Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:08:09 (233095): wrapper (7.7.26015): starting
08:08:09 (233095): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 08:08:09] Arguments: --nthreads 3
[2026-01-10 08:08:09] Threads: 3
[2026-01-10 08:08:09] Checking for CVMFS
[2026-01-10 08:08:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:08:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:08:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:08:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:08:09] 2.9.2.0 3607278 3423 86640 154971 0 56 16105831 36864001 0 130560 0 2091264 99.987 134522 7528 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 08:08:09] CVMFS is ok
[2026-01-10 08:08:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:08:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:08:09] Further information can be found at the LHC@home message board.
[2026-01-10 08:08:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:08:09] Checking for apptainer binary...
[2026-01-10 08:08:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:08:09] Running /usr/bin/apptainer --version
[2026-01-10 08:08:09] apptainer version 1.4.1-1.1
[2026-01-10 08:08:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:08:10] thA312
[2026-01-10 08:08:10] apptainer works
[2026-01-10 08:08:10] Set ATHENA_PROC_NUMBER=3
[2026-01-10 08:08:10] Set ATHENA_CORE_NUMBER=3
[2026-01-10 08:08:10] Starting ATLAS job with PandaID=6963153896
[2026-01-10 08:08:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:08:46]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:08:46] ID="centos"
[2026-01-10 10:08:46] ID_LIKE="rhel fedora"
[2026-01-10 10:08:46] VERSION_ID="7"
[2026-01-10 10:08:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:08:46] ANSI_COLOR="0;31"
[2026-01-10 10:08:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:08:46] HOME_URL="https://www.centos.org/"
[2026-01-10 10:08:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:08:46] 
[2026-01-10 10:08:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:08:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:08:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:08:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:08:46] 
[2026-01-10 10:08:46] 2026-01-10 09:08:16,385 | INFO     | ***************************************
[2026-01-10 10:08:46] 2026-01-10 09:08:16,888 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 10:08:46] 2026-01-10 09:08:16,901 | INFO     | sufficient remaining disk space (344300978176 B)
[2026-01-10 10:08:46] 2026-01-10 09:08:16,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:08:46] 2026-01-10 09:08:16,901 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:08:46] 2026-01-10 09:08:16,901 | INFO     | update_server=False
[2026-01-10 10:08:46] 2026-01-10 09:08:16,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:08:46] 2026-01-10 09:08:16,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:08:46] 2026-01-10 09:08:16,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:08:46] 2026-01-10 09:08:17,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:08:46] 2026-01-10 09:08:17,262 | INFO     | aborting loop
[2026-01-10 10:08:46] 2026-01-10 09:08:17,511 | INFO     | all job control threads have been joined
[2026-01-10 10:08:46] 2026-01-10 09:08:17,716 | INFO     | all data control threads have been joined
[2026-01-10 10:08:46] 2026-01-10 09:08:17,907 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:17,907 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,073 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,123 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,188 | INFO     | all payload control threads have been joined
[2026-01-10 10:08:46] 2026-01-10 09:08:18,267 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,477 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,517 | INFO     | [job] control thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,612 | INFO     | [job] validate thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,641 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,721 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,721 | INFO     | [data] control thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,907 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:18,913 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:19,194 | INFO     | [payload] control thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:19,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:08:46] 2026-01-10 09:08:19,352 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:23,300 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:08:46] 2026-01-10 09:08:24,430 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:08:46] 2026-01-10 09:08:25,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294122764096)>', '<ExcThread(monitor, started 140293311534848)>']
[2026-01-10 10:08:46] 2026-01-10 09:08:30,058 | INFO     | all workflow threads have been joined
[2026-01-10 10:08:46] 2026-01-10 09:08:30,058 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:08:46] 2026-01-10 09:08:30,059 | INFO     | traces error code: 0
[2026-01-10 10:08:46] 2026-01-10 09:08:30,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:08:46] 2026-01-10 09:08:46,417 | INFO     | PID=236819 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 10:08:46] 2026-01-10 09:08:46,417 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:08:46] 2026-01-10 09:08:46,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:08:46] 2026-01-10 09:08:46,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:08:46] 2026-01-10 09:08:46,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:08:46] 2026-01-10 09:08:46,417 | INFO     | [monitor] control thread has ended
[2026-01-10 10:08:46] 2026-01-10 09:08:46,466 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:08:46] 2026-01-10 09:08:46,468 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:08:46] 2026-01-10 09:08:46,471 [wrapper] pilotpid: 236819
[2026-01-10 10:08:46] 2026-01-10 09:08:46,473 [wrapper] Pilot exit status: 0
[2026-01-10 10:08:46] 2026-01-10 09:08:46,480 [wrapper] pandaids: 6963153896
[2026-01-10 10:08:46] 2026-01-10 09:08:46,497 [wrapper] cleanup supervisor_pilot  260404 236820
[2026-01-10 10:08:46] 2026-01-10 09:08:46,500 [wrapper] Test setup, not cleaning
[2026-01-10 10:08:46] 2026-01-10 09:08:46,502 [wrapper] apfmon messages muted
[2026-01-10 10:08:46] 2026-01-10 09:08:46,505 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:08:46] 2026-01-10 09:08:46,507 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:08:46]  *** Error codes and diagnostics ***
[2026-01-10 10:08:46]     "exeErrorCode": 0,
[2026-01-10 10:08:46]     "exeErrorDiag": "",
[2026-01-10 10:08:46]     "pilotErrorCode": 0,
[2026-01-10 10:08:46]     "pilotErrorDiag": "",
[2026-01-10 10:08:46]  *** Listing of results directory ***
[2026-01-10 10:08:46] total 443104
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 10:08:46] -rwx------ 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc       100 Jan 10 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:08:46] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 08:08 run_atlas
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc       105 Jan 10 08:08 job.xml
[2026-01-10 10:08:46] -rw-r--r-- 2 boinc boinc 225875642 Jan 10 08:08 EVNT.47898824._001173.pool.root.1
[2026-01-10 10:08:46] -rw-r--r-- 2 boinc boinc    592394 Jan 10 08:08 input.tar.gz
[2026-01-10 10:08:46] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:08 start_atlas.sh
[2026-01-10 10:08:46] drwxrwx--x 2 boinc boinc      4096 Jan 10 08:08 shared
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:08 boinc_setup_complete
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc      6439 Jan 10 08:08 init_data.xml
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:08 boinc_lockfile
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc      2520 Jan 10 08:08 pandaJob.out
[2026-01-10 10:08:46] -rw------- 1 boinc boinc    989374 Jan 10 08:08 agis_schedconf.cvmfs.json
[2026-01-10 10:08:46] -rw------- 1 boinc boinc   1516240 Jan 10 08:08 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:08:46] drwx------ 5 boinc boinc      4096 Jan 10 08:08 pilot3
[2026-01-10 10:08:46] -rw------- 1 boinc boinc 221322695 Jan 10 10:07 HITS.47898826._030312.pool.root.1
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc       529 Jan 10 10:07 boinc_task_state.xml
[2026-01-10 10:08:46] -rw------- 1 boinc boinc        95 Jan 10 10:07 pilot_heartbeat.json
[2026-01-10 10:08:46] -rw------- 1 boinc boinc      1021 Jan 10 10:08 memory_monitor_summary.json
[2026-01-10 10:08:46] -rw------- 1 boinc boinc    285710 Jan 10 10:08 log.47898826._030312.job.log.tgz.1
[2026-01-10 10:08:46] -rw------- 1 boinc boinc      7759 Jan 10 10:08 heartbeat.json
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc        27 Jan 10 10:08 wrapper_checkpoint.txt
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc      8192 Jan 10 10:08 boinc_mmap_file
[2026-01-10 10:08:46] -rw------- 1 boinc boinc       746 Jan 10 10:08 pilotlog.txt
[2026-01-10 10:08:46] -rw------- 1 boinc boinc   1034114 Jan 10 10:08 log.47898826._030312.job.log.1
[2026-01-10 10:08:46] -rw------- 1 boinc boinc       357 Jan 10 10:08 output.list
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc       620 Jan 10 10:08 runtime_log
[2026-01-10 10:08:46] -rw------- 1 boinc boinc   1341440 Jan 10 10:08 result.tar.gz
[2026-01-10 10:08:46] -rw------- 1 boinc boinc       659 Jan 10 10:08 s3xNDmCZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmj4fKDm5naOFn.diag
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc      8897 Jan 10 10:08 runtime_log.err
[2026-01-10 10:08:46] -rw-r--r-- 1 boinc boinc      8620 Jan 10 10:08 stderr.txt
[2026-01-10 10:08:46] HITS file was successfully produced:
[2026-01-10 10:08:46] -rw------- 1 boinc boinc 221322695 Jan 10 10:07 shared/HITS.pool.root.1
[2026-01-10 10:08:46]  *** Contents of shared directory: ***
[2026-01-10 10:08:46] total 438636
[2026-01-10 10:08:46] -rw-r--r-- 2 boinc boinc 225875642 Jan 10 08:08 ATLAS.root_0
[2026-01-10 10:08:46] -rw-r--r-- 2 boinc boinc    592394 Jan 10 08:08 input.tar.gz
[2026-01-10 10:08:46] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:08 start_atlas.sh
[2026-01-10 10:08:46] -rw------- 1 boinc boinc 221322695 Jan 10 10:07 HITS.pool.root.1
[2026-01-10 10:08:46] -rw------- 1 boinc boinc   1341440 Jan 10 10:08 result.tar.gz
10:08:48 (233095): run_atlas exited; CPU time 20887.717177
10:08:48 (233095): called boinc_finish(0)

</stderr_txt>
]]>

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