Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:10:42 (988608): wrapper (7.7.26015): starting
21:10:42 (988608): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:10:42] Arguments: --nthreads 8
[2026-01-09 21:10:42] Threads: 8
[2026-01-09 21:10:42] Checking for CVMFS
[2026-01-09 21:10:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:10:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:10:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:10:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:10:43] 2.13.3.0 12359 94234 371944 154963 1 101 29670273 32935936 22075 16776704 0 428673212 99.577 530583625 32979 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 21:10:43] CVMFS is ok
[2026-01-09 21:10:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:10:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:10:43] Further information can be found at the LHC@home message board.
[2026-01-09 21:10:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:10:43] Checking for apptainer binary...
[2026-01-09 21:10:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:10:43] Running /usr/bin/apptainer --version
[2026-01-09 21:10:43] apptainer version 1.4.5-2.el9
[2026-01-09 21:10:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:10:43] c6-12-29-3.aglt2.org
[2026-01-09 21:10:43] apptainer works
[2026-01-09 21:10:43] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:10:43] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:10:43] Starting ATLAS job with PandaID=6963157506
[2026-01-09 21:10:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:40:09 (988608): BOINC client no longer exists - exiting
22:40:09 (988608): timer handler: client dead, exiting
22:47:46 (1263882): wrapper (7.7.26015): starting
22:47:46 (1263882): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 22:47:46] Arguments: --nthreads 9
[2026-01-09 22:47:46] Threads: 9
[2026-01-09 22:47:46] This job has been restarted, cleaning up previous attempt
[2026-01-09 22:47:46] Checking for CVMFS
[2026-01-09 22:47:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:47:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:47:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:47:47] 2.13.3.0 12359 94331 380576 154966 0 307 29811863 32935937 18601 16776704 0 428879462 99.577 530587717 32979 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 22:47:47] CVMFS is ok
[2026-01-09 22:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 22:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 22:47:47] Further information can be found at the LHC@home message board.
[2026-01-09 22:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:47:47] Checking for apptainer binary...
[2026-01-09 22:47:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:47:47] Running /usr/bin/apptainer --version
[2026-01-09 22:47:47] apptainer version 1.4.5-2.el9
[2026-01-09 22:47:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:47:47] c6-12-29-3.aglt2.org
[2026-01-09 22:47:47] apptainer works
[2026-01-09 22:47:47] Set ATHENA_PROC_NUMBER=9
[2026-01-09 22:47:47] Set ATHENA_CORE_NUMBER=9
[2026-01-09 22:47:47] Starting ATLAS job with PandaID=6963157506
[2026-01-09 22:47:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:21:46]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:21:46] 2026-01-10 09:21:10,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:21:46] 2026-01-10 09:21:11,533 | INFO     | time since job start (19992s) is within the limit (349056.0s)
[2026-01-10 04:21:46] 2026-01-10 09:21:12,296 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 04:21:46] 2026-01-10 09:21:12,317 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2669.314020833334
[2026-01-10 04:21:46] 2026-01-10 09:21:12,417 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963157506/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:21:46] 2026-01-10 09:21:12,418 | INFO     | extracted standard info from prmon json
[2026-01-10 04:21:46] 2026-01-10 09:21:12,418 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:21:46] 2026-01-10 09:21:12,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:21:46] 2026-01-10 09:21:12,422 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 04:21:46] 2026-01-10 09:21:12,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 04:21:46] 2026-01-10 09:21:12,449 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:21:46] 2026-01-10 09:21:12,461 | INFO     | sum of square deviations: 10843431016.868567
[2026-01-10 04:21:46] 2026-01-10 09:21:12,464 | INFO     | sum of deviations: 83919404366.529
[2026-01-10 04:21:46] 2026-01-10 09:21:12,464 | INFO     | mean x: 1768026852.235474
[2026-01-10 04:21:46] 2026-01-10 09:21:12,464 | INFO     | mean y: 2531828.006116208
[2026-01-10 04:21:46] 2026-01-10 09:21:12,464 | INFO     | intersect: -13680569038.575308
[2026-01-10 04:21:46] 2026-01-10 09:21:12,484 | INFO     | chi2: 1.520451957166736
[2026-01-10 04:21:46] 2026-01-10 09:21:12,485 | INFO     | sum of square deviations: 10353608365.493828
[2026-01-10 04:21:46] 2026-01-10 09:21:12,509 | INFO     | sum of deviations: 81943415816.45343
[2026-01-10 04:21:46] 2026-01-10 09:21:12,509 | INFO     | mean x: 1768026699.7298136
[2026-01-10 04:21:46] 2026-01-10 09:21:12,509 | INFO     | mean y: 2531213.2236024844
[2026-01-10 04:21:46] 2026-01-10 09:21:12,509 | INFO     | intersect: -13990478944.799873
[2026-01-10 04:21:46] 2026-01-10 09:21:12,510 | INFO     | chi2: 1.5205775331929885
[2026-01-10 04:21:46] 2026-01-10 09:21:12,510 | INFO     | current chi2=1.5205775331929885 (change=-0.00825912490430859 %)
[2026-01-10 04:21:46] 2026-01-10 09:21:12,510 | INFO     | right removable region: 321
[2026-01-10 04:21:46] 2026-01-10 09:21:12,511 | INFO     | sum of square deviations: 10353621604.087029
[2026-01-10 04:21:46] 2026-01-10 09:21:12,534 | INFO     | sum of deviations: 28894188231.5652
[2026-01-10 04:21:46] 2026-01-10 09:21:12,535 | INFO     | mean x: 1768027004.7391305
[2026-01-10 04:21:46] 2026-01-10 09:21:12,535 | INFO     | mean y: 2548859.304347826
[2026-01-10 04:21:46] 2026-01-10 09:21:12,535 | INFO     | intersect: -4931541551.461397
[2026-01-10 04:21:46] 2026-01-10 09:21:12,535 | INFO     | chi2: 0.05564053586058978
[2026-01-10 04:21:46] 2026-01-10 09:21:12,536 | INFO     | current chi2=0.05564053586058978 (change=96.34052653894621 %)
[2026-01-10 04:21:46] 2026-01-10 09:21:12,557 | INFO     | sum of square deviations: 9878789216.296616
[2026-01-10 04:21:46] 2026-01-10 09:21:12,565 | INFO     | sum of deviations: 18695951916.06625
[2026-01-10 04:21:46] 2026-01-10 09:21:12,566 | INFO     | mean x: 1768027157.2429023
[2026-01-10 04:21:46] 2026-01-10 09:21:12,566 | INFO     | mean y: 2552118.362776025
[2026-01-10 04:21:46] 2026-01-10 09:21:12,566 | INFO     | intersect: -3343500722.1597514
[2026-01-10 04:21:46] 2026-01-10 09:21:12,566 | INFO     | chi2: 0.01441869790207602
[2026-01-10 04:21:46] 2026-01-10 09:21:12,566 | INFO     | current chi2=0.01441869790207602 (change=74.08598303545672 %)
[2026-01-10 04:21:46] 2026-01-10 09:21:12,596 | INFO     | sum of square deviations: 9418701290.996807
[2026-01-10 04:21:46] 2026-01-10 09:21:12,599 | INFO     | sum of deviations: 19120703904.282063
[2026-01-10 04:21:46] 2026-01-10 09:21:12,599 | INFO     | mean x: 1768027309.746795
[2026-01-10 04:21:46] 2026-01-10 09:21:12,599 | INFO     | mean y: 2551976.282051282
[2026-01-10 04:21:46] 2026-01-10 09:21:12,599 | INFO     | intersect: -3586682424.501783
[2026-01-10 04:21:46] 2026-01-10 09:21:12,599 | INFO     | chi2: 0.013770064459894918
[2026-01-10 04:21:46] 2026-01-10 09:21:12,600 | INFO     | current chi2=0.013770064459894918 (change=4.498557682436156 %)
[2026-01-10 04:21:46] 2026-01-10 09:21:12,623 | INFO     | left removable region: 30
[2026-01-10 04:21:46] 2026-01-10 09:21:12,623 | INFO     | sum of square deviations: 7642076714.687267
[2026-01-10 04:21:46] 2026-01-10 09:21:12,626 | INFO     | sum of deviations: 22507747476.5086
[2026-01-10 04:21:46] 2026-01-10 09:21:12,626 | INFO     | mean x: 1768027584.250859
[2026-01-10 04:21:46] 2026-01-10 09:21:12,626 | INFO     | mean y: 2549985.965635739
[2026-01-10 04:21:46] 2026-01-10 09:21:12,626 | INFO     | intersect: -5204714987.093242
[2026-01-10 04:21:46] 2026-01-10 09:21:12,626 | INFO     | chi2: 0.004063898459654799
[2026-01-10 04:21:46] 2026-01-10 09:21:12,653 | INFO     | current memory leak: 2.95 B/s (using 291 data points, chi2=0.00)
[2026-01-10 04:21:46] 2026-01-10 09:21:12,654 | INFO     | could have reported an average CPU frequency of 2618 MHz (14 samples)
[2026-01-10 04:21:46] 2026-01-10 09:21:12,654 | INFO     | ..............................
[2026-01-10 04:21:46] 2026-01-10 09:21:12,654 | INFO     | . Timing measurements:
[2026-01-10 04:21:46] 2026-01-10 09:21:12,654 | INFO     | . get job = 0 s
[2026-01-10 04:21:46] 2026-01-10 09:21:12,654 | INFO     | . initial setup = 1 s
[2026-01-10 04:21:46] 2026-01-10 09:21:12,655 | INFO     | . payload setup = 7 s
[2026-01-10 04:21:46] 2026-01-10 09:21:12,655 | INFO     | . stage-in = 0 s
[2026-01-10 04:21:46] 2026-01-10 09:21:12,655 | INFO     | . payload execution = 19944 s
[2026-01-10 04:21:46] 2026-01-10 09:21:12,655 | INFO     | . stage-out = 3 s
[2026-01-10 04:21:46] 2026-01-10 09:21:12,655 | INFO     | . log creation = 0 s
[2026-01-10 04:21:46] 2026-01-10 09:21:12,655 | INFO     | ..............................
[2026-01-10 04:21:46] 2026-01-10 09:21:13,184 | INFO     | 
[2026-01-10 04:21:46] 2026-01-10 09:21:13,184 | INFO     | job summary report
[2026-01-10 04:21:46] 2026-01-10 09:21:13,184 | INFO     | --------------------------------------------------
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | PanDA job id: 6963157506
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | task id: 47898826
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | errors: (none)
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | pilot state: finished 
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | transexitcode: 0
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | exeerrorcode: 0
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | exeerrordiag: 
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | exitcode: 0
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | exitmsg: OK
[2026-01-10 04:21:46] 2026-01-10 09:21:13,185 | INFO     | cpuconsumptiontime: 64340 s
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | nevents: 400
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | neventsw: 0
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | pid: 1303381
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | pgrp: 1303381
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | corecount: 9
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | event service: False
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 19955: 2317483, 19956: 2317482, 19960: 2326536, 19962: 2326720, 19977: 2326942}
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | --------------------------------------------------
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | 
[2026-01-10 04:21:46] 2026-01-10 09:21:13,186 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 04:21:46] 2026-01-10 09:21:13,210 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,210 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,210 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:21:46] 2026-01-10 09:21:13,212 | INFO     | job 6963157506 has completed (purged errors)
[2026-01-10 04:21:46] 2026-01-10 09:21:13,213 | INFO     | overall cleanup function is called
[2026-01-10 04:21:46] 2026-01-10 09:21:14,222 | INFO     | --- collectZombieJob: --- 10, [1303381]
[2026-01-10 04:21:46] 2026-01-10 09:21:14,222 | INFO     | zombie collector waiting for pid 1303381
[2026-01-10 04:21:46] 2026-01-10 09:21:14,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:21:46] 2026-01-10 09:21:14,222 | INFO     | collected zombie processes
[2026-01-10 04:21:46] 2026-01-10 09:21:14,222 | INFO     | will attempt to kill all subprocesses of pid=1303381
[2026-01-10 04:21:46] 2026-01-10 09:21:15,959 | INFO     | process IDs to be killed: [1303381] (in reverse order)
[2026-01-10 04:21:46] 2026-01-10 09:21:16,223 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:21:46] 2026-01-10 09:21:16,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:21:46] 2026-01-10 09:21:16,275 | INFO     | did not find any defunct processes belonging to 1303381
[2026-01-10 04:21:46] 2026-01-10 09:21:16,341 | INFO     | did not find any defunct processes belonging to 1303381
[2026-01-10 04:21:46] 2026-01-10 09:21:16,342 | INFO     | ready for new job
[2026-01-10 04:21:46] 2026-01-10 09:21:16,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:21:46] 2026-01-10 09:21:16,344 | INFO     | ***************************************
[2026-01-10 04:21:46] 2026-01-10 09:21:16,344 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:21:46] 2026-01-10 09:21:16,345 | INFO     | ***************************************
[2026-01-10 04:21:46] 2026-01-10 09:21:16,345 | INFO     | 
[2026-01-10 04:21:46] 2026-01-10 09:21:16,351 | INFO     | architecture information:
[2026-01-10 04:21:46] 2026-01-10 09:21:16,351 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:21:46] 2026-01-10 09:21:16,372 | INFO     | cat /etc/os-release:
[2026-01-10 04:21:46] NAME="CentOS Linux"
[2026-01-10 04:21:46] VERSION="7 (Core)"
[2026-01-10 04:21:46] ID="centos"
[2026-01-10 04:21:46] ID_LIKE="rhel fedora"
[2026-01-10 04:21:46] VERSION_ID="7"
[2026-01-10 04:21:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:21:46] ANSI_COLOR="0;31"
[2026-01-10 04:21:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:21:46] HOME_URL="https://www.centos.org/"
[2026-01-10 04:21:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:21:46] 
[2026-01-10 04:21:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:21:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:21:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:21:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:21:46] 
[2026-01-10 04:21:46] 2026-01-10 09:21:16,372 | INFO     | ***************************************
[2026-01-10 04:21:46] 2026-01-10 09:21:16,894 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 04:21:46] 2026-01-10 09:21:17,008 | INFO     | sufficient remaining disk space (94724161536 B)
[2026-01-10 04:21:46] 2026-01-10 09:21:17,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:21:46] 2026-01-10 09:21:17,008 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:21:46] 2026-01-10 09:21:17,008 | INFO     | update_server=False
[2026-01-10 04:21:46] 2026-01-10 09:21:17,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:21:46] 2026-01-10 09:21:17,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:21:46] 2026-01-10 09:21:17,009 | INFO     | aborting loop
[2026-01-10 04:21:46] 2026-01-10 09:21:17,170 | INFO     | all data control threads have been joined
[2026-01-10 04:21:46] 2026-01-10 09:21:17,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:21:46] 2026-01-10 09:21:17,392 | INFO     | all payload control threads have been joined
[2026-01-10 04:21:46] 2026-01-10 09:21:17,574 | INFO     | all job control threads have been joined
[2026-01-10 04:21:46] 2026-01-10 09:21:18,014 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,017 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,021 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,178 | INFO     | [data] control thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,190 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:21:46] 2026-01-10 09:21:18,398 | INFO     | [payload] control thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:21:46] 2026-01-10 09:21:18,580 | INFO     | [job] control thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,580 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,674 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,787 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:18,920 | INFO     | [job] validate thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:19,134 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:19,143 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:19,212 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:20,468 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:21,190 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:21:46] 2026-01-10 09:21:32,933 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:21:46] 2026-01-10 09:21:34,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629815072576)>', '<ExcThread(monitor, started 140629468227328)>']
[2026-01-10 04:21:46] 2026-01-10 09:21:39,817 | INFO     | all workflow threads have been joined
[2026-01-10 04:21:46] 2026-01-10 09:21:39,817 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:21:46] 2026-01-10 09:21:39,817 | INFO     | traces error code: 0
[2026-01-10 04:21:46] 2026-01-10 09:21:39,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:21:46] 2026-01-10 09:21:45,733 | INFO     | PID=1278514 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 04:21:46] 2026-01-10 09:21:45,733 | INFO     | .. there are 16 such processes running
[2026-01-10 04:21:46] 2026-01-10 09:21:45,734 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:21:46] 2026-01-10 09:21:45,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:21:46] 2026-01-10 09:21:45,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:21:46] 2026-01-10 09:21:45,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:21:46] 2026-01-10 09:21:45,734 | INFO     | [monitor] control thread has ended
[2026-01-10 04:21:46] 2026-01-10 09:21:45,950 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:21:46] 2026-01-10 09:21:45,953 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:21:46] 2026-01-10 09:21:45,963 [wrapper] pilotpid: 1278514
[2026-01-10 04:21:46] 2026-01-10 09:21:45,995 [wrapper] Pilot exit status: 0
[2026-01-10 04:21:46] 2026-01-10 09:21:46,099 [wrapper] pandaids: 6963157506 6963157506
[2026-01-10 04:21:46] 2026-01-10 09:21:46,196 [wrapper] cleanup supervisor_pilot 2039562 1278515
[2026-01-10 04:21:46] 2026-01-10 09:21:46,252 [wrapper] Test setup, not cleaning
[2026-01-10 04:21:46] 2026-01-10 09:21:46,286 [wrapper] apfmon messages muted
[2026-01-10 04:21:46] 2026-01-10 09:21:46,304 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:21:46] 2026-01-10 09:21:46,330 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:21:46]  *** Error codes and diagnostics ***
[2026-01-10 04:21:46]     "exeErrorCode": 0,
[2026-01-10 04:21:46]     "exeErrorDiag": "",
[2026-01-10 04:21:46]     "pilotErrorCode": 0,
[2026-01-10 04:21:46]     "pilotErrorDiag": "",
[2026-01-10 04:21:46]  *** Listing of results directory ***
[2026-01-10 04:21:46] total 672968
[2026-01-10 04:21:46] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:45 queuedata.json
[2026-01-10 04:21:46] -rwx------. 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:21:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:10 run_atlas
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:10 job.xml
[2026-01-10 04:21:46] -rw-r--r--. 3 boincer umatlas 226484066 Jan  9 21:10 EVNT.47898824._001250.pool.root.1
[2026-01-10 04:21:46] -rw-r--r--. 3 boincer umatlas 226484066 Jan  9 21:10 ATLAS.root_0
[2026-01-10 04:21:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:10 start_atlas.sh
[2026-01-10 04:21:46] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:10 shared
[2026-01-10 04:21:46] -rw-r--r--. 2 boincer umatlas    592406 Jan  9 21:10 input.tar.gz
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:10 boinc_lockfile
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 22:47 pandaJob.out
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas        57 Jan  9 22:47 setup.sh.local
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas    989374 Jan  9 22:47 agis_schedconf.cvmfs.json
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas 225695520 Jan 10 04:20 HITS.47898826._032367.pool.root.1
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas       531 Jan 10 04:20 boinc_task_state.xml
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas      1048 Jan 10 04:20 memory_monitor_summary.json
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas        96 Jan 10 04:20 pilot_heartbeat.json
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas    563016 Jan 10 04:20 log.47898826._032367.job.log.tgz.1
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas      7844 Jan 10 04:21 heartbeat.json
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas      6879 Jan 10 04:21 init_data.xml
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 04:21 boinc_mmap_file
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas        28 Jan 10 04:21 wrapper_checkpoint.txt
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas       823 Jan 10 04:21 pilotlog.txt
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas   2704101 Jan 10 04:21 log.47898826._032367.job.log.1
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas       357 Jan 10 04:21 output.list
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:21 runtime_log
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas   3287040 Jan 10 04:21 result.tar.gz
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas       787 Jan 10 04:21 v3oMDmd0Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDEgKDmpyrACo.diag
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas      9438 Jan 10 04:21 runtime_log.err
[2026-01-10 04:21:46] -rw-r--r--. 1 boincer umatlas     23494 Jan 10 04:21 stderr.txt
[2026-01-10 04:21:46] HITS file was successfully produced:
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas 225695520 Jan 10 04:20 shared/HITS.pool.root.1
[2026-01-10 04:21:46]  *** Contents of shared directory: ***
[2026-01-10 04:21:46] total 445400
[2026-01-10 04:21:46] -rw-r--r--. 3 boincer umatlas 226484066 Jan  9 21:10 ATLAS.root_0
[2026-01-10 04:21:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:10 start_atlas.sh
[2026-01-10 04:21:46] -rw-r--r--. 2 boincer umatlas    592406 Jan  9 21:10 input.tar.gz
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas 225695520 Jan 10 04:20 HITS.pool.root.1
[2026-01-10 04:21:46] -rw-------. 1 boincer umatlas   3287040 Jan 10 04:21 result.tar.gz
04:21:48 (1263882): run_atlas exited; CPU time 65087.469880
04:21:48 (1263882): called boinc_finish(0)

</stderr_txt>
]]>

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