0.9959775121831815 (change=59.092293755246104 %)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,360 | INFO     | sum of square deviations: 6103286527.5
[2026-01-10 02:26:41] 2026-01-10 01:25:47,363 | INFO     | sum of deviations: -65327506133.500015
[2026-01-10 02:26:41] 2026-01-10 01:25:47,363 | INFO     | mean x: 1767999991.5
[2026-01-10 02:26:41] 2026-01-10 01:25:47,364 | INFO     | mean y: 2523992.5296296296
[2026-01-10 02:26:41] 2026-01-10 01:25:47,364 | INFO     | intersect: 18926595436.387337
[2026-01-10 02:26:41] 2026-01-10 01:25:47,364 | INFO     | chi2: 0.9809394097580305
[2026-01-10 02:26:41] 2026-01-10 01:25:47,364 | INFO     | current chi2=0.9809394097580305 (change=1.5098837314295903 %)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,364 | INFO     | left removable region: 20
[2026-01-10 02:26:41] 2026-01-10 01:25:47,365 | INFO     | sum of square deviations: 4787066500.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,367 | INFO     | sum of deviations: -27368595561.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,367 | INFO     | mean x: 1767999961.0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,367 | INFO     | mean y: 2523802.1606425704
[2026-01-10 02:26:41] 2026-01-10 01:25:47,367 | INFO     | intersect: 10110525411.177935
[2026-01-10 02:26:41] 2026-01-10 01:25:47,368 | INFO     | chi2: 0.14982809717075252
[2026-01-10 02:26:41] 2026-01-10 01:25:47,368 | INFO     | current memory leak: -5.72 B/s (using 249 data points, chi2=0.15)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,369 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,369 | INFO     | ..............................
[2026-01-10 02:26:41] 2026-01-10 01:25:47,369 | INFO     | . Timing measurements:
[2026-01-10 02:26:41] 2026-01-10 01:25:47,369 | INFO     | . get job = 0 s
[2026-01-10 02:26:41] 2026-01-10 01:25:47,369 | INFO     | . initial setup = 2 s
[2026-01-10 02:26:41] 2026-01-10 01:25:47,369 | INFO     | . payload setup = 7 s
[2026-01-10 02:26:41] 2026-01-10 01:25:47,369 | INFO     | . stage-in = 0 s
[2026-01-10 02:26:41] 2026-01-10 01:25:47,370 | INFO     | . payload execution = 17061 s
[2026-01-10 02:26:41] 2026-01-10 01:25:47,370 | INFO     | . stage-out = 4 s
[2026-01-10 02:26:41] 2026-01-10 01:25:47,370 | INFO     | . log creation = 1 s
[2026-01-10 02:26:41] 2026-01-10 01:25:47,370 | INFO     | ..............................
[2026-01-10 02:26:41] 2026-01-10 01:25:47,431 | INFO     | time since job start (17206s) is within the limit (349056.0s)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,488 | INFO     | 
[2026-01-10 02:26:41] 2026-01-10 01:25:47,488 | INFO     | job summary report
[2026-01-10 02:26:41] 2026-01-10 01:25:47,488 | INFO     | --------------------------------------------------
[2026-01-10 02:26:41] 2026-01-10 01:25:47,488 | INFO     | PanDA job id: 6963188237
[2026-01-10 02:26:41] 2026-01-10 01:25:47,488 | INFO     | task id: 47898826
[2026-01-10 02:26:41] 2026-01-10 01:25:47,488 | INFO     | errors: (none)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | pilot state: finished 
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | transexitcode: 0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | exeerrorcode: 0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | exeerrordiag: 
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | exitcode: 0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | exitmsg: OK
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | cpuconsumptiontime: 80952 s
[2026-01-10 02:26:41] 2026-01-10 01:25:47,489 | INFO     | nevents: 400
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | neventsw: 0
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | pid: 14836
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | pgrp: 14836
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | corecount: 8
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | event service: False
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 12: 2284289, 17073: 2315628, 17078: 2324626, 17079: 2324810, 17188: 2325004}
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | --------------------------------------------------
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | 
[2026-01-10 02:26:41] 2026-01-10 01:25:47,490 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-10 02:26:41] 2026-01-10 01:25:47,993 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,994 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,994 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,994 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,994 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,994 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,994 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,994 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,994 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,995 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,995 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,995 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,995 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,995 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,995 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,996 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,996 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 02:26:41] 2026-01-10 01:25:47,996 | INFO     | job 6963188237 has completed (purged errors)
[2026-01-10 02:26:41] 2026-01-10 01:25:47,996 | INFO     | overall cleanup function is called
[2026-01-10 02:26:41] 2026-01-10 01:25:48,545 | INFO     | PID=8388 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 02:26:41] 2026-01-10 01:25:48,546 | INFO     | .. there are 2 such processes running
[2026-01-10 02:26:41] 2026-01-10 01:25:49,006 | INFO     | --- collectZombieJob: --- 10, [14836]
[2026-01-10 02:26:41] 2026-01-10 01:25:49,006 | INFO     | zombie collector waiting for pid 14836
[2026-01-10 02:26:41] 2026-01-10 01:25:49,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 02:26:41] 2026-01-10 01:25:49,006 | INFO     | collected zombie processes
[2026-01-10 02:26:41] 2026-01-10 01:25:49,006 | INFO     | will attempt to kill all subprocesses of pid=14836
[2026-01-10 02:26:41] 2026-01-10 01:25:49,111 | INFO     | process IDs to be killed: [14836] (in reverse order)
[2026-01-10 02:26:41] 2026-01-10 01:25:50,207 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 02:26:41] 2026-01-10 01:25:50,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 02:26:41] 2026-01-10 01:25:50,210 | INFO     | did not find any defunct processes belonging to 14836
[2026-01-10 02:26:41] 2026-01-10 01:25:50,212 | INFO     | did not find any defunct processes belonging to 14836
[2026-01-10 02:26:41] 2026-01-10 01:25:50,212 | INFO     | ready for new job
[2026-01-10 02:26:41] 2026-01-10 01:25:50,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 02:26:41] 2026-01-10 01:25:50,214 | INFO     | ***************************************
[2026-01-10 02:26:41] 2026-01-10 01:25:50,215 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 02:26:41] 2026-01-10 01:25:50,215 | INFO     | ***************************************
[2026-01-10 02:26:41] 2026-01-10 01:25:50,215 | INFO     | 
[2026-01-10 02:26:41] 2026-01-10 01:25:50,215 | INFO     | pilot is running in a VM
[2026-01-10 02:26:41] 2026-01-10 01:25:50,216 | INFO     | architecture information:
[2026-01-10 02:26:41] 2026-01-10 01:25:50,228 | INFO     | executing command: cat /etc/os-release
[2026-01-10 02:26:41] 2026-01-10 01:25:50,503 | INFO     | cat /etc/os-release:
[2026-01-10 02:26:41] NAME="CentOS Linux"
[2026-01-10 02:26:41] VERSION="7 (Core)"
[2026-01-10 02:26:41] ID="centos"
[2026-01-10 02:26:41] ID_LIKE="rhel fedora"
[2026-01-10 02:26:41] VERSION_ID="7"
[2026-01-10 02:26:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 02:26:41] ANSI_COLOR="0;31"
[2026-01-10 02:26:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 02:26:41] HOME_URL="https://www.centos.org/"
[2026-01-10 02:26:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 02:26:41] 
[2026-01-10 02:26:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 02:26:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 02:26:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 02:26:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 02:26:41] 
[2026-01-10 02:26:41] 2026-01-10 01:25:50,503 | INFO     | ***************************************
[2026-01-10 02:26:41] 2026-01-10 01:25:51,007 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-10 02:26:41] 2026-01-10 01:25:51,313 | INFO     | sufficient remaining disk space (497365811200 B)
[2026-01-10 02:26:41] 2026-01-10 01:25:51,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 02:26:41] 2026-01-10 01:25:51,314 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 02:26:41] 2026-01-10 01:25:51,314 | INFO     | update_server=False
[2026-01-10 02:26:41] 2026-01-10 01:25:51,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 02:26:41] 2026-01-10 01:25:51,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 02:26:41] 2026-01-10 01:25:51,350 | INFO     | all job control threads have been joined
[2026-01-10 02:26:41] 2026-01-10 01:25:51,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:26:41] 2026-01-10 01:25:51,713 | INFO     | aborting loop
[2026-01-10 02:26:41] 2026-01-10 01:25:51,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 02:26:41] 2026-01-10 01:25:51,968 | INFO     | all data control threads have been joined
[2026-01-10 02:26:41] 2026-01-10 01:25:51,973 | INFO     | all payload control threads have been joined
[2026-01-10 02:26:41] 2026-01-10 01:25:52,320 | INFO     | [job] retrieve thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:52,325 | INFO     | [payload] validate_post thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:52,356 | INFO     | [job] control thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:52,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:26:41] 2026-01-10 01:25:52,719 | INFO     | [job] job monitor thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:52,974 | INFO     | [data] control thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:52,978 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:52,978 | INFO     | [payload] control thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:53,117 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:53,323 | INFO     | [data] copytool_out thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:53,514 | INFO     | [payload] failed_post thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:53,527 | INFO     | [job] queue monitor thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:53,606 | INFO     | [data] copytool_in thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:53,643 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:53,778 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:53,804 | INFO     | [job] validate thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:25:55,819 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 02:26:41] 2026-01-10 01:26:20,688 | INFO     | PID=8388 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 02:26:41] 2026-01-10 01:26:20,688 | INFO     | .. there are 2 such processes running
[2026-01-10 02:26:41] 2026-01-10 01:26:20,688 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 02:26:41] 2026-01-10 01:26:20,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 02:26:41] 2026-01-10 01:26:20,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 02:26:41] 2026-01-10 01:26:30,813 | INFO     | [monitor] cgroup control has ended
[2026-01-10 02:26:41] 2026-01-10 01:26:31,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839158900544)>', '<ExcThread(monitor, started 139838330222336)>']
[2026-01-10 02:26:41] 2026-01-10 01:26:31,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 02:26:41] 2026-01-10 01:26:31,755 | INFO     | [monitor] control thread has ended
[2026-01-10 02:26:41] 2026-01-10 01:26:36,423 | INFO     | all workflow threads have been joined
[2026-01-10 02:26:41] 2026-01-10 01:26:36,423 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 02:26:41] 2026-01-10 01:26:36,423 | INFO     | traces error code: 0
[2026-01-10 02:26:41] 2026-01-10 01:26:36,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 02:26:41] 2026-01-10 01:26:36,848 [wrapper] ==== pilot stdout END ====
[2026-01-10 02:26:41] 2026-01-10 01:26:36,943 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 02:26:41] 2026-01-10 01:26:37,045 [wrapper] pilotpid: 8388
[2026-01-10 02:26:41] 2026-01-10 01:26:37,143 [wrapper] Pilot exit status: 0
[2026-01-10 02:26:41] 2026-01-10 01:26:37,783 [wrapper] pandaids: 6963188237
[2026-01-10 02:26:41] 2026-01-10 01:26:38,737 [wrapper] cleanup supervisor_pilot 24468 8389
[2026-01-10 02:26:41] 2026-01-10 01:26:38,810 [wrapper] Test setup, not cleaning
[2026-01-10 02:26:41] 2026-01-10 01:26:38,880 [wrapper] apfmon messages muted
[2026-01-10 02:26:41] 2026-01-10 01:26:38,951 [wrapper] ==== wrapper stdout END ====
[2026-01-10 02:26:41] 2026-01-10 01:26:39,021 [wrapper] ==== wrapper stderr END ====
[2026-01-10 02:26:41]  *** Error codes and diagnostics ***
[2026-01-10 02:26:41]     "exeErrorCode": 0,
[2026-01-10 02:26:41]     "exeErrorDiag": "",
[2026-01-10 02:26:41]     "pilotErrorCode": 0,
[2026-01-10 02:26:41]     "pilotErrorDiag": "",
[2026-01-10 02:26:41]  *** Listing of results directory ***
[2026-01-10 02:26:41] total 450672
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 02:26:41] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc       100 Jan  9 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 02:26:41] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 21:38 run_atlas
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc       105 Jan  9 21:38 job.xml
[2026-01-10 02:26:41] -rw-r--r--. 2 boinc boinc 224812074 Jan  9 21:38 EVNT.47898824._001434.pool.root.1
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc      6390 Jan  9 21:38 init_data.xml
[2026-01-10 02:26:41] -rw-r--r--. 2 boinc boinc     15847 Jan  9 21:38 start_atlas.sh
[2026-01-10 02:26:41] drwxrwx--x. 2 boinc boinc        68 Jan  9 21:38 shared
[2026-01-10 02:26:41] -rw-r--r--. 2 boinc boinc    592399 Jan  9 21:38 input.tar.gz
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc         0 Jan  9 21:38 boinc_lockfile
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc      2520 Jan  9 21:38 pandaJob.out
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc    989381 Jan  9 21:38 agis_schedconf.cvmfs.json
[2026-01-10 02:26:41] drwx------. 5 boinc boinc      4096 Jan  9 21:39 pilot3
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc 227180741 Jan 10 02:22 HITS.47898826._037389.pool.root.1
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc       531 Jan 10 02:22 boinc_task_state.xml
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc      1014 Jan 10 02:23 memory_monitor_summary.json
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc   1516240 Jan 10 02:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc    496767 Jan 10 02:23 log.47898826._037389.job.log.tgz.1
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc        95 Jan 10 02:25 pilot_heartbeat.json
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc      7776 Jan 10 02:25 heartbeat.json
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc      4883 Jan 10 02:26 pilotlog.txt
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc      8192 Jan 10 02:26 boinc_mmap_file
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc        28 Jan 10 02:26 wrapper_checkpoint.txt
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc   2301547 Jan 10 02:26 log.47898826._037389.job.log.1
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc       357 Jan 10 02:26 output.list
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc       620 Jan 10 02:26 runtime_log
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc   2816000 Jan 10 02:26 result.tar.gz
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc      8817 Jan 10 02:26 runtime_log.err
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc       656 Jan 10 02:26 H06NDmnBJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDme5lKDmYSGF0n.diag
[2026-01-10 02:26:41] -rw-r--r--. 1 boinc boinc     20828 Jan 10 02:26 stderr.txt
[2026-01-10 02:26:41] HITS file was successfully produced:
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc 227180741 Jan 10 02:22 shared/HITS.pool.root.1
[2026-01-10 02:26:41]  *** Contents of shared directory: ***
[2026-01-10 02:26:41] total 444752
[2026-01-10 02:26:41] -rw-r--r--. 2 boinc boinc 224812074 Jan  9 21:38 ATLAS.root_0
[2026-01-10 02:26:41] -rw-r--r--. 2 boinc boinc     15847 Jan  9 21:38 start_atlas.sh
[2026-01-10 02:26:41] -rw-r--r--. 2 boinc boinc    592399 Jan  9 21:38 input.tar.gz
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc 227180741 Jan 10 02:22 HITS.pool.root.1
[2026-01-10 02:26:41] -rw-------. 1 boinc boinc   2816000 Jan 10 02:26 result.tar.gz
02:26:43 (4664): run_atlas exited; CPU time 81094.476492
02:26:43 (4664): called boinc_finish(0)

</stderr_txt>
]]>

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