Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:13:25 (18517): wrapper (7.7.26015): starting
19:13:25 (18517): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 19:13:25] Arguments: --nthreads 8
[2026-01-10 19:13:25] Threads: 8
[2026-01-10 19:13:25] Checking for CVMFS
[2026-01-10 19:13:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:13:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:13:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:13:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:13:29] 2.11.2.0 17161 17443 101624 154987 0 87 20993719 25165825 899 130560 0 2636994 99.481 2784919 3076 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 19:13:29] CVMFS is ok
[2026-01-10 19:13:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:13:29] Checking for apptainer binary...
[2026-01-10 19:13:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:13:29] Running /usr/bin/apptainer --version
[2026-01-10 19:13:29] apptainer version 1.3.2-1.el7
[2026-01-10 19:13:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:13:41] cg-vwn491.simple-grid.lan
[2026-01-10 19:13:41] apptainer works
[2026-01-10 19:13:41] Set ATHENA_PROC_NUMBER=8
[2026-01-10 19:13:41] Set ATHENA_CORE_NUMBER=8
[2026-01-10 19:13:41] Starting ATLAS job with PandaID=6963157041
[2026-01-10 19:13:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 00:39:44]  *** The last 200 lines of the pilot log: ***
[2026-01-11 00:39:44] 2026-01-10 23:38:29,574 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-11 00:39:44] 2026-01-10 23:38:29,576 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6963157041/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,577 | INFO     | extracted standard info from prmon json
[2026-01-11 00:39:44] 2026-01-10 23:38:29,577 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 00:39:44] 2026-01-10 23:38:29,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 00:39:44] 2026-01-10 23:38:29,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 00:39:44] 2026-01-10 23:38:29,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 00:39:44] 2026-01-10 23:38:29,584 | INFO     | fitting pss+swap vs Time
[2026-01-11 00:39:44] 2026-01-10 23:38:29,585 | INFO     | sum of square deviations: 8797783560.0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,588 | INFO     | sum of deviations: 130539700306.99995
[2026-01-11 00:39:44] 2026-01-10 23:38:29,588 | INFO     | mean x: 1768078873.0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,588 | INFO     | mean y: 2443991.7442622953
[2026-01-11 00:39:44] 2026-01-10 23:38:29,588 | INFO     | intersect: -26231946139.18983
[2026-01-11 00:39:44] 2026-01-10 23:38:29,589 | INFO     | chi2: 8.722532051318833
[2026-01-11 00:39:44] 2026-01-10 23:38:29,589 | INFO     | sum of square deviations: 8372156975.0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,592 | INFO     | sum of deviations: 148440976948.5
[2026-01-11 00:39:44] 2026-01-10 23:38:29,592 | INFO     | mean x: 1768078720.5
[2026-01-11 00:39:44] 2026-01-10 23:38:29,593 | INFO     | mean y: 2450309.5833333335
[2026-01-11 00:39:44] 2026-01-10 23:38:29,593 | INFO     | intersect: -31346141621.574753
[2026-01-11 00:39:44] 2026-01-10 23:38:29,593 | INFO     | chi2: 8.020218439810268
[2026-01-11 00:39:44] 2026-01-10 23:38:29,593 | INFO     | current chi2=8.020218439810268 (change=8.051717177724514 %)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,593 | INFO     | right removable region: 299
[2026-01-11 00:39:44] 2026-01-10 23:38:29,594 | INFO     | sum of square deviations: 8372156975.0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,597 | INFO     | sum of deviations: 24058514771.499985
[2026-01-11 00:39:44] 2026-01-10 23:38:29,597 | INFO     | mean x: 1768079025.5
[2026-01-11 00:39:44] 2026-01-10 23:38:29,597 | INFO     | mean y: 2482123.4633333334
[2026-01-11 00:39:44] 2026-01-10 23:38:29,597 | INFO     | intersect: -5078329844.01307
[2026-01-11 00:39:44] 2026-01-10 23:38:29,598 | INFO     | chi2: 3.759706425683718
[2026-01-11 00:39:44] 2026-01-10 23:38:29,598 | INFO     | current chi2=3.759706425683718 (change=56.89661667548408 %)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,598 | INFO     | sum of square deviations: 7960484140.0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,601 | INFO     | sum of deviations: -56367560875.00001
[2026-01-11 00:39:44] 2026-01-10 23:38:29,601 | INFO     | mean x: 1768079178.0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,602 | INFO     | mean y: 2511883.6237288136
[2026-01-11 00:39:44] 2026-01-10 23:38:29,602 | INFO     | intersect: 12522141210.80872
[2026-01-11 00:39:44] 2026-01-10 23:38:29,602 | INFO     | chi2: 1.0759510822800258
[2026-01-11 00:39:44] 2026-01-10 23:38:29,602 | INFO     | current chi2=1.0759510822800258 (change=71.3820452860396 %)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,603 | INFO     | sum of square deviations: 7562532492.5
[2026-01-11 00:39:44] 2026-01-10 23:38:29,606 | INFO     | sum of deviations: -66762723771.5
[2026-01-11 00:39:44] 2026-01-10 23:38:29,606 | INFO     | mean x: 1768079330.5
[2026-01-11 00:39:44] 2026-01-10 23:38:29,606 | INFO     | mean y: 2515840.9689655174
[2026-01-11 00:39:44] 2026-01-10 23:38:29,606 | INFO     | intersect: 15611280770.618643
[2026-01-11 00:39:44] 2026-01-10 23:38:29,607 | INFO     | chi2: 0.9870699632998399
[2026-01-11 00:39:44] 2026-01-10 23:38:29,607 | INFO     | current chi2=0.9870699632998399 (change=8.260702595497165 %)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,607 | INFO     | left removable region: 30
[2026-01-11 00:39:44] 2026-01-10 23:38:29,607 | INFO     | sum of square deviations: 6035722470.0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,610 | INFO     | sum of deviations: -19708958845.999996
[2026-01-11 00:39:44] 2026-01-10 23:38:29,610 | INFO     | mean x: 1768079605.0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,610 | INFO     | mean y: 2512299.230483271
[2026-01-11 00:39:44] 2026-01-10 23:38:29,610 | INFO     | intersect: 5775973280.016256
[2026-01-11 00:39:44] 2026-01-10 23:38:29,611 | INFO     | chi2: 0.13660493767249068
[2026-01-11 00:39:44] 2026-01-10 23:38:29,611 | INFO     | current memory leak: -3.27 B/s (using 269 data points, chi2=0.14)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,612 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,612 | INFO     | ..............................
[2026-01-11 00:39:44] 2026-01-10 23:38:29,612 | INFO     | . Timing measurements:
[2026-01-11 00:39:44] 2026-01-10 23:38:29,612 | INFO     | . get job = 0 s
[2026-01-11 00:39:44] 2026-01-10 23:38:29,612 | INFO     | . initial setup = 9 s
[2026-01-11 00:39:44] 2026-01-10 23:38:29,612 | INFO     | . payload setup = 145 s
[2026-01-11 00:39:44] 2026-01-10 23:38:29,612 | INFO     | . stage-in = 0 s
[2026-01-11 00:39:44] 2026-01-10 23:38:29,612 | INFO     | . payload execution = 18759 s
[2026-01-11 00:39:44] 2026-01-10 23:38:29,613 | INFO     | . stage-out = 3 s
[2026-01-11 00:39:44] 2026-01-10 23:38:29,613 | INFO     | . log creation = 1 s
[2026-01-11 00:39:44] 2026-01-10 23:38:29,613 | INFO     | ..............................
[2026-01-11 00:39:44] 2026-01-10 23:38:29,723 | INFO     | 
[2026-01-11 00:39:44] 2026-01-10 23:38:29,723 | INFO     | job summary report
[2026-01-11 00:39:44] 2026-01-10 23:38:29,723 | INFO     | --------------------------------------------------
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | PanDA job id: 6963157041
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | task id: 47898826
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | errors: (none)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | pilot state: finished 
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | transexitcode: 0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | exeerrorcode: 0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | exeerrordiag: 
[2026-01-11 00:39:44] 2026-01-10 23:38:29,724 | INFO     | exitcode: 0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | exitmsg: OK
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | cpuconsumptiontime: 70086 s
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | nevents: 400
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | neventsw: 0
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | pid: 28744
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | pgrp: 28744
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | corecount: 8
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | event service: False
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 34: 2284055, 44: 2284083, 55: 2284239, 66: 2284267, 76: 2284295, 87: 2284351, 98: 2284379, 107: 2284949, 
[2026-01-11 00:39:44] 2026-01-10 23:38:29,725 | INFO     | --------------------------------------------------
[2026-01-11 00:39:44] 2026-01-10 23:38:29,726 | INFO     | 
[2026-01-11 00:39:44] 2026-01-10 23:38:29,726 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-11 00:39:44] 2026-01-10 23:38:29,887 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,889 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,889 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 00:39:44] 2026-01-10 23:38:29,890 | INFO     | job 6963157041 has completed (purged errors)
[2026-01-11 00:39:44] 2026-01-10 23:38:29,890 | INFO     | overall cleanup function is called
[2026-01-11 00:39:44] 2026-01-10 23:38:30,898 | INFO     | --- collectZombieJob: --- 10, [28744]
[2026-01-11 00:39:44] 2026-01-10 23:38:30,899 | INFO     | zombie collector waiting for pid 28744
[2026-01-11 00:39:44] 2026-01-10 23:38:30,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 00:39:44] 2026-01-10 23:38:30,899 | INFO     | collected zombie processes
[2026-01-11 00:39:44] 2026-01-10 23:38:30,899 | INFO     | will attempt to kill all subprocesses of pid=28744
[2026-01-11 00:39:44] 2026-01-10 23:38:30,975 | INFO     | process IDs to be killed: [28744] (in reverse order)
[2026-01-11 00:39:44] 2026-01-10 23:38:31,969 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 00:39:44] 2026-01-10 23:38:31,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 00:39:44] 2026-01-10 23:38:31,971 | INFO     | did not find any defunct processes belonging to 28744
[2026-01-11 00:39:44] 2026-01-10 23:38:31,973 | INFO     | did not find any defunct processes belonging to 28744
[2026-01-11 00:39:44] 2026-01-10 23:38:31,973 | INFO     | ready for new job
[2026-01-11 00:39:44] 2026-01-10 23:38:31,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 00:39:44] 2026-01-10 23:38:31,975 | INFO     | ***************************************
[2026-01-11 00:39:44] 2026-01-10 23:38:31,976 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 00:39:44] 2026-01-10 23:38:31,976 | INFO     | ***************************************
[2026-01-11 00:39:44] 2026-01-10 23:38:31,976 | INFO     | 
[2026-01-11 00:39:44] 2026-01-10 23:38:31,976 | INFO     | pilot is running in a VM
[2026-01-11 00:39:44] 2026-01-10 23:38:31,976 | INFO     | architecture information:
[2026-01-11 00:39:44] 2026-01-10 23:38:31,995 | INFO     | executing command: cat /etc/os-release
[2026-01-11 00:39:44] 2026-01-10 23:38:32,315 | INFO     | cat /etc/os-release:
[2026-01-11 00:39:44] NAME="CentOS Linux"
[2026-01-11 00:39:44] VERSION="7 (Core)"
[2026-01-11 00:39:44] ID="centos"
[2026-01-11 00:39:44] ID_LIKE="rhel fedora"
[2026-01-11 00:39:44] VERSION_ID="7"
[2026-01-11 00:39:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 00:39:44] ANSI_COLOR="0;31"
[2026-01-11 00:39:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 00:39:44] HOME_URL="https://www.centos.org/"
[2026-01-11 00:39:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 00:39:44] 
[2026-01-11 00:39:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 00:39:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 00:39:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 00:39:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 00:39:44] 
[2026-01-11 00:39:44] 2026-01-10 23:38:32,315 | INFO     | ***************************************
[2026-01-11 00:39:44] 2026-01-10 23:38:32,819 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-11 00:39:44] 2026-01-10 23:38:33,036 | INFO     | sufficient remaining disk space (497210621952 B)
[2026-01-11 00:39:44] 2026-01-10 23:38:33,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 00:39:44] 2026-01-10 23:38:33,037 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 00:39:44] 2026-01-10 23:38:33,037 | INFO     | update_server=False
[2026-01-11 00:39:44] 2026-01-10 23:38:33,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 00:39:44] 2026-01-10 23:38:33,107 | INFO     | all payload control threads have been joined
[2026-01-11 00:39:44] 2026-01-10 23:38:33,422 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 00:39:44] 2026-01-10 23:38:33,423 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 00:39:44] 2026-01-10 23:38:33,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:39:44] 2026-01-10 23:38:33,423 | INFO     | will abort loop
[2026-01-11 00:39:44] 2026-01-10 23:38:33,625 | INFO     | all data control threads have been joined
[2026-01-11 00:39:44] 2026-01-10 23:38:34,043 | INFO     | [job] retrieve thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:34,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 00:39:44] 2026-01-10 23:38:34,114 | INFO     | [payload] control thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:34,146 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:34,429 | INFO     | [job] job monitor thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:34,632 | INFO     | [data] control thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:34,676 | INFO     | all job control threads have been joined
[2026-01-11 00:39:44] 2026-01-10 23:38:34,696 | INFO     | [payload] validate_post thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:34,717 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:34,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 00:39:44] 2026-01-10 23:38:35,164 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:35,184 | INFO     | [data] copytool_in thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:35,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 00:39:44] 2026-01-10 23:38:35,297 | INFO     | [payload] failed_post thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:35,321 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:35,469 | INFO     | [job] validate thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:35,682 | INFO     | [job] control thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:35,750 | INFO     | [job] queue monitor thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:36,112 | INFO     | [data] copytool_out thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:38:39,294 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 00:39:44] 2026-01-10 23:39:02,542 | INFO     | PID=22272 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 00:39:44] 2026-01-10 23:39:02,542 | INFO     | .. there are 2 such processes running
[2026-01-11 00:39:44] 2026-01-10 23:39:02,542 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 00:39:44] 2026-01-10 23:39:02,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 00:39:44] 2026-01-10 23:39:02,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 00:39:44] 2026-01-10 23:39:32,125 | INFO     | [monitor] cgroup control has ended
[2026-01-11 00:39:44] 2026-01-10 23:39:32,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483205007168)>', '<ExcThread(monitor, started 140482466277120)>']
[2026-01-11 00:39:44] 2026-01-10 23:39:33,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 00:39:44] 2026-01-10 23:39:33,729 | INFO     | [monitor] control thread has ended
[2026-01-11 00:39:44] 2026-01-10 23:39:38,017 | INFO     | all workflow threads have been joined
[2026-01-11 00:39:44] 2026-01-10 23:39:38,018 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 00:39:44] 2026-01-10 23:39:38,018 | INFO     | traces error code: 0
[2026-01-11 00:39:44] 2026-01-10 23:39:38,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 00:39:44] 2026-01-10 23:39:38,462 [wrapper] ==== pilot stdout END ====
[2026-01-11 00:39:44] 2026-01-10 23:39:38,557 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 00:39:44] 2026-01-10 23:39:38,619 [wrapper] pilotpid: 22272
[2026-01-11 00:39:44] 2026-01-10 23:39:38,712 [wrapper] Pilot exit status: 0
[2026-01-11 00:39:44] 2026-01-10 23:39:39,197 [wrapper] pandaids: 6963157041
[2026-01-11 00:39:44] 2026-01-10 23:39:40,432 [wrapper] cleanup supervisor_pilot 25225 22273
[2026-01-11 00:39:44] 2026-01-10 23:39:40,562 [wrapper] Test setup, not cleaning
[2026-01-11 00:39:44] 2026-01-10 23:39:40,676 [wrapper] apfmon messages muted
[2026-01-11 00:39:44] 2026-01-10 23:39:40,777 [wrapper] ==== wrapper stdout END ====
[2026-01-11 00:39:44] 2026-01-10 23:39:40,879 [wrapper] ==== wrapper stderr END ====
[2026-01-11 00:39:44]  *** Error codes and diagnostics ***
[2026-01-11 00:39:44]     "exeErrorCode": 0,
[2026-01-11 00:39:44]     "exeErrorDiag": "",
[2026-01-11 00:39:44]     "pilotErrorCode": 0,
[2026-01-11 00:39:44]     "pilotErrorDiag": "",
[2026-01-11 00:39:44]  *** Listing of results directory ***
[2026-01-11 00:39:44] total 437620
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-11 00:39:44] -rwx------. 1 boinc boinc     36322 Jan  8 22:45 runpilot2-wrapper.sh
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:45 queuedata.json
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc       100 Jan 10 19:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 00:39:44] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 19:13 run_atlas
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc       105 Jan 10 19:13 job.xml
[2026-01-11 00:39:44] -rw-r--r--. 2 boinc boinc 222469190 Jan 10 19:13 EVNT.47898824._001222.pool.root.1
[2026-01-11 00:39:44] -rw-r--r--. 2 boinc boinc    592395 Jan 10 19:13 input.tar.gz
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc      6390 Jan 10 19:13 init_data.xml
[2026-01-11 00:39:44] -rw-r--r--. 2 boinc boinc     15847 Jan 10 19:13 start_atlas.sh
[2026-01-11 00:39:44] drwxrwx--x. 2 boinc boinc        68 Jan 10 19:13 shared
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc         0 Jan 10 19:13 boinc_lockfile
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc      2520 Jan 10 19:13 pandaJob.out
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc    989548 Jan 10 19:17 agis_schedconf.cvmfs.json
[2026-01-11 00:39:44] drwx------. 5 boinc boinc      4096 Jan 10 19:17 pilot3
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc 215574150 Jan 11 00:35 HITS.47898826._032170.pool.root.1
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc       531 Jan 11 00:35 boinc_task_state.xml
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc      1013 Jan 11 00:36 memory_monitor_summary.json
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc   1516240 Jan 11 00:36 agis_ddmendpoints.agis.ALL.json
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc    528022 Jan 11 00:36 log.47898826._032170.job.log.tgz.1
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc        95 Jan 11 00:38 pilot_heartbeat.json
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc      7779 Jan 11 00:38 heartbeat.json
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc      8192 Jan 11 00:39 boinc_mmap_file
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc        28 Jan 11 00:39 wrapper_checkpoint.txt
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc      5070 Jan 11 00:39 pilotlog.txt
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc   2563433 Jan 11 00:39 log.47898826._032170.job.log.1
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc       357 Jan 11 00:39 output.list
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc       620 Jan 11 00:39 runtime_log
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc   3112960 Jan 11 00:39 result.tar.gz
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc       657 Jan 11 00:39 UuYLDmP0Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTPlKDmiow1ym.diag
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc      8817 Jan 11 00:39 runtime_log.err
[2026-01-11 00:39:44] -rw-r--r--. 1 boinc boinc     20725 Jan 11 00:39 stderr.txt
[2026-01-11 00:39:44] HITS file was successfully produced:
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc 215574150 Jan 11 00:35 shared/HITS.pool.root.1
[2026-01-11 00:39:44]  *** Contents of shared directory: ***
[2026-01-11 00:39:44] total 431416
[2026-01-11 00:39:44] -rw-r--r--. 2 boinc boinc 222469190 Jan 10 19:13 ATLAS.root_0
[2026-01-11 00:39:44] -rw-r--r--. 2 boinc boinc    592395 Jan 10 19:13 input.tar.gz
[2026-01-11 00:39:44] -rw-r--r--. 2 boinc boinc     15847 Jan 10 19:13 start_atlas.sh
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc 215574150 Jan 11 00:35 HITS.pool.root.1
[2026-01-11 00:39:44] -rw-------. 1 boinc boinc   3112960 Jan 11 00:39 result.tar.gz
00:39:46 (18517): run_atlas exited; CPU time 70264.962075
00:39:46 (18517): called boinc_finish(0)

</stderr_txt>
]]>

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