Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:19:48 (2520305): wrapper (7.7.26015): starting
14:19:48 (2520305): wrapper: running run_atlas (--nthreads 10)
[2026-01-09 14:19:48] Arguments: --nthreads 10
[2026-01-09 14:19:48] Threads: 10
[2026-01-09 14:19:48] Checking for CVMFS
[2026-01-09 14:19:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:19:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:19:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:19:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:19:50] 2.13.3.0 9597 23069 124880 154955 2 105 21028233 40960001 29682 16776704 0 110099395 99.654 97573791 46932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:19:50] CVMFS is ok
[2026-01-09 14:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:19:50] Further information can be found at the LHC@home message board.
[2026-01-09 14:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:19:50] Checking for apptainer binary...
[2026-01-09 14:19:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:19:50] Running /usr/bin/apptainer --version
[2026-01-09 14:19:50] apptainer version 1.4.5-2.el9
[2026-01-09 14:19:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:19:51] c-208-38.aglt2.org
[2026-01-09 14:19:51] apptainer works
[2026-01-09 14:19:51] Set ATHENA_PROC_NUMBER=10
[2026-01-09 14:19:51] Set ATHENA_CORE_NUMBER=10
[2026-01-09 14:19:51] Starting ATLAS job with PandaID=6963188938
[2026-01-09 14:19:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:35:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:35:11] 2026-01-09 21:34:29,972 | INFO     | monitor loop #513: job 0:6963188938 is in state 'finished'
[2026-01-09 16:35:11] 2026-01-09 21:34:29,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:35:11] 2026-01-09 21:34:31,487 | INFO     | time since job start (8025s) is within the limit (349056.0s)
[2026-01-09 16:35:11] 2026-01-09 21:34:32,489 | INFO     | monitor loop #514: job 0:6963188938 is in state 'finished'
[2026-01-09 16:35:11] 2026-01-09 21:34:32,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:35:11] 2026-01-09 21:34:33,494 | INFO     | time since job start (8027s) is within the limit (349056.0s)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,008 | INFO     | monitor loop #515: job 0:6963188938 is in state 'finished'
[2026-01-09 16:35:11] 2026-01-09 21:34:35,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,511 | INFO     | time since job start (8029s) is within the limit (349056.0s)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,609 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 16:35:11] 2026-01-09 21:34:35,629 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.989085937501
[2026-01-09 16:35:11] 2026-01-09 21:34:35,650 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188938/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,650 | INFO     | extracted standard info from prmon json
[2026-01-09 16:35:11] 2026-01-09 21:34:35,650 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:35:11] 2026-01-09 21:34:35,650 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:35:11] 2026-01-09 21:34:35,650 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:35:11] 2026-01-09 21:34:35,650 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:35:11] 2026-01-09 21:34:35,652 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:35:11] 2026-01-09 21:34:35,652 | INFO     | sum of square deviations: 665630908.6201546
[2026-01-09 16:35:11] 2026-01-09 21:34:35,652 | INFO     | sum of deviations: 1772535841.465107
[2026-01-09 16:35:11] 2026-01-09 21:34:35,652 | INFO     | mean x: 1767990476.0542636
[2026-01-09 16:35:11] 2026-01-09 21:34:35,652 | INFO     | mean y: 2653364.7906976743
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | intersect: -4705400972.216468
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | chi2: 2.133480574474229
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | sum of square deviations: 591194438.6048379
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | sum of deviations: 2258079786.451612
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | mean x: 1767990323.5564516
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | mean y: 2654359.935483871
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | intersect: -6750222446.020652
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | chi2: 2.1367321455933768
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | current chi2=2.1367321455933768 (change=-0.15240687719638393 %)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,653 | INFO     | right removable region: 123
[2026-01-09 16:35:11] 2026-01-09 21:34:35,660 | INFO     | sum of square deviations: 591190168.6048379
[2026-01-09 16:35:11] 2026-01-09 21:34:35,660 | INFO     | sum of deviations: -24166727982.024197
[2026-01-09 16:35:11] 2026-01-09 21:34:35,660 | INFO     | mean x: 1767990628.5564516
[2026-01-09 16:35:11] 2026-01-09 21:34:35,660 | INFO     | mean y: 2705691.2177419355
[2026-01-09 16:35:11] 2026-01-09 21:34:35,660 | INFO     | intersect: 72274794883.63959
[2026-01-09 16:35:11] 2026-01-09 21:34:35,660 | INFO     | chi2: 0.07469723836440355
[2026-01-09 16:35:11] 2026-01-09 21:34:35,660 | INFO     | current chi2=0.07469723836440355 (change=96.49880860139486 %)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,660 | INFO     | sum of square deviations: 522516978.5882368
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | sum of deviations: -20958901281.35294
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | mean x: 1767990781.0588236
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | mean y: 2698445.6218487397
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | intersect: 70919330373.3947
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | chi2: 0.05905329408504676
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | current chi2=0.05905329408504676 (change=20.943136080934153 %)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | left removable region: 20
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | sum of square deviations: 338823529.65048474
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | sum of deviations: -13043241718.84466
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | mean x: 1767990903.0582523
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | mean y: 2684504.640776699
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | intersect: 68062694177.213554
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | chi2: 0.044279193771702405
[2026-01-09 16:35:11] 2026-01-09 21:34:35,661 | INFO     | current memory leak: -38.50 B/s (using 103 data points, chi2=0.04)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | could have reported an average CPU frequency of 3797 MHz (8 samples)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | ..............................
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | . Timing measurements:
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | . get job = 0 s
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | . initial setup = 4 s
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | . payload setup = 41 s
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | . stage-in = 0 s
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | . payload execution = 7888 s
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | . stage-out = 2 s
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | . log creation = 0 s
[2026-01-09 16:35:11] 2026-01-09 21:34:35,662 | INFO     | ..............................
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | 
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | job summary report
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | --------------------------------------------------
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | PanDA job id: 6963188938
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | task id: 47898826
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | errors: (none)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | pilot state: finished 
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | transexitcode: 0
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | exeerrorcode: 0
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | exeerrordiag: 
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | exitcode: 0
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | exitmsg: OK
[2026-01-09 16:35:11] 2026-01-09 21:34:35,790 | INFO     | cpuconsumptiontime: 32219 s
[2026-01-09 16:35:11] 2026-01-09 21:34:35,794 | INFO     | nevents: 400
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | neventsw: 0
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | pid: 2538477
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | pgrp: 2538477
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | corecount: 10
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | event service: False
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | sizes: {0: 2283969, 11: 2283969, 22: 2283997, 30: 2284287, 33: 2284315, 7934: 2312118, 7937: 2321172, 7969: 2321310}
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | --------------------------------------------------
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | 
[2026-01-09 16:35:11] 2026-01-09 21:34:35,795 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | job 6963188938 has completed (purged errors)
[2026-01-09 16:35:11] 2026-01-09 21:34:35,940 | INFO     | overall cleanup function is called
[2026-01-09 16:35:11] 2026-01-09 21:34:36,979 | INFO     | --- collectZombieJob: --- 10, [2538477]
[2026-01-09 16:35:11] 2026-01-09 21:34:36,979 | INFO     | zombie collector waiting for pid 2538477
[2026-01-09 16:35:11] 2026-01-09 21:34:36,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:35:11] 2026-01-09 21:34:36,979 | INFO     | collected zombie processes
[2026-01-09 16:35:11] 2026-01-09 21:34:36,979 | INFO     | will attempt to kill all subprocesses of pid=2538477
[2026-01-09 16:35:11] 2026-01-09 21:34:38,024 | INFO     | process IDs to be killed: [2538477] (in reverse order)
[2026-01-09 16:35:11] 2026-01-09 21:34:38,662 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:35:11] 2026-01-09 21:34:38,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:35:11] 2026-01-09 21:34:38,772 | INFO     | did not find any defunct processes belonging to 2538477
[2026-01-09 16:35:11] 2026-01-09 21:34:38,872 | INFO     | did not find any defunct processes belonging to 2538477
[2026-01-09 16:35:11] 2026-01-09 21:34:38,872 | INFO     | ready for new job
[2026-01-09 16:35:11] 2026-01-09 21:34:38,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:35:11] 2026-01-09 21:34:38,886 | INFO     | ***************************************
[2026-01-09 16:35:11] 2026-01-09 21:34:38,886 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:35:11] 2026-01-09 21:34:38,886 | INFO     | ***************************************
[2026-01-09 16:35:11] 2026-01-09 21:34:38,886 | INFO     | 
[2026-01-09 16:35:11] 2026-01-09 21:34:38,906 | INFO     | architecture information:
[2026-01-09 16:35:11] 2026-01-09 21:34:38,910 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:35:11] 2026-01-09 21:34:39,016 | INFO     | cat /etc/os-release:
[2026-01-09 16:35:11] NAME="CentOS Linux"
[2026-01-09 16:35:11] VERSION="7 (Core)"
[2026-01-09 16:35:11] ID="centos"
[2026-01-09 16:35:11] ID_LIKE="rhel fedora"
[2026-01-09 16:35:11] VERSION_ID="7"
[2026-01-09 16:35:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:35:11] ANSI_COLOR="0;31"
[2026-01-09 16:35:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:35:11] HOME_URL="https://www.centos.org/"
[2026-01-09 16:35:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:35:11] 
[2026-01-09 16:35:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:35:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:35:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:35:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:35:11] 
[2026-01-09 16:35:11] 2026-01-09 21:34:39,016 | INFO     | ***************************************
[2026-01-09 16:35:11] 2026-01-09 21:34:39,520 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 16:35:11] 2026-01-09 21:34:39,558 | INFO     | sufficient remaining disk space (169155231744 B)
[2026-01-09 16:35:11] 2026-01-09 21:34:39,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:35:11] 2026-01-09 21:34:39,558 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:35:11] 2026-01-09 21:34:39,558 | INFO     | update_server=False
[2026-01-09 16:35:11] 2026-01-09 21:34:39,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:35:11] 2026-01-09 21:34:39,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:35:11] 2026-01-09 21:34:39,559 | INFO     | aborting loop
[2026-01-09 16:35:11] 2026-01-09 21:34:39,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:35:11] 2026-01-09 21:34:39,709 | INFO     | all payload control threads have been joined
[2026-01-09 16:35:11] 2026-01-09 21:34:39,876 | INFO     | all data control threads have been joined
[2026-01-09 16:35:11] 2026-01-09 21:34:40,565 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:40,569 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:40,607 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:40,634 | INFO     | [job] validate thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:40,716 | INFO     | [payload] control thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:40,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:35:11] 2026-01-09 21:34:40,883 | INFO     | [data] control thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:41,066 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:41,122 | INFO     | all job control threads have been joined
[2026-01-09 16:35:11] 2026-01-09 21:34:41,171 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:41,521 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:41,571 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:41,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:35:11] 2026-01-09 21:34:41,784 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:41,820 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:41,927 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:42,064 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:42,129 | INFO     | [job] control thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:45,641 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:35:11] 2026-01-09 21:34:58,706 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:35:11] 2026-01-09 21:34:59,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041042544448)>', '<ExcThread(monitor, started 140040671840000)>']
[2026-01-09 16:35:11] 2026-01-09 21:35:04,830 | INFO     | all workflow threads have been joined
[2026-01-09 16:35:11] 2026-01-09 21:35:04,831 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:35:11] 2026-01-09 21:35:04,832 | INFO     | traces error code: 0
[2026-01-09 16:35:11] 2026-01-09 21:35:04,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:35:11] 2026-01-09 21:35:10,417 | INFO     | PID=2527249 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:35:11] 2026-01-09 21:35:10,417 | INFO     | .. there are 27 such processes running
[2026-01-09 16:35:11] 2026-01-09 21:35:10,417 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:35:11] 2026-01-09 21:35:10,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:35:11] 2026-01-09 21:35:10,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:35:11] 2026-01-09 21:35:10,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:35:11] 2026-01-09 21:35:10,418 | INFO     | [monitor] control thread has ended
[2026-01-09 16:35:11] 2026-01-09 21:35:10,573 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:35:11] 2026-01-09 21:35:10,613 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:35:11] 2026-01-09 21:35:10,689 [wrapper] pilotpid: 2527249
[2026-01-09 16:35:11] 2026-01-09 21:35:10,714 [wrapper] Pilot exit status: 0
[2026-01-09 16:35:11] 2026-01-09 21:35:10,816 [wrapper] pandaids: 6963188938
[2026-01-09 16:35:11] 2026-01-09 21:35:11,229 [wrapper] cleanup supervisor_pilot 3104707 2527250
[2026-01-09 16:35:11] 2026-01-09 21:35:11,267 [wrapper] Test setup, not cleaning
[2026-01-09 16:35:11] 2026-01-09 21:35:11,292 [wrapper] apfmon messages muted
[2026-01-09 16:35:11] 2026-01-09 21:35:11,322 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:35:11] 2026-01-09 21:35:11,349 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:35:11]  *** Error codes and diagnostics ***
[2026-01-09 16:35:11]     "exeErrorCode": 0,
[2026-01-09 16:35:11]     "exeErrorDiag": "",
[2026-01-09 16:35:11]     "pilotErrorCode": 0,
[2026-01-09 16:35:11]     "pilotErrorDiag": "",
[2026-01-09 16:35:11]  *** Listing of results directory ***
[2026-01-09 16:35:11] total 443724
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 16:35:11] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:35:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:19 run_atlas
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:19 job.xml
[2026-01-09 16:35:11] -rw-r--r--. 2 boincer umatlas 224370675 Jan  9 14:19 EVNT.47898824._001454.pool.root.1
[2026-01-09 16:35:11] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 14:19 input.tar.gz
[2026-01-09 16:35:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:19 start_atlas.sh
[2026-01-09 16:35:11] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:19 shared
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:19 boinc_lockfile
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 14:19 pandaJob.out
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas        57 Jan  9 14:19 setup.sh.local
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas    989364 Jan  9 14:20 agis_schedconf.cvmfs.json
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:20 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:35:11] drwx------. 5 boincer umatlas      4096 Jan  9 14:20 pilot3
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas      7184 Jan  9 16:31 init_data.xml
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas 223235680 Jan  9 16:33 HITS.47898826._037875.pool.root.1
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas       530 Jan  9 16:33 boinc_task_state.xml
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas      1033 Jan  9 16:33 memory_monitor_summary.json
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas    386888 Jan  9 16:34 log.47898826._037875.job.log.tgz.1
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas        95 Jan  9 16:34 pilot_heartbeat.json
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas      7772 Jan  9 16:34 heartbeat.json
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas        27 Jan  9 16:35 wrapper_checkpoint.txt
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas       823 Jan  9 16:35 pilotlog.txt
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas   1042477 Jan  9 16:35 log.47898826._037875.job.log.1
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas       357 Jan  9 16:35 output.list
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:35 runtime_log
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas   1443840 Jan  9 16:35 result.tar.gz
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas      9344 Jan  9 16:35 runtime_log.err
[2026-01-09 16:35:11] -rw-------. 1 boincer umatlas       655 Jan  9 16:35 PETLDm1BJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnsgKDmE9CKWm.diag
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas     21418 Jan  9 16:35 stderr.txt
[2026-01-09 16:35:11] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:35 boinc_mmap_file
[2026-01-09 16:35:12] HITS file was successfully produced:
[2026-01-09 16:35:12] -rw-------. 1 boincer umatlas 223235680 Jan  9 16:33 shared/HITS.pool.root.1
[2026-01-09 16:35:12]  *** Contents of shared directory: ***
[2026-01-09 16:35:12] total 439132
[2026-01-09 16:35:12] -rw-r--r--. 2 boincer umatlas 224370675 Jan  9 14:19 ATLAS.root_0
[2026-01-09 16:35:12] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 14:19 input.tar.gz
[2026-01-09 16:35:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:19 start_atlas.sh
[2026-01-09 16:35:12] -rw-------. 1 boincer umatlas 223235680 Jan  9 16:33 HITS.pool.root.1
[2026-01-09 16:35:12] -rw-------. 1 boincer umatlas   1443840 Jan  9 16:35 result.tar.gz
16:35:34 (2520305): run_atlas exited; CPU time 32460.906745
16:35:34 (2520305): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN