Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:53:35 (1171640): wrapper (7.7.26015): starting
13:53:35 (1171640): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 13:53:35] Arguments: --nthreads 9
[2026-01-09 13:53:35] Threads: 9
[2026-01-09 13:53:35] Checking for CVMFS
[2026-01-09 13:53:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:53:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:53:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:53:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:53:35] 2.13.3.0 12500 93796 209388 154953 0 315 30956009 32503808 17658 16776704 0 500937522 99.477 670666790 35382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 13:53:35] CVMFS is ok
[2026-01-09 13:53:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:53:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:53:35] Further information can be found at the LHC@home message board.
[2026-01-09 13:53:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:53:35] Checking for apptainer binary...
[2026-01-09 13:53:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:53:35] Running /usr/bin/apptainer --version
[2026-01-09 13:53:35] apptainer version 1.4.5-2.el9
[2026-01-09 13:53:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:53:35] c7-7-36.aglt2.org
[2026-01-09 13:53:35] apptainer works
[2026-01-09 13:53:35] Set ATHENA_PROC_NUMBER=9
[2026-01-09 13:53:35] Set ATHENA_CORE_NUMBER=9
[2026-01-09 13:53:35] Starting ATLAS job with PandaID=6963151985
[2026-01-09 13:53:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:12:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:12:36] 2026-01-10 01:11:23,242 | INFO     | time since job start (22653s) is within the limit (349056.0s)
[2026-01-09 20:12:36] 2026-01-10 01:11:23,243 | INFO     | 22655s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 20:12:36] 2026-01-10 01:11:25,267 | INFO     | time since job start (22655s) is within the limit (349056.0s)
[2026-01-09 20:12:36] 2026-01-10 01:11:25,305 | INFO     | monitor loop #1479: job 0:6963151985 is in state 'finished'
[2026-01-09 20:12:36] 2026-01-10 01:11:25,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:12:36] 2026-01-10 01:11:27,273 | INFO     | time since job start (22657s) is within the limit (349056.0s)
[2026-01-09 20:12:36] 2026-01-10 01:11:27,810 | INFO     | monitor loop #1480: job 0:6963151985 is in state 'finished'
[2026-01-09 20:12:36] 2026-01-10 01:11:27,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:12:36] 2026-01-10 01:11:29,280 | INFO     | time since job start (22659s) is within the limit (349056.0s)
[2026-01-09 20:12:36] 2026-01-10 01:11:29,602 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:12:36] 2026-01-10 01:11:29,608 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3181.027062500001
[2026-01-09 20:12:36] 2026-01-10 01:11:29,621 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963151985/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:12:36] 2026-01-10 01:11:29,622 | INFO     | extracted standard info from prmon json
[2026-01-09 20:12:36] 2026-01-10 01:11:29,623 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:12:36] 2026-01-10 01:11:29,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:12:36] 2026-01-10 01:11:29,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:12:36] 2026-01-10 01:11:29,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:12:36] 2026-01-10 01:11:29,658 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:12:36] 2026-01-10 01:11:29,659 | INFO     | sum of square deviations: 15834505573.309977
[2026-01-09 20:12:36] 2026-01-10 01:11:29,667 | INFO     | sum of deviations: 158440008389.79227
[2026-01-09 20:12:36] 2026-01-10 01:11:29,667 | INFO     | mean x: 1767996148.0997305
[2026-01-09 20:12:36] 2026-01-10 01:11:29,667 | INFO     | mean y: 2524210.9245283017
[2026-01-09 20:12:36] 2026-01-10 01:11:29,667 | INFO     | intersect: -17688039175.54478
[2026-01-09 20:12:36] 2026-01-10 01:11:29,668 | INFO     | chi2: 1.5662205290175515
[2026-01-09 20:12:36] 2026-01-10 01:11:29,668 | INFO     | sum of square deviations: 15202860238.153006
[2026-01-09 20:12:36] 2026-01-10 01:11:29,689 | INFO     | sum of deviations: 155132134406.5681
[2026-01-09 20:12:36] 2026-01-10 01:11:29,690 | INFO     | mean x: 1767995995.5956285
[2026-01-09 20:12:36] 2026-01-10 01:11:29,690 | INFO     | mean y: 2523413.355191257
[2026-01-09 20:12:36] 2026-01-10 01:11:29,690 | INFO     | intersect: -18038357586.833275
[2026-01-09 20:12:36] 2026-01-10 01:11:29,690 | INFO     | chi2: 1.565152558029883
[2026-01-09 20:12:36] 2026-01-10 01:11:29,691 | INFO     | current chi2=1.565152558029883 (change=0.06818777866092271 %)
[2026-01-09 20:12:36] 2026-01-10 01:11:29,691 | INFO     | right removable region: 365
[2026-01-09 20:12:36] 2026-01-10 01:11:29,691 | INFO     | sum of square deviations: 15202882445.759611
[2026-01-09 20:12:36] 2026-01-10 01:11:29,706 | INFO     | sum of deviations: 105990276922.27338
[2026-01-09 20:12:36] 2026-01-10 01:11:29,706 | INFO     | mean x: 1767996300.6010928
[2026-01-09 20:12:36] 2026-01-10 01:11:29,707 | INFO     | mean y: 2536802.316939891
[2026-01-09 20:12:36] 2026-01-10 01:11:29,707 | INFO     | intersect: -12323442706.294708
[2026-01-09 20:12:36] 2026-01-10 01:11:29,707 | INFO     | chi2: 0.3686794626580365
[2026-01-09 20:12:36] 2026-01-10 01:11:29,707 | INFO     | current chi2=0.3686794626580365 (change=76.46056504639871 %)
[2026-01-09 20:12:36] 2026-01-10 01:11:29,708 | INFO     | sum of square deviations: 14588282893.207794
[2026-01-09 20:12:36] 2026-01-10 01:11:29,710 | INFO     | sum of deviations: 93563509837.82826
[2026-01-09 20:12:36] 2026-01-10 01:11:29,710 | INFO     | mean x: 1767996453.102493
[2026-01-09 20:12:36] 2026-01-10 01:11:29,710 | INFO     | mean y: 2539882.301939058
[2026-01-09 20:12:36] 2026-01-10 01:11:29,710 | INFO     | intersect: -11336694127.899426
[2026-01-09 20:12:36] 2026-01-10 01:11:29,711 | INFO     | chi2: 0.3476309401227781
[2026-01-09 20:12:36] 2026-01-10 01:11:29,711 | INFO     | current chi2=0.3476309401227781 (change=5.709166001140039 %)
[2026-01-09 20:12:36] 2026-01-10 01:11:29,711 | INFO     | left removable region: 20
[2026-01-09 20:12:36] 2026-01-10 01:11:29,711 | INFO     | sum of square deviations: 12733238485.449236
[2026-01-09 20:12:36] 2026-01-10 01:11:29,714 | INFO     | sum of deviations: 60715793066.98547
[2026-01-09 20:12:36] 2026-01-10 01:11:29,714 | INFO     | mean x: 1767996575.1014493
[2026-01-09 20:12:36] 2026-01-10 01:11:29,714 | INFO     | mean y: 2547242.428985507
[2026-01-09 20:12:36] 2026-01-10 01:11:29,714 | INFO     | intersect: -8427775830.500676
[2026-01-09 20:12:36] 2026-01-10 01:11:29,715 | INFO     | chi2: 0.2460696896199696
[2026-01-09 20:12:36] 2026-01-10 01:11:29,715 | INFO     | current memory leak: 4.77 B/s (using 345 data points, chi2=0.25)
[2026-01-09 20:12:36] 2026-01-10 01:11:29,715 | INFO     | could have reported an average CPU frequency of 3161 MHz (16 samples)
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | ..............................
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | . Timing measurements:
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | . get job = 0 s
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | . initial setup = 2 s
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | . payload setup = 8 s
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | . stage-in = 0 s
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | . payload execution = 22608 s
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | . stage-out = 2 s
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | . log creation = 0 s
[2026-01-09 20:12:36] 2026-01-10 01:11:29,716 | INFO     | ..............................
[2026-01-09 20:12:36] 2026-01-10 01:11:30,306 | INFO     | 
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | job summary report
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | --------------------------------------------------
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | PanDA job id: 6963151985
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | task id: 47898826
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | errors: (none)
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | pilot state: finished 
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | transexitcode: 0
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | exeerrorcode: 0
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | exeerrordiag: 
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | exitcode: 0
[2026-01-09 20:12:36] 2026-01-10 01:11:30,307 | INFO     | exitmsg: OK
[2026-01-09 20:12:36] 2026-01-10 01:11:30,308 | INFO     | cpuconsumptiontime: 47918 s
[2026-01-09 20:12:36] 2026-01-10 01:11:30,308 | INFO     | nevents: 400
[2026-01-09 20:12:36] 2026-01-10 01:11:30,308 | INFO     | neventsw: 0
[2026-01-09 20:12:36] 2026-01-10 01:11:30,308 | INFO     | pid: 1182984
[2026-01-09 20:12:36] 2026-01-10 01:11:30,308 | INFO     | pgrp: 1182984
[2026-01-09 20:12:36] 2026-01-10 01:11:30,308 | INFO     | corecount: 9
[2026-01-09 20:12:36] 2026-01-10 01:11:30,308 | INFO     | event service: False
[2026-01-09 20:12:36] 2026-01-10 01:11:30,308 | INFO     | sizes: {0: 2283970, 7: 2284232, 11: 2284260, 22621: 2318834, 22624: 2327832, 22627: 2327888, 22641: 2328210}
[2026-01-09 20:12:36] 2026-01-10 01:11:30,317 | INFO     | --------------------------------------------------
[2026-01-09 20:12:36] 2026-01-10 01:11:30,317 | INFO     | 
[2026-01-09 20:12:36] 2026-01-10 01:11:30,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 20:12:36] 2026-01-10 01:11:30,436 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,438 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:12:36] 2026-01-10 01:11:30,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:12:36] 2026-01-10 01:11:30,438 | INFO     | job 6963151985 has completed (purged errors)
[2026-01-09 20:12:36] 2026-01-10 01:11:30,438 | INFO     | overall cleanup function is called
[2026-01-09 20:12:36] 2026-01-10 01:11:31,447 | INFO     | --- collectZombieJob: --- 10, [1182984]
[2026-01-09 20:12:36] 2026-01-10 01:11:31,447 | INFO     | zombie collector waiting for pid 1182984
[2026-01-09 20:12:36] 2026-01-10 01:11:31,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:12:36] 2026-01-10 01:11:31,448 | INFO     | collected zombie processes
[2026-01-09 20:12:36] 2026-01-10 01:11:31,448 | INFO     | will attempt to kill all subprocesses of pid=1182984
[2026-01-09 20:12:36] 2026-01-10 01:11:32,296 | INFO     | process IDs to be killed: [1182984] (in reverse order)
[2026-01-09 20:12:36] 2026-01-10 01:11:32,477 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:12:36] 2026-01-10 01:11:32,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:12:36] 2026-01-10 01:11:32,591 | INFO     | did not find any defunct processes belonging to 1182984
[2026-01-09 20:12:36] 2026-01-10 01:11:32,696 | INFO     | did not find any defunct processes belonging to 1182984
[2026-01-09 20:12:36] 2026-01-10 01:11:32,696 | INFO     | ready for new job
[2026-01-09 20:12:36] 2026-01-10 01:11:32,697 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:12:36] 2026-01-10 01:11:32,713 | INFO     | ***************************************
[2026-01-09 20:12:36] 2026-01-10 01:11:32,713 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:12:36] 2026-01-10 01:11:32,713 | INFO     | ***************************************
[2026-01-09 20:12:36] 2026-01-10 01:11:32,713 | INFO     | 
[2026-01-09 20:12:36] 2026-01-10 01:11:32,750 | INFO     | architecture information:
[2026-01-09 20:12:36] 2026-01-10 01:11:32,769 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:12:36] 2026-01-10 01:11:32,819 | INFO     | cat /etc/os-release:
[2026-01-09 20:12:36] NAME="CentOS Linux"
[2026-01-09 20:12:36] VERSION="7 (Core)"
[2026-01-09 20:12:36] ID="centos"
[2026-01-09 20:12:36] ID_LIKE="rhel fedora"
[2026-01-09 20:12:36] VERSION_ID="7"
[2026-01-09 20:12:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:12:36] ANSI_COLOR="0;31"
[2026-01-09 20:12:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:12:36] HOME_URL="https://www.centos.org/"
[2026-01-09 20:12:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:12:36] 
[2026-01-09 20:12:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:12:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:12:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:12:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:12:36] 
[2026-01-09 20:12:36] 2026-01-10 01:11:32,820 | INFO     | ***************************************
[2026-01-09 20:12:36] 2026-01-10 01:11:33,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 20:12:36] 2026-01-10 01:11:33,347 | INFO     | sufficient remaining disk space (93007642624 B)
[2026-01-09 20:12:36] 2026-01-10 01:11:33,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:12:36] 2026-01-10 01:11:33,347 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:12:36] 2026-01-10 01:11:33,347 | INFO     | update_server=False
[2026-01-09 20:12:36] 2026-01-10 01:11:33,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:12:36] 2026-01-10 01:11:33,495 | INFO     | all payload control threads have been joined
[2026-01-09 20:12:36] 2026-01-10 01:11:33,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:12:36] 2026-01-10 01:11:33,741 | INFO     | all job control threads have been joined
[2026-01-09 20:12:36] 2026-01-10 01:11:33,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:12:36] 2026-01-10 01:11:33,863 | INFO     | aborting loop
[2026-01-09 20:12:36] 2026-01-10 01:11:34,277 | INFO     | all data control threads have been joined
[2026-01-09 20:12:36] 2026-01-10 01:11:34,355 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:34,514 | INFO     | [payload] control thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:34,748 | INFO     | [job] control thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:34,796 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:34,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:12:36] 2026-01-10 01:11:34,869 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,067 | INFO     | [job] validate thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,098 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,282 | INFO     | [data] control thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,389 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,526 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:12:36] 2026-01-10 01:11:35,597 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,762 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,822 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,839 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:35,848 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:11:39,584 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:12:36] 2026-01-10 01:12:03,079 | INFO     | PID=1176580 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:12:36] 2026-01-10 01:12:03,080 | INFO     | .. there are 17 such processes running
[2026-01-09 20:12:36] 2026-01-10 01:12:03,080 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:12:36] 2026-01-10 01:12:03,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:12:36] 2026-01-10 01:12:03,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:12:36] 2026-01-10 01:12:28,900 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:12:36] 2026-01-10 01:12:30,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861295437632)>', '<ExcThread(monitor, started 139860945909504)>']
[2026-01-09 20:12:36] 2026-01-10 01:12:31,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:12:36] 2026-01-10 01:12:31,263 | INFO     | [monitor] control thread has ended
[2026-01-09 20:12:36] 2026-01-10 01:12:35,497 | INFO     | all workflow threads have been joined
[2026-01-09 20:12:36] 2026-01-10 01:12:35,497 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:12:36] 2026-01-10 01:12:35,498 | INFO     | traces error code: 0
[2026-01-09 20:12:36] 2026-01-10 01:12:35,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:12:36] 2026-01-10 01:12:35,904 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:12:36] 2026-01-10 01:12:35,915 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:12:36] 2026-01-10 01:12:35,927 [wrapper] pilotpid: 1176580
[2026-01-09 20:12:36] 2026-01-10 01:12:35,929 [wrapper] Pilot exit status: 0
[2026-01-09 20:12:36] 2026-01-10 01:12:35,940 [wrapper] pandaids: 6963151985
[2026-01-09 20:12:36] 2026-01-10 01:12:36,215 [wrapper] cleanup supervisor_pilot 2111929 1176581
[2026-01-09 20:12:36] 2026-01-10 01:12:36,221 [wrapper] Test setup, not cleaning
[2026-01-09 20:12:36] 2026-01-10 01:12:36,234 [wrapper] apfmon messages muted
[2026-01-09 20:12:36] 2026-01-10 01:12:36,245 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:12:36] 2026-01-10 01:12:36,259 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:12:36]  *** Error codes and diagnostics ***
[2026-01-09 20:12:36]     "exeErrorCode": 0,
[2026-01-09 20:12:36]     "exeErrorDiag": "",
[2026-01-09 20:12:36]     "pilotErrorCode": 0,
[2026-01-09 20:12:36]     "pilotErrorDiag": "",
[2026-01-09 20:12:36]  *** Listing of results directory ***
[2026-01-09 20:12:36] total 446600
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 20:12:36] -rwx------. 1 boincer umatlas     36322 Jan  8 11:03 runpilot2-wrapper.sh
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:12:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:53 run_atlas
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:53 job.xml
[2026-01-09 20:12:36] -rw-r--r--. 2 boincer umatlas 226804402 Jan  9 13:53 EVNT.47898824._001133.pool.root.1
[2026-01-09 20:12:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:53 start_atlas.sh
[2026-01-09 20:12:36] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:53 shared
[2026-01-09 20:12:36] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 13:53 input.tar.gz
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:53 boinc_lockfile
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 13:53 pandaJob.out
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas        57 Jan  9 13:53 setup.sh.local
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas    989372 Jan  9 13:53 agis_schedconf.cvmfs.json
[2026-01-09 20:12:36] drwx------. 5 boincer umatlas      4096 Jan  9 13:53 pilot3
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas 219480982 Jan  9 20:10 HITS.47898826._028936.pool.root.1
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas       531 Jan  9 20:10 boinc_task_state.xml
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas      1031 Jan  9 20:11 memory_monitor_summary.json
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas    581169 Jan  9 20:11 log.47898826._028936.job.log.tgz.1
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas      7771 Jan  9 20:11 heartbeat.json
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas        95 Jan  9 20:12 pilot_heartbeat.json
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas      6946 Jan  9 20:12 init_data.xml
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:12 boinc_mmap_file
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:12 wrapper_checkpoint.txt
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas      4824 Jan  9 20:12 pilotlog.txt
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas   2975775 Jan  9 20:12 log.47898826._028936.job.log.1
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas       357 Jan  9 20:12 output.list
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:12 runtime_log
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas   3573760 Jan  9 20:12 result.tar.gz
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas       656 Jan  9 20:12 ZzuMDmTf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzifKDmgYPBQm.diag
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 20:12 runtime_log.err
[2026-01-09 20:12:36] -rw-r--r--. 1 boincer umatlas     21406 Jan  9 20:12 stderr.txt
[2026-01-09 20:12:36] HITS file was successfully produced:
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas 219480982 Jan  9 20:10 shared/HITS.pool.root.1
[2026-01-09 20:12:36]  *** Contents of shared directory: ***
[2026-01-09 20:12:36] total 439928
[2026-01-09 20:12:36] -rw-r--r--. 2 boincer umatlas 226804402 Jan  9 13:53 ATLAS.root_0
[2026-01-09 20:12:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:53 start_atlas.sh
[2026-01-09 20:12:36] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 13:53 input.tar.gz
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas 219480982 Jan  9 20:10 HITS.pool.root.1
[2026-01-09 20:12:36] -rw-------. 1 boincer umatlas   3573760 Jan  9 20:12 result.tar.gz
20:12:38 (1171640): run_atlas exited; CPU time 48689.449713
20:12:38 (1171640): called boinc_finish(0)

</stderr_txt>
]]>

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