Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
10:21:19 (599950): wrapper (7.7.26015): starting
10:21:19 (599950): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 10:21:19] Arguments: --nthreads 4
[2026-01-09 10:21:19] Threads: 4
[2026-01-09 10:21:19] Checking for CVMFS
[2026-01-09 10:21:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:21:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:21:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:21:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:21:20] 2.12.7.0 5258 767 57860 154952 1 49 5194042 6144001 1702 130560 0 1204473 99.995 24683 827 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 10:21:20] CVMFS is ok
[2026-01-09 10:21:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:21:21] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 10:21:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 10:21:21] Further information can be found at the LHC@home message board.
[2026-01-09 10:21:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:21:21] Checking for apptainer binary...
[2026-01-09 10:21:21] apptainer is not installed, using version from CVMFS
[2026-01-09 10:21:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:21:21] k8plus
[2026-01-09 10:21:21] apptainer works
[2026-01-09 10:21:21] Set ATHENA_PROC_NUMBER=4
[2026-01-09 10:21:21] Set ATHENA_CORE_NUMBER=4
[2026-01-09 10:21:21] Starting ATLAS job with PandaID=6963188347
[2026-01-09 10:21:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:36:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:36:52] 2026-01-09 20:36:01,964 | INFO     | executing command: lscpu
[2026-01-09 12:36:52] 2026-01-09 20:36:01,979 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 12:36:52] 2026-01-09 20:36:03,129 | INFO     | time since job start (8071s) is within the limit (349056.0s)
[2026-01-09 12:36:52] 2026-01-09 20:36:03,501 | INFO     | monitor loop #610: job 0:6963188347 is in state 'finished'
[2026-01-09 12:36:52] 2026-01-09 20:36:03,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,146 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 12:36:52] 2026-01-09 20:36:04,148 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4035.3339999999994
[2026-01-09 12:36:52] 2026-01-09 20:36:04,150 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6963188347/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,150 | INFO     | extracted standard info from prmon json
[2026-01-09 12:36:52] 2026-01-09 20:36:04,150 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:36:52] 2026-01-09 20:36:04,150 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:36:52] 2026-01-09 20:36:04,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:36:52] 2026-01-09 20:36:04,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:36:52] 2026-01-09 20:36:04,152 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:36:52] 2026-01-09 20:36:04,152 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,152 | INFO     | sum of deviations: -15372483150.500002
[2026-01-09 12:36:52] 2026-01-09 20:36:04,152 | INFO     | mean x: 1767986907.5
[2026-01-09 12:36:52] 2026-01-09 20:36:04,152 | INFO     | mean y: 2418544.7045454546
[2026-01-09 12:36:52] 2026-01-09 20:36:04,152 | INFO     | intersect: 38113193374.03458
[2026-01-09 12:36:52] 2026-01-09 20:36:04,152 | INFO     | chi2: 1.3039375354399274
[2026-01-09 12:36:52] 2026-01-09 20:36:04,152 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | sum of deviations: -14523740221.999998
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | mean x: 1767986755.0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | mean y: 2420204.2992125982
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | intersect: 40431589673.473434
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | chi2: 1.2989448405493547
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | current chi2=1.2989448405493547 (change=0.38289371652211024 %)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | right removable region: 126
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,153 | INFO     | sum of deviations: -23180397659.0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | mean x: 1767987060.0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | mean y: 2433088.842519685
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | intersect: 64528813529.854645
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | chi2: 0.23032194118026994
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | current chi2=0.23032194118026994 (change=82.33642832418633 %)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | sum of square deviations: 563026370.5
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | sum of deviations: -16657461326.500002
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | mean x: 1767987212.5
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | mean y: 2419282.893442623
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | intersect: 52309345141.111824
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | chi2: 0.19613191406576969
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | current chi2=0.19613191406576969 (change=14.844450745463355 %)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | left removable region: 20
[2026-01-09 12:36:52] 2026-01-09 20:36:04,154 | INFO     | sum of square deviations: 369281342.5
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | sum of deviations: -2733560730.9999995
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | mean x: 1767987334.5
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | mean y: 2386900.9433962265
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | intersect: 13089700540.393135
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | chi2: 0.03684345425310685
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | current memory leak: -7.40 B/s (using 106 data points, chi2=0.04)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | could have reported an average CPU frequency of 3919 MHz (8 samples)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | ..............................
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | . Timing measurements:
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | . get job = 0 s
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | . initial setup = 3 s
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | . payload setup = 3 s
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | . stage-in = 0 s
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | . payload execution = 8043 s
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | . stage-out = 0 s
[2026-01-09 12:36:52] 2026-01-09 20:36:04,155 | INFO     | . log creation = 0 s
[2026-01-09 12:36:52] 2026-01-09 20:36:04,156 | INFO     | ..............................
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | 
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | job summary report
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | --------------------------------------------------
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | PanDA job id: 6963188347
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | task id: 47898826
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | errors: (none)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | pilot state: finished 
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | transexitcode: 0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | exeerrorcode: 0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | exeerrordiag: 
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | exitcode: 0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | exitmsg: OK
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | cpuconsumptiontime: 31523 s
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | nevents: 400
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | neventsw: 0
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | pid: 610737
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | pgrp: 610737
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | corecount: 4
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | event service: False
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | sizes: {0: 2283801, 1: 2284000, 3: 2284262, 11: 2284290, 8049: 2312186, 8050: 2321198, 8053: 2321382, 8058: 2321576}
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | --------------------------------------------------
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | 
[2026-01-09 12:36:52] 2026-01-09 20:36:04,204 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-09 12:36:52] 2026-01-09 20:36:04,217 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 20:36:04,218 | INFO     | job 6963188347 has completed (purged errors)
[2026-01-09 12:36:52] 2026-01-09 20:36:04,219 | INFO     | overall cleanup function is called
[2026-01-09 12:36:52] 2026-01-09 20:36:05,222 | INFO     | --- collectZombieJob: --- 10, [610737]
[2026-01-09 12:36:52] 2026-01-09 20:36:05,222 | INFO     | zombie collector waiting for pid 610737
[2026-01-09 12:36:52] 2026-01-09 20:36:05,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:36:52] 2026-01-09 20:36:05,222 | INFO     | collected zombie processes
[2026-01-09 12:36:52] 2026-01-09 20:36:05,222 | INFO     | will attempt to kill all subprocesses of pid=610737
[2026-01-09 12:36:52] 2026-01-09 20:36:05,296 | INFO     | process IDs to be killed: [610737] (in reverse order)
[2026-01-09 12:36:52] 2026-01-09 20:36:05,334 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:36:52] 2026-01-09 20:36:05,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:36:52] 2026-01-09 20:36:05,337 | INFO     | did not find any defunct processes belonging to 610737
[2026-01-09 12:36:52] 2026-01-09 20:36:05,339 | INFO     | did not find any defunct processes belonging to 610737
[2026-01-09 12:36:52] 2026-01-09 20:36:05,340 | INFO     | ready for new job
[2026-01-09 12:36:52] 2026-01-09 20:36:05,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:36:52] 2026-01-09 20:36:05,341 | INFO     | ***************************************
[2026-01-09 12:36:52] 2026-01-09 20:36:05,341 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:36:52] 2026-01-09 20:36:05,341 | INFO     | ***************************************
[2026-01-09 12:36:52] 2026-01-09 20:36:05,341 | INFO     | 
[2026-01-09 12:36:52] 2026-01-09 20:36:05,341 | INFO     | architecture information:
[2026-01-09 12:36:52] 2026-01-09 20:36:05,342 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:36:52] 2026-01-09 20:36:05,350 | INFO     | cat /etc/os-release:
[2026-01-09 12:36:52] NAME="CentOS Linux"
[2026-01-09 12:36:52] VERSION="7 (Core)"
[2026-01-09 12:36:52] ID="centos"
[2026-01-09 12:36:52] ID_LIKE="rhel fedora"
[2026-01-09 12:36:52] VERSION_ID="7"
[2026-01-09 12:36:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:36:52] ANSI_COLOR="0;31"
[2026-01-09 12:36:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:36:52] HOME_URL="https://www.centos.org/"
[2026-01-09 12:36:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:36:52] 
[2026-01-09 12:36:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:36:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:36:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:36:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:36:52] 
[2026-01-09 12:36:52] 2026-01-09 20:36:05,350 | INFO     | ***************************************
[2026-01-09 12:36:52] 2026-01-09 20:36:05,853 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-09 12:36:52] 2026-01-09 20:36:05,865 | INFO     | sufficient remaining disk space (113764204544 B)
[2026-01-09 12:36:52] 2026-01-09 20:36:05,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:36:52] 2026-01-09 20:36:05,866 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:36:52] 2026-01-09 20:36:05,866 | INFO     | update_server=False
[2026-01-09 12:36:52] 2026-01-09 20:36:05,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:36:52] 2026-01-09 20:36:05,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:36:52] 2026-01-09 20:36:05,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:36:52] 2026-01-09 20:36:06,004 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:36:52] 2026-01-09 20:36:06,004 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:36:52] 2026-01-09 20:36:06,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:36:52] 2026-01-09 20:36:06,004 | INFO     | will abort loop
[2026-01-09 12:36:52] 2026-01-09 20:36:06,221 | INFO     | all payload control threads have been joined
[2026-01-09 12:36:52] 2026-01-09 20:36:06,847 | INFO     | all data control threads have been joined
[2026-01-09 12:36:52] 2026-01-09 20:36:06,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:36:52] 2026-01-09 20:36:06,871 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:06,871 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:07,009 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:07,226 | INFO     | [payload] control thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:07,303 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:07,430 | INFO     | all job control threads have been joined
[2026-01-09 12:36:52] 2026-01-09 20:36:07,659 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:07,853 | INFO     | [data] control thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:07,901 | INFO     | [job] validate thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:08,053 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:08,100 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:08,149 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:08,328 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:08,435 | INFO     | [job] control thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:08,877 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:09,872 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:16,318 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:36:52] 2026-01-09 20:36:17,323 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:36:52] 2026-01-09 20:36:29,316 [wrapper] supervise_pilot (15 min periods counter: 10)
[2026-01-09 12:36:52] 2026-01-09 20:36:36,286 | INFO     | PID=604123 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:36:52] 2026-01-09 20:36:36,286 | INFO     | .. there are 4 such processes running
[2026-01-09 12:36:52] 2026-01-09 20:36:36,286 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:36:52] 2026-01-09 20:36:36,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:36:52] 2026-01-09 20:36:36,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:36:52] 2026-01-09 20:36:45,797 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:36:52] 2026-01-09 20:36:47,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132560721725248)>', '<ExcThread(monitor, started 132560172594944)>']
[2026-01-09 12:36:52] 2026-01-09 20:36:48,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:36:52] 2026-01-09 20:36:48,334 | INFO     | [monitor] control thread has ended
[2026-01-09 12:36:52] 2026-01-09 20:36:52,678 | INFO     | all workflow threads have been joined
[2026-01-09 12:36:52] 2026-01-09 20:36:52,678 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:36:52] 2026-01-09 20:36:52,678 | INFO     | traces error code: 0
[2026-01-09 12:36:52] 2026-01-09 20:36:52,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:36:52] 2026-01-09 20:36:52,751 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:36:52] 2026-01-09 20:36:52,752 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:36:52] 2026-01-09 20:36:52,754 [wrapper] pilotpid: 604123
[2026-01-09 12:36:52] 2026-01-09 20:36:52,755 [wrapper] Pilot exit status: 0
[2026-01-09 12:36:52] 2026-01-09 20:36:52,762 [wrapper] pandaids: 6963188347
[2026-01-09 12:36:52] 2026-01-09 20:36:52,784 [wrapper] cleanup supervisor_pilot  701456 604124
[2026-01-09 12:36:52] 2026-01-09 20:36:52,786 [wrapper] Test setup, not cleaning
[2026-01-09 12:36:52] 2026-01-09 20:36:52,788 [wrapper] apfmon messages muted
[2026-01-09 12:36:52] 2026-01-09 20:36:52,789 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:36:52] 2026-01-09 20:36:52,790 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:36:52]  *** Error codes and diagnostics ***
[2026-01-09 12:36:52]     "exeErrorCode": 0,
[2026-01-09 12:36:52]     "exeErrorDiag": "",
[2026-01-09 12:36:52]     "pilotErrorCode": 0,
[2026-01-09 12:36:52]     "pilotErrorDiag": "",
[2026-01-09 12:36:52]  *** Listing of results directory ***
[2026-01-09 12:36:52] total 439716
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:21 pilot3.tar.gz
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:21 queuedata.json
[2026-01-09 12:36:52] -rwx------ 1 boinc boinc     36322 Jan  8 20:22 runpilot2-wrapper.sh
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc       100 Jan  9 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:36:52] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 10:21 run_atlas
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc       105 Jan  9 10:21 job.xml
[2026-01-09 12:36:52] -rw-r--r-- 2 boinc boinc 222867478 Jan  9 10:21 EVNT.47898824._001439.pool.root.1
[2026-01-09 12:36:52] -rw-r--r-- 2 boinc boinc    592398 Jan  9 10:21 input.tar.gz
[2026-01-09 12:36:52] drwxrwx--x 2 boinc boinc      4096 Jan  9 10:21 shared
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc         0 Jan  9 10:21 boinc_setup_complete
[2026-01-09 12:36:52] -rw-r--r-- 2 boinc boinc     15847 Jan  9 10:21 start_atlas.sh
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc      7245 Jan  9 10:21 init_data.xml
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc         0 Jan  9 10:21 boinc_lockfile
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc      2517 Jan  9 10:21 pandaJob.out
[2026-01-09 12:36:52] -rw------- 1 boinc boinc    989372 Jan  9 10:21 agis_schedconf.cvmfs.json
[2026-01-09 12:36:52] -rw------- 1 boinc boinc   1516240 Jan  9 10:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:36:52] drwx------ 5 boinc boinc      4096 Jan  9 10:21 pilot3
[2026-01-09 12:36:52] -rw------- 1 boinc boinc 220514957 Jan  9 12:35 HITS.47898826._037499.pool.root.1
[2026-01-09 12:36:52] -rw------- 1 boinc boinc        95 Jan  9 12:35 pilot_heartbeat.json
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc       529 Jan  9 12:35 boinc_task_state.xml
[2026-01-09 12:36:52] -rw------- 1 boinc boinc      1019 Jan  9 12:35 memory_monitor_summary.json
[2026-01-09 12:36:52] -rw------- 1 boinc boinc    298702 Jan  9 12:35 log.47898826._037499.job.log.tgz.1
[2026-01-09 12:36:52] -rw------- 1 boinc boinc      7754 Jan  9 12:36 heartbeat.json
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc      8192 Jan  9 12:36 boinc_mmap_file
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc        27 Jan  9 12:36 wrapper_checkpoint.txt
[2026-01-09 12:36:52] -rw------- 1 boinc boinc      5088 Jan  9 12:36 pilotlog.txt
[2026-01-09 12:36:52] -rw------- 1 boinc boinc   1184024 Jan  9 12:36 log.47898826._037499.job.log.1
[2026-01-09 12:36:52] -rw------- 1 boinc boinc       357 Jan  9 12:36 output.list
[2026-01-09 12:36:52] -rw------- 1 boinc boinc   1505280 Jan  9 12:36 result.tar.gz
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc       620 Jan  9 12:36 runtime_log
[2026-01-09 12:36:52] -rw------- 1 boinc boinc       651 Jan  9 12:36 zdLNDmnBJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMrgKDmsTJ4Mo.diag
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc      8908 Jan  9 12:36 runtime_log.err
[2026-01-09 12:36:52] -rw-r--r-- 1 boinc boinc     21406 Jan  9 12:36 stderr.txt
[2026-01-09 12:36:52] HITS file was successfully produced:
[2026-01-09 12:36:52] -rw------- 1 boinc boinc 220514957 Jan  9 12:35 shared/HITS.pool.root.1
[2026-01-09 12:36:52]  *** Contents of shared directory: ***
[2026-01-09 12:36:52] total 435072
[2026-01-09 12:36:52] -rw-r--r-- 2 boinc boinc 222867478 Jan  9 10:21 ATLAS.root_0
[2026-01-09 12:36:52] -rw-r--r-- 2 boinc boinc    592398 Jan  9 10:21 input.tar.gz
[2026-01-09 12:36:52] -rw-r--r-- 2 boinc boinc     15847 Jan  9 10:21 start_atlas.sh
[2026-01-09 12:36:52] -rw------- 1 boinc boinc 220514957 Jan  9 12:35 HITS.pool.root.1
[2026-01-09 12:36:52] -rw------- 1 boinc boinc   1505280 Jan  9 12:36 result.tar.gz
12:36:54 (599950): run_atlas exited; CPU time 31595.122254
12:36:54 (599950): called boinc_finish(0)

</stderr_txt>
]]>

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