Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:20:18 (212399): wrapper (7.7.26015): starting
14:20:18 (212399): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:20:18] Arguments: --nthreads 8
[2026-01-09 14:20:18] Threads: 8
[2026-01-09 14:20:18] Checking for CVMFS
[2026-01-09 14:20:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:20:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:20:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:20:20] 2.13.3.0 5206 70909 735508 154955 2 40 30866446 40960001 59912 16776704 0 647014091 99.813 309401062 29785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:20:20] CVMFS is ok
[2026-01-09 14:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:20:20] Further information can be found at the LHC@home message board.
[2026-01-09 14:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:20:20] Checking for apptainer binary...
[2026-01-09 14:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:20:20] Running /usr/bin/apptainer --version
[2026-01-09 14:20:20] apptainer version 1.4.5-2.el9
[2026-01-09 14:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:20:21] lc-12-9.aglt2.org
[2026-01-09 14:20:21] apptainer works
[2026-01-09 14:20:21] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:20:21] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:20:21] Starting ATLAS job with PandaID=6963188529
[2026-01-09 14:20:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:03:38]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:03:38] 2026-01-10 04:02:46,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:38] 2026-01-10 04:02:47,194 | INFO     | time since job start (31275s) is within the limit (349056.0s)
[2026-01-09 23:03:38] 2026-01-10 04:02:49,039 | INFO     | monitor loop #1518: job 0:6963188529 is in state 'finished'
[2026-01-09 23:03:38] 2026-01-10 04:02:49,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:38] 2026-01-10 04:02:49,201 | INFO     | time since job start (31277s) is within the limit (349056.0s)
[2026-01-09 23:03:38] 2026-01-10 04:02:51,208 | INFO     | time since job start (31279s) is within the limit (349056.0s)
[2026-01-09 23:03:38] 2026-01-10 04:02:51,560 | INFO     | monitor loop #1519: job 0:6963188529 is in state 'finished'
[2026-01-09 23:03:38] 2026-01-10 04:02:51,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:38] 2026-01-10 04:02:53,215 | INFO     | time since job start (31281s) is within the limit (349056.0s)
[2026-01-09 23:03:38] 2026-01-10 04:02:53,509 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 23:03:38] 2026-01-10 04:02:53,530 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2968.1123333333344
[2026-01-09 23:03:38] 2026-01-10 04:02:53,635 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963188529/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:03:38] 2026-01-10 04:02:53,636 | INFO     | extracted standard info from prmon json
[2026-01-09 23:03:38] 2026-01-10 04:02:53,636 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:03:38] 2026-01-10 04:02:53,636 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:03:38] 2026-01-10 04:02:53,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:03:38] 2026-01-10 04:02:53,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:03:38] 2026-01-10 04:02:53,694 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:03:38] 2026-01-10 04:02:53,695 | INFO     | sum of square deviations: 41132598291.233246
[2026-01-09 23:03:38] 2026-01-10 04:02:53,736 | INFO     | sum of deviations: 110866778125.46661
[2026-01-09 23:03:38] 2026-01-10 04:02:53,736 | INFO     | mean x: 1768002163.5666666
[2026-01-09 23:03:38] 2026-01-10 04:02:53,736 | INFO     | mean y: 2510836.780392157
[2026-01-09 23:03:38] 2026-01-10 04:02:53,737 | INFO     | intersect: -4762875055.10156
[2026-01-09 23:03:38] 2026-01-10 04:02:53,737 | INFO     | chi2: 3.34497750115199
[2026-01-09 23:03:38] 2026-01-10 04:02:53,748 | INFO     | sum of square deviations: 39934642013.710976
[2026-01-09 23:03:38] 2026-01-10 04:02:53,800 | INFO     | sum of deviations: 141652495465.88312
[2026-01-09 23:03:38] 2026-01-10 04:02:53,800 | INFO     | mean x: 1768002011.0673268
[2026-01-09 23:03:38] 2026-01-10 04:02:53,800 | INFO     | mean y: 2514723.1504950495
[2026-01-09 23:03:38] 2026-01-10 04:02:53,800 | INFO     | intersect: -6268779677.595634
[2026-01-09 23:03:38] 2026-01-10 04:02:53,801 | INFO     | chi2: 2.6646031826164984
[2026-01-09 23:03:38] 2026-01-10 04:02:53,801 | INFO     | current chi2=2.6646031826164984 (change=20.340176228425303 %)
[2026-01-09 23:03:38] 2026-01-10 04:02:53,801 | INFO     | right removable region: 504
[2026-01-09 23:03:38] 2026-01-10 04:02:53,802 | INFO     | sum of square deviations: 39934621273.71096
[2026-01-09 23:03:38] 2026-01-10 04:02:53,864 | INFO     | sum of deviations: -18965348592.479202
[2026-01-09 23:03:38] 2026-01-10 04:02:53,864 | INFO     | mean x: 1768002316.0673268
[2026-01-09 23:03:38] 2026-01-10 04:02:53,864 | INFO     | mean y: 2527331.8376237624
[2026-01-09 23:03:38] 2026-01-10 04:02:53,864 | INFO     | intersect: 842169205.6570412
[2026-01-09 23:03:38] 2026-01-10 04:02:53,865 | INFO     | chi2: 0.8115965443379257
[2026-01-09 23:03:38] 2026-01-10 04:02:53,865 | INFO     | current chi2=0.8115965443379257 (change=75.73686088894719 %)
[2026-01-09 23:03:38] 2026-01-10 04:02:53,866 | INFO     | sum of square deviations: 38760164116.82151
[2026-01-09 23:03:38] 2026-01-10 04:02:53,902 | INFO     | sum of deviations: -35171752771.50402
[2026-01-09 23:03:38] 2026-01-10 04:02:53,902 | INFO     | mean x: 1768002468.566
[2026-01-09 23:03:38] 2026-01-10 04:02:53,902 | INFO     | mean y: 2529429.288
[2026-01-09 23:03:38] 2026-01-10 04:02:53,902 | INFO     | intersect: 1606850441.3557756
[2026-01-09 23:03:38] 2026-01-10 04:02:53,903 | INFO     | chi2: 0.7624252279666753
[2026-01-09 23:03:38] 2026-01-10 04:02:53,903 | INFO     | current chi2=0.7624252279666753 (change=6.058591145353232 %)
[2026-01-09 23:03:38] 2026-01-10 04:02:53,903 | INFO     | left removable region: 20
[2026-01-09 23:03:38] 2026-01-10 04:02:53,904 | INFO     | sum of square deviations: 35156992630.88426
[2026-01-09 23:03:38] 2026-01-10 04:02:53,945 | INFO     | sum of deviations: -9709098118.760273
[2026-01-09 23:03:38] 2026-01-10 04:02:53,945 | INFO     | mean x: 1768002590.5661156
[2026-01-09 23:03:38] 2026-01-10 04:02:53,945 | INFO     | mean y: 2534377.6487603304
[2026-01-09 23:03:38] 2026-01-10 04:02:53,945 | INFO     | intersect: 490793166.0568806
[2026-01-09 23:03:38] 2026-01-10 04:02:53,946 | INFO     | chi2: 0.05110844032264118
[2026-01-09 23:03:38] 2026-01-10 04:02:53,946 | INFO     | current memory leak: -0.28 B/s (using 484 data points, chi2=0.05)
[2026-01-09 23:03:38] 2026-01-10 04:02:53,980 | INFO     | could have reported an average CPU frequency of 2925 MHz (20 samples)
[2026-01-09 23:03:38] 2026-01-10 04:02:53,980 | INFO     | ..............................
[2026-01-09 23:03:38] 2026-01-10 04:02:53,980 | INFO     | . Timing measurements:
[2026-01-09 23:03:38] 2026-01-10 04:02:53,980 | INFO     | . get job = 0 s
[2026-01-09 23:03:38] 2026-01-10 04:02:53,980 | INFO     | . initial setup = 7 s
[2026-01-09 23:03:38] 2026-01-10 04:02:53,980 | INFO     | . payload setup = 43 s
[2026-01-09 23:03:38] 2026-01-10 04:02:53,986 | INFO     | . stage-in = 0 s
[2026-01-09 23:03:38] 2026-01-10 04:02:53,987 | INFO     | . payload execution = 31122 s
[2026-01-09 23:03:38] 2026-01-10 04:02:53,987 | INFO     | . stage-out = 6 s
[2026-01-09 23:03:38] 2026-01-10 04:02:53,987 | INFO     | . log creation = 1 s
[2026-01-09 23:03:38] 2026-01-10 04:02:53,987 | INFO     | ..............................
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | 
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | job summary report
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | --------------------------------------------------
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | PanDA job id: 6963188529
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | task id: 47898826
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | errors: (none)
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | pilot state: finished 
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | transexitcode: 0
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | exeerrorcode: 0
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | exeerrordiag: 
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | exitcode: 0
[2026-01-09 23:03:38] 2026-01-10 04:02:54,507 | INFO     | exitmsg: OK
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | cpuconsumptiontime: 61386 s
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | nevents: 400
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | neventsw: 0
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | pid: 257119
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | pgrp: 257119
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | corecount: 8
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | event service: False
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | sizes: {0: 2283800, 1: 2283999, 2: 2283999, 13: 2284027, 25: 2284083, 35: 2284373, 36: 2284529, 31171: 2322455, 31173: 2322454, 31180: 2331564, 31213: 2331702}
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | --------------------------------------------------
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | 
[2026-01-09 23:03:38] 2026-01-10 04:02:54,508 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 23:03:38] 2026-01-10 04:02:54,593 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,593 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,593 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,593 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:03:38] 2026-01-10 04:02:54,595 | INFO     | job 6963188529 has completed (purged errors)
[2026-01-09 23:03:38] 2026-01-10 04:02:54,595 | INFO     | overall cleanup function is called
[2026-01-09 23:03:38] 2026-01-10 04:02:55,644 | INFO     | --- collectZombieJob: --- 10, [257119]
[2026-01-09 23:03:38] 2026-01-10 04:02:55,645 | INFO     | zombie collector waiting for pid 257119
[2026-01-09 23:03:38] 2026-01-10 04:02:55,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:03:38] 2026-01-10 04:02:55,645 | INFO     | collected zombie processes
[2026-01-09 23:03:38] 2026-01-10 04:02:55,645 | INFO     | will attempt to kill all subprocesses of pid=257119
[2026-01-09 23:03:38] 2026-01-10 04:02:57,760 | INFO     | process IDs to be killed: [257119] (in reverse order)
[2026-01-09 23:03:38] 2026-01-10 04:02:58,117 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:03:38] 2026-01-10 04:02:58,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:03:38] 2026-01-10 04:02:58,319 | INFO     | did not find any defunct processes belonging to 257119
[2026-01-09 23:03:38] 2026-01-10 04:02:58,521 | INFO     | did not find any defunct processes belonging to 257119
[2026-01-09 23:03:38] 2026-01-10 04:02:58,591 | INFO     | ready for new job
[2026-01-09 23:03:38] 2026-01-10 04:02:58,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:03:38] 2026-01-10 04:02:58,593 | INFO     | ***************************************
[2026-01-09 23:03:38] 2026-01-10 04:02:58,668 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:03:38] 2026-01-10 04:02:58,668 | INFO     | ***************************************
[2026-01-09 23:03:38] 2026-01-10 04:02:58,668 | INFO     | 
[2026-01-09 23:03:38] 2026-01-10 04:02:58,687 | INFO     | architecture information:
[2026-01-09 23:03:38] 2026-01-10 04:02:58,719 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:03:38] 2026-01-10 04:02:58,801 | INFO     | cat /etc/os-release:
[2026-01-09 23:03:38] NAME="CentOS Linux"
[2026-01-09 23:03:38] VERSION="7 (Core)"
[2026-01-09 23:03:38] ID="centos"
[2026-01-09 23:03:38] ID_LIKE="rhel fedora"
[2026-01-09 23:03:38] VERSION_ID="7"
[2026-01-09 23:03:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:03:38] ANSI_COLOR="0;31"
[2026-01-09 23:03:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:03:38] HOME_URL="https://www.centos.org/"
[2026-01-09 23:03:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:03:38] 
[2026-01-09 23:03:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:03:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:03:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:03:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:03:38] 
[2026-01-09 23:03:38] 2026-01-10 04:02:58,802 | INFO     | ***************************************
[2026-01-09 23:03:38] 2026-01-10 04:02:59,305 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 23:03:38] 2026-01-10 04:02:59,375 | INFO     | sufficient remaining disk space (405504262144 B)
[2026-01-09 23:03:38] 2026-01-10 04:02:59,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:03:38] 2026-01-10 04:02:59,375 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:03:38] 2026-01-10 04:02:59,375 | INFO     | update_server=False
[2026-01-09 23:03:38] 2026-01-10 04:02:59,375 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:03:38] 2026-01-10 04:02:59,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:03:38] 2026-01-10 04:02:59,673 | INFO     | all data control threads have been joined
[2026-01-09 23:03:38] 2026-01-10 04:02:59,707 | INFO     | all payload control threads have been joined
[2026-01-09 23:03:38] 2026-01-10 04:02:59,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:03:38] 2026-01-10 04:02:59,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:03:38] 2026-01-10 04:03:00,107 | INFO     | all job control threads have been joined
[2026-01-09 23:03:38] 2026-01-10 04:03:00,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:03:38] 2026-01-10 04:03:00,203 | INFO     | aborting loop
[2026-01-09 23:03:38] 2026-01-10 04:03:00,382 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:00,431 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:00,431 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:00,432 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:00,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:00,596 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:00,679 | INFO     | [data] control thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:00,713 | INFO     | [payload] control thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:01,086 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:01,113 | INFO     | [job] control thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:01,209 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:01,220 | INFO     | [job] validate thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:01,650 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:01,650 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:01,860 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:03,938 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:03:38] 2026-01-10 04:03:29,205 | INFO     | PID=225677 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 23:03:38] 2026-01-10 04:03:29,206 | INFO     | .. there are 95 such processes running
[2026-01-09 23:03:38] 2026-01-10 04:03:29,229 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:03:38] 2026-01-10 04:03:29,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:03:38] 2026-01-10 04:03:29,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:03:38] 2026-01-10 04:03:29,767 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:03:38] 2026-01-10 04:03:31,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500643354432)>', '<ExcThread(monitor, started 140500275271424)>']
[2026-01-09 23:03:38] 2026-01-10 04:03:32,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:03:38] 2026-01-10 04:03:32,252 | INFO     | [monitor] control thread has ended
[2026-01-09 23:03:38] 2026-01-10 04:03:36,801 | INFO     | all workflow threads have been joined
[2026-01-09 23:03:38] 2026-01-10 04:03:36,801 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:03:38] 2026-01-10 04:03:36,801 | INFO     | traces error code: 0
[2026-01-09 23:03:38] 2026-01-10 04:03:36,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:03:38] 2026-01-10 04:03:37,159 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:03:38] 2026-01-10 04:03:37,185 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:03:38] 2026-01-10 04:03:37,195 [wrapper] pilotpid: 225677
[2026-01-09 23:03:38] 2026-01-10 04:03:37,207 [wrapper] Pilot exit status: 0
[2026-01-09 23:03:38] 2026-01-10 04:03:37,350 [wrapper] pandaids: 6963188529
[2026-01-09 23:03:38] 2026-01-10 04:03:37,850 [wrapper] cleanup supervisor_pilot 1044012 225678
[2026-01-09 23:03:38] 2026-01-10 04:03:37,871 [wrapper] Test setup, not cleaning
[2026-01-09 23:03:38] 2026-01-10 04:03:37,880 [wrapper] apfmon messages muted
[2026-01-09 23:03:38] 2026-01-10 04:03:37,891 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:03:38] 2026-01-10 04:03:37,919 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:03:38]  *** Error codes and diagnostics ***
[2026-01-09 23:03:38]     "exeErrorCode": 0,
[2026-01-09 23:03:38]     "exeErrorDiag": "",
[2026-01-09 23:03:38]     "pilotErrorCode": 0,
[2026-01-09 23:03:38]     "pilotErrorDiag": "",
[2026-01-09 23:03:38]  *** Listing of results directory ***
[2026-01-09 23:03:38] total 452476
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 23:03:38] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:03:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:20 run_atlas
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:20 job.xml
[2026-01-09 23:03:38] -rw-r--r--. 2 boincer umatlas 224821519 Jan  9 14:20 EVNT.47898824._001443.pool.root.1
[2026-01-09 23:03:38] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 14:20 input.tar.gz
[2026-01-09 23:03:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:20 start_atlas.sh
[2026-01-09 23:03:38] drwxrwx--x. 2 boincer umatlas        68 Jan  9 14:20 shared
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:20 boinc_lockfile
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 14:20 pandaJob.out
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas    989364 Jan  9 14:21 agis_schedconf.cvmfs.json
[2026-01-09 23:03:38] drwx------. 5 boincer umatlas      4096 Jan  9 14:21 pilot3
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas      6798 Jan  9 22:57 init_data.xml
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas 226516989 Jan  9 23:01 HITS.47898826._037616.pool.root.1
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas       531 Jan  9 23:01 boinc_task_state.xml
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas      1043 Jan  9 23:02 memory_monitor_summary.json
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas    641899 Jan  9 23:02 log.47898826._037616.job.log.tgz.1
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas      7816 Jan  9 23:02 heartbeat.json
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas        95 Jan  9 23:03 pilot_heartbeat.json
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:03 boinc_mmap_file
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas        28 Jan  9 23:03 wrapper_checkpoint.txt
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas      4824 Jan  9 23:03 pilotlog.txt
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas   3402483 Jan  9 23:03 log.47898826._037616.job.log.1
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas       357 Jan  9 23:03 output.list
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:03 runtime_log
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas   4065280 Jan  9 23:03 result.tar.gz
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas      8813 Jan  9 23:03 runtime_log.err
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas       657 Jan  9 23:03 laSLDmoBJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9rgKDm4nYCln.diag
[2026-01-09 23:03:38] -rw-r--r--. 1 boincer umatlas     21436 Jan  9 23:03 stderr.txt
[2026-01-09 23:03:38] HITS file was successfully produced:
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas 226516989 Jan  9 23:01 shared/HITS.pool.root.1
[2026-01-09 23:03:38]  *** Contents of shared directory: ***
[2026-01-09 23:03:38] total 445336
[2026-01-09 23:03:38] -rw-r--r--. 2 boincer umatlas 224821519 Jan  9 14:20 ATLAS.root_0
[2026-01-09 23:03:38] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 14:20 input.tar.gz
[2026-01-09 23:03:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:20 start_atlas.sh
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas 226516989 Jan  9 23:01 HITS.pool.root.1
[2026-01-09 23:03:38] -rw-------. 1 boincer umatlas   4065280 Jan  9 23:03 result.tar.gz
23:03:39 (212399): run_atlas exited; CPU time 63297.422976
23:03:39 (212399): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN