Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:22:40 (3446370): wrapper (7.7.26015): starting
09:22:40 (3446370): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 09:22:40] Arguments: --nthreads 3
[2026-01-10 09:22:40] Threads: 3
[2026-01-10 09:22:40] Checking for CVMFS
[2026-01-10 09:22:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:22:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:22:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:22:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:22:40] 2.9.2.0 2668574 3444 86852 154973 1 81 32960871 36864000 0 130560 0 2070822 99.988 128907 7153 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 09:22:40] CVMFS is ok
[2026-01-10 09:22:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:22:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:22:40] Further information can be found at the LHC@home message board.
[2026-01-10 09:22:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:22:40] Checking for apptainer binary...
[2026-01-10 09:22:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:22:40] Running /usr/bin/apptainer --version
[2026-01-10 09:22:40] apptainer version 1.4.1-1.1
[2026-01-10 09:22:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:22:40] legendA257
[2026-01-10 09:22:40] apptainer works
[2026-01-10 09:22:40] Set ATHENA_PROC_NUMBER=3
[2026-01-10 09:22:40] Set ATHENA_CORE_NUMBER=3
[2026-01-10 09:22:40] Starting ATLAS job with PandaID=6963161622
[2026-01-10 09:22:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:22:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:22:19] 2026-01-10 10:21:41,845 | INFO     | total number of processed events: 400 (read)
[2026-01-10 11:22:19] 2026-01-10 10:21:41,846 | INFO     | executing command: lscpu
[2026-01-10 11:22:19] 2026-01-10 10:21:41,862 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 11:22:19] 2026-01-10 10:21:42,110 | INFO     | monitor loop #549: job 0:6963161622 is in state 'finished'
[2026-01-10 11:22:19] 2026-01-10 10:21:42,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:22:19] 2026-01-10 10:21:43,787 | INFO     | time since job start (7137s) is within the limit (349056.0s)
[2026-01-10 11:22:19] 2026-01-10 10:21:44,613 | INFO     | monitor loop #550: job 0:6963161622 is in state 'finished'
[2026-01-10 11:22:19] 2026-01-10 10:21:44,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:22:19] 2026-01-10 10:21:45,793 | INFO     | time since job start (7139s) is within the limit (349056.0s)
[2026-01-10 11:22:19] 2026-01-10 10:21:46,865 | INFO     | PID=3450097 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:22:19] 2026-01-10 10:21:46,982 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 11:22:19] 2026-01-10 10:21:46,983 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3736.2245000000007
[2026-01-10 11:22:19] 2026-01-10 10:21:46,984 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963161622/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:22:19] 2026-01-10 10:21:46,985 | INFO     | extracted standard info from prmon json
[2026-01-10 11:22:19] 2026-01-10 10:21:46,985 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:22:19] 2026-01-10 10:21:46,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:22:19] 2026-01-10 10:21:46,985 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:22:19] 2026-01-10 10:21:46,985 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:22:19] 2026-01-10 10:21:46,986 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:22:19] 2026-01-10 10:21:46,986 | INFO     | sum of square deviations: 496597218.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,986 | INFO     | sum of deviations: -8916780774.000004
[2026-01-10 11:22:19] 2026-01-10 10:21:46,986 | INFO     | mean x: 1768036924.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,986 | INFO     | mean y: 2428928.8547008545
[2026-01-10 11:22:19] 2026-01-10 10:21:46,986 | INFO     | intersect: 31748876714.321968
[2026-01-10 11:22:19] 2026-01-10 10:21:46,986 | INFO     | chi2: 1.5547750939300513
[2026-01-10 11:22:19] 2026-01-10 10:21:46,986 | INFO     | sum of square deviations: 435610028.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | sum of deviations: -7612555542.499999
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | mean x: 1768036771.5
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | mean y: 2432192.2410714286
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | intersect: 30899971870.15255
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | chi2: 1.5558870688114068
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | current chi2=1.5558870688114068 (change=-0.07151998290278319 %)
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | right removable region: 111
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | sum of square deviations: 435610028.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | sum of deviations: -23790737215.500004
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | mean x: 1768037076.5
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | mean y: 2465178.6696428573
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | intersect: 96563386118.42445
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | chi2: 0.08617866376507301
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | current chi2=0.08617866376507301 (change=94.45716206147627 %)
[2026-01-10 11:22:19] 2026-01-10 10:21:46,987 | INFO     | sum of square deviations: 379832238.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | sum of deviations: -19741582499.999996
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | mean x: 1768037229.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | mean y: 2454103.2523364485
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | intersect: 91895267107.12086
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | chi2: 0.08283309009349461
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | current chi2=0.08283309009349461 (change=3.882136860114914 %)
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | left removable region: 20
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | sum of square deviations: 233641590.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | sum of deviations: -12936406091.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | mean x: 1768037351.0
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | mean y: 2442085.263736264
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | intersect: 97896182478.79515
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | chi2: 0.07388087389363249
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | current memory leak: -55.37 B/s (using 91 data points, chi2=0.07)
[2026-01-10 11:22:19] 2026-01-10 10:21:46,988 | INFO     | could have reported an average CPU frequency of 3849 MHz (7 samples)
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | ..............................
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | . Timing measurements:
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | . get job = 0 s
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | . initial setup = 1 s
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | . payload setup = 2 s
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | . stage-in = 0 s
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | . payload execution = 7113 s
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | . stage-out = 0 s
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | . log creation = 0 s
[2026-01-10 11:22:19] 2026-01-10 10:21:46,989 | INFO     | ..............................
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | 
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | job summary report
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | --------------------------------------------------
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | PanDA job id: 6963161622
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | task id: 47898826
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | errors: (none)
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | pilot state: finished 
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | transexitcode: 0
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | exeerrorcode: 0
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | exeerrordiag: 
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | exitcode: 0
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | exitmsg: OK
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | cpuconsumptiontime: 20671 s
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | nevents: 400
[2026-01-10 11:22:19] 2026-01-10 10:21:47,018 | INFO     | neventsw: 0
[2026-01-10 11:22:19] 2026-01-10 10:21:47,019 | INFO     | pid: 3456536
[2026-01-10 11:22:19] 2026-01-10 10:21:47,019 | INFO     | pgrp: 3456536
[2026-01-10 11:22:19] 2026-01-10 10:21:47,019 | INFO     | corecount: 3
[2026-01-10 11:22:19] 2026-01-10 10:21:47,019 | INFO     | event service: False
[2026-01-10 11:22:19] 2026-01-10 10:21:47,019 | INFO     | sizes: {0: 2283973, 3: 2284235, 11: 2284263, 7119: 2311702, 7121: 2320706, 7122: 2320762, 7128: 2321084}
[2026-01-10 11:22:19] 2026-01-10 10:21:47,019 | INFO     | --------------------------------------------------
[2026-01-10 11:22:19] 2026-01-10 10:21:47,019 | INFO     | 
[2026-01-10 11:22:19] 2026-01-10 10:21:47,019 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,030 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:22:19] 2026-01-10 10:21:47,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,031 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:22:19] 2026-01-10 10:21:47,031 | INFO     | job 6963161622 has completed (purged errors)
[2026-01-10 11:22:19] 2026-01-10 10:21:47,031 | INFO     | overall cleanup function is called
[2026-01-10 11:22:19] 2026-01-10 10:21:48,037 | INFO     | --- collectZombieJob: --- 10, [3456536]
[2026-01-10 11:22:19] 2026-01-10 10:21:48,037 | INFO     | zombie collector waiting for pid 3456536
[2026-01-10 11:22:19] 2026-01-10 10:21:48,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:22:19] 2026-01-10 10:21:48,037 | INFO     | collected zombie processes
[2026-01-10 11:22:19] 2026-01-10 10:21:48,038 | INFO     | will attempt to kill all subprocesses of pid=3456536
[2026-01-10 11:22:19] 2026-01-10 10:21:48,079 | INFO     | process IDs to be killed: [3456536] (in reverse order)
[2026-01-10 11:22:19] 2026-01-10 10:21:48,103 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:22:19] 2026-01-10 10:21:48,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:22:19] 2026-01-10 10:21:48,104 | INFO     | did not find any defunct processes belonging to 3456536
[2026-01-10 11:22:19] 2026-01-10 10:21:48,105 | INFO     | did not find any defunct processes belonging to 3456536
[2026-01-10 11:22:19] 2026-01-10 10:21:48,105 | INFO     | ready for new job
[2026-01-10 11:22:19] 2026-01-10 10:21:48,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:22:19] 2026-01-10 10:21:48,106 | INFO     | ***************************************
[2026-01-10 11:22:19] 2026-01-10 10:21:48,106 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:22:19] 2026-01-10 10:21:48,106 | INFO     | ***************************************
[2026-01-10 11:22:19] 2026-01-10 10:21:48,106 | INFO     | 
[2026-01-10 11:22:19] 2026-01-10 10:21:48,106 | INFO     | architecture information:
[2026-01-10 11:22:19] 2026-01-10 10:21:48,107 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:22:19] 2026-01-10 10:21:48,115 | INFO     | cat /etc/os-release:
[2026-01-10 11:22:19] NAME="CentOS Linux"
[2026-01-10 11:22:19] VERSION="7 (Core)"
[2026-01-10 11:22:19] ID="centos"
[2026-01-10 11:22:19] ID_LIKE="rhel fedora"
[2026-01-10 11:22:19] VERSION_ID="7"
[2026-01-10 11:22:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:22:19] ANSI_COLOR="0;31"
[2026-01-10 11:22:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:22:19] HOME_URL="https://www.centos.org/"
[2026-01-10 11:22:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:22:19] 
[2026-01-10 11:22:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:22:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:22:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:22:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:22:19] 
[2026-01-10 11:22:19] 2026-01-10 10:21:48,115 | INFO     | ***************************************
[2026-01-10 11:22:19] 2026-01-10 10:21:48,618 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 11:22:19] 2026-01-10 10:21:48,631 | INFO     | sufficient remaining disk space (327181926400 B)
[2026-01-10 11:22:19] 2026-01-10 10:21:48,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:22:19] 2026-01-10 10:21:48,631 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:22:19] 2026-01-10 10:21:48,631 | INFO     | update_server=False
[2026-01-10 11:22:19] 2026-01-10 10:21:48,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:22:19] 2026-01-10 10:21:48,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:22:19] 2026-01-10 10:21:48,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:22:19] 2026-01-10 10:21:48,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:22:19] 2026-01-10 10:21:48,632 | INFO     | aborting loop
[2026-01-10 11:22:19] 2026-01-10 10:21:48,661 | INFO     | all payload control threads have been joined
[2026-01-10 11:22:19] 2026-01-10 10:21:48,989 | INFO     | all data control threads have been joined
[2026-01-10 11:22:19] 2026-01-10 10:21:49,632 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:49,637 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:49,637 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:49,666 | INFO     | [payload] control thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:49,995 | INFO     | [data] control thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,267 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,281 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,333 | INFO     | all job control threads have been joined
[2026-01-10 11:22:19] 2026-01-10 10:21:50,370 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,637 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,637 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,775 | INFO     | [job] validate thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,840 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,892 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:50,985 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:51,339 | INFO     | [job] control thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:51,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:22:19] 2026-01-10 10:21:54,097 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:22:19] 2026-01-10 10:21:55,545 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:22:19] 2026-01-10 10:21:55,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641434703680)>', '<ExcThread(monitor, started 140641086453504)>']
[2026-01-10 11:22:19] 2026-01-10 10:22:00,882 | INFO     | all workflow threads have been joined
[2026-01-10 11:22:19] 2026-01-10 10:22:00,882 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:22:19] 2026-01-10 10:22:00,882 | INFO     | traces error code: 0
[2026-01-10 11:22:19] 2026-01-10 10:22:00,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:22:19] 2026-01-10 10:22:18,971 | INFO     | PID=3450097 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:22:19] 2026-01-10 10:22:18,971 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:22:19] 2026-01-10 10:22:18,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:22:19] 2026-01-10 10:22:18,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:22:19] 2026-01-10 10:22:18,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:22:19] 2026-01-10 10:22:18,971 | INFO     | [monitor] control thread has ended
[2026-01-10 11:22:19] 2026-01-10 10:22:19,023 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:22:19] 2026-01-10 10:22:19,025 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:22:19] 2026-01-10 10:22:19,027 [wrapper] pilotpid: 3450097
[2026-01-10 11:22:19] 2026-01-10 10:22:19,029 [wrapper] Pilot exit status: 0
[2026-01-10 11:22:19] 2026-01-10 10:22:19,037 [wrapper] pandaids: 6963161622
[2026-01-10 11:22:19] 2026-01-10 10:22:19,052 [wrapper] cleanup supervisor_pilot 3470852 3450098
[2026-01-10 11:22:19] 2026-01-10 10:22:19,054 [wrapper] Test setup, not cleaning
[2026-01-10 11:22:19] 2026-01-10 10:22:19,057 [wrapper] apfmon messages muted
[2026-01-10 11:22:19] 2026-01-10 10:22:19,059 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:22:19] 2026-01-10 10:22:19,061 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:22:19]  *** Error codes and diagnostics ***
[2026-01-10 11:22:19]     "exeErrorCode": 0,
[2026-01-10 11:22:19]     "exeErrorDiag": "",
[2026-01-10 11:22:19]     "pilotErrorCode": 0,
[2026-01-10 11:22:19]     "pilotErrorDiag": "",
[2026-01-10 11:22:19]  *** Listing of results directory ***
[2026-01-10 11:22:19] total 444980
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-10 11:22:19] -rwx------ 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc       100 Jan 10 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:22:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 09:22 run_atlas
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc       105 Jan 10 09:22 job.xml
[2026-01-10 11:22:19] -rw-r--r-- 2 boinc boinc 226922573 Jan 10 09:22 EVNT.47898824._001287.pool.root.1
[2026-01-10 11:22:19] -rw-r--r-- 2 boinc boinc    592393 Jan 10 09:22 input.tar.gz
[2026-01-10 11:22:19] -rw-r--r-- 2 boinc boinc     15847 Jan 10 09:22 start_atlas.sh
[2026-01-10 11:22:19] drwxrwx--x 2 boinc boinc      4096 Jan 10 09:22 shared
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc         0 Jan 10 09:22 boinc_setup_complete
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc      6442 Jan 10 09:22 init_data.xml
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc         0 Jan 10 09:22 boinc_lockfile
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc      2519 Jan 10 09:22 pandaJob.out
[2026-01-10 11:22:19] -rw------- 1 boinc boinc    989548 Jan 10 09:22 agis_schedconf.cvmfs.json
[2026-01-10 11:22:19] -rw------- 1 boinc boinc   1516240 Jan 10 09:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:22:19] drwx------ 5 boinc boinc      4096 Jan 10 09:22 pilot3
[2026-01-10 11:22:19] -rw------- 1 boinc boinc 222203066 Jan 10 11:21 HITS.47898826._033284.pool.root.1
[2026-01-10 11:22:19] -rw------- 1 boinc boinc        95 Jan 10 11:21 pilot_heartbeat.json
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc       529 Jan 10 11:21 boinc_task_state.xml
[2026-01-10 11:22:19] -rw------- 1 boinc boinc      1015 Jan 10 11:21 memory_monitor_summary.json
[2026-01-10 11:22:19] -rw------- 1 boinc boinc    283708 Jan 10 11:21 log.47898826._033284.job.log.tgz.1
[2026-01-10 11:22:19] -rw------- 1 boinc boinc      7763 Jan 10 11:21 heartbeat.json
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc      8192 Jan 10 11:21 boinc_mmap_file
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc        27 Jan 10 11:21 wrapper_checkpoint.txt
[2026-01-10 11:22:19] -rw------- 1 boinc boinc       747 Jan 10 11:22 pilotlog.txt
[2026-01-10 11:22:19] -rw------- 1 boinc boinc   1027556 Jan 10 11:22 log.47898826._033284.job.log.1
[2026-01-10 11:22:19] -rw------- 1 boinc boinc       357 Jan 10 11:22 output.list
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc       620 Jan 10 11:22 runtime_log
[2026-01-10 11:22:19] -rw------- 1 boinc boinc   1331200 Jan 10 11:22 result.tar.gz
[2026-01-10 11:22:19] -rw------- 1 boinc boinc       663 Jan 10 11:22 y4TLDmG1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKVlKDm65R1In.diag
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc      8917 Jan 10 11:22 runtime_log.err
[2026-01-10 11:22:19] -rw-r--r-- 1 boinc boinc     21474 Jan 10 11:22 stderr.txt
[2026-01-10 11:22:19] HITS file was successfully produced:
[2026-01-10 11:22:19] -rw------- 1 boinc boinc 222203066 Jan 10 11:21 shared/HITS.pool.root.1
[2026-01-10 11:22:19]  *** Contents of shared directory: ***
[2026-01-10 11:22:19] total 440508
[2026-01-10 11:22:19] -rw-r--r-- 2 boinc boinc 226922573 Jan 10 09:22 ATLAS.root_0
[2026-01-10 11:22:19] -rw-r--r-- 2 boinc boinc    592393 Jan 10 09:22 input.tar.gz
[2026-01-10 11:22:19] -rw-r--r-- 2 boinc boinc     15847 Jan 10 09:22 start_atlas.sh
[2026-01-10 11:22:19] -rw------- 1 boinc boinc 222203066 Jan 10 11:21 HITS.pool.root.1
[2026-01-10 11:22:19] -rw------- 1 boinc boinc   1331200 Jan 10 11:22 result.tar.gz
11:22:20 (3446370): run_atlas exited; CPU time 20698.818885
11:22:20 (3446370): called boinc_finish(0)

</stderr_txt>
]]>

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