Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:38:14 (25440): wrapper (7.7.26015): starting
05:38:14 (25440): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 05:38:14] Arguments: --nthreads 8
[2026-01-10 05:38:14] Threads: 8
[2026-01-10 05:38:14] Checking for CVMFS
[2026-01-10 05:38:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:38:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:38:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:38:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:38:17] 2.11.2.0 30928 36368 124324 154968 1 88 22229083 25165824 1088 130560 0 17485470 99.798 13831644 2990 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 05:38:17] CVMFS is ok
[2026-01-10 05:38:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:38:17] Checking for apptainer binary...
[2026-01-10 05:38:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:38:17] Running /usr/bin/apptainer --version
[2026-01-10 05:38:17] apptainer version 1.3.2-1.el7
[2026-01-10 05:38:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:38:24] cg-vwn464.simple-grid.lan
[2026-01-10 05:38:24] apptainer works
[2026-01-10 05:38:24] Set ATHENA_PROC_NUMBER=8
[2026-01-10 05:38:24] Set ATHENA_CORE_NUMBER=8
[2026-01-10 05:38:24] Starting ATLAS job with PandaID=6963157171
[2026-01-10 05:38:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 08:52:47]  *** The last 200 lines of the pilot log: ***
[2026-01-10 08:52:47] 2026-01-10 07:51:52,842 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6963157171/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 08:52:47] 2026-01-10 07:51:52,843 | INFO     | extracted standard info from prmon json
[2026-01-10 08:52:47] 2026-01-10 07:51:52,843 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 08:52:47] 2026-01-10 07:51:52,843 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 08:52:47] 2026-01-10 07:51:52,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 08:52:47] 2026-01-10 07:51:52,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 08:52:47] 2026-01-10 07:51:52,847 | INFO     | fitting pss+swap vs Time
[2026-01-10 08:52:47] 2026-01-10 07:51:52,848 | INFO     | sum of square deviations: 1748737904.5
[2026-01-10 08:52:47] 2026-01-10 07:51:52,849 | INFO     | sum of deviations: 73430934165.99998
[2026-01-10 08:52:47] 2026-01-10 07:51:52,849 | INFO     | mean x: 1768026095.5
[2026-01-10 08:52:47] 2026-01-10 07:51:52,849 | INFO     | mean y: 2401292.1011235956
[2026-01-10 08:52:47] 2026-01-10 07:51:52,849 | INFO     | intersect: -74238459781.67479
[2026-01-10 08:52:47] 2026-01-10 07:51:52,850 | INFO     | chi2: 7.064722017513441
[2026-01-10 08:52:47] 2026-01-10 07:51:52,850 | INFO     | sum of square deviations: 1605470102.0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,851 | INFO     | sum of deviations: 82687157613.99997
[2026-01-10 08:52:47] 2026-01-10 07:51:52,852 | INFO     | mean x: 1768025943.0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,852 | INFO     | mean y: 2410859.0693641617
[2026-01-10 08:52:47] 2026-01-10 07:51:52,852 | INFO     | intersect: -91056924118.49469
[2026-01-10 08:52:47] 2026-01-10 07:51:52,852 | INFO     | chi2: 6.373608772238743
[2026-01-10 08:52:47] 2026-01-10 07:51:52,852 | INFO     | current chi2=6.373608772238743 (change=9.782596449816833 %)
[2026-01-10 08:52:47] 2026-01-10 07:51:52,852 | INFO     | right removable region: 172
[2026-01-10 08:52:47] 2026-01-10 07:51:52,853 | INFO     | sum of square deviations: 1605470102.0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,854 | INFO     | sum of deviations: 14310975088.999998
[2026-01-10 08:52:47] 2026-01-10 07:51:52,854 | INFO     | mean x: 1768026248.0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,854 | INFO     | mean y: 2464155.8843930634
[2026-01-10 08:52:47] 2026-01-10 07:51:52,854 | INFO     | intersect: -15757517646.521124
[2026-01-10 08:52:47] 2026-01-10 07:51:52,854 | INFO     | chi2: 2.356595737311363
[2026-01-10 08:52:47] 2026-01-10 07:51:52,854 | INFO     | current chi2=2.356595737311363 (change=66.64276766347828 %)
[2026-01-10 08:52:47] 2026-01-10 07:51:52,855 | INFO     | sum of square deviations: 1470248962.0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,856 | INFO     | sum of deviations: -16366698909.499996
[2026-01-10 08:52:47] 2026-01-10 07:51:52,856 | INFO     | mean x: 1768026400.5
[2026-01-10 08:52:47] 2026-01-10 07:51:52,856 | INFO     | mean y: 2498473.636904762
[2026-01-10 08:52:47] 2026-01-10 07:51:52,856 | INFO     | intersect: 19684033036.101406
[2026-01-10 08:52:47] 2026-01-10 07:51:52,857 | INFO     | chi2: 0.8828720563952644
[2026-01-10 08:52:47] 2026-01-10 07:51:52,857 | INFO     | current chi2=0.8828720563952644 (change=62.53612605603149 %)
[2026-01-10 08:52:47] 2026-01-10 07:51:52,857 | INFO     | sum of square deviations: 1342841922.0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,858 | INFO     | sum of deviations: -16131395771.000002
[2026-01-10 08:52:47] 2026-01-10 07:51:52,858 | INFO     | mean x: 1768026553.0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,858 | INFO     | mean y: 2498118.8404907975
[2026-01-10 08:52:47] 2026-01-10 07:51:52,858 | INFO     | intersect: 21241584859.297432
[2026-01-10 08:52:47] 2026-01-10 07:51:52,859 | INFO     | chi2: 0.8650815506474698
[2026-01-10 08:52:47] 2026-01-10 07:51:52,859 | INFO     | current chi2=0.8650815506474698 (change=2.0150717897259796 %)
[2026-01-10 08:52:47] 2026-01-10 07:51:52,859 | INFO     | left removable region: 30
[2026-01-10 08:52:47] 2026-01-10 07:51:52,859 | INFO     | sum of square deviations: 887813855.5
[2026-01-10 08:52:47] 2026-01-10 07:51:52,860 | INFO     | sum of deviations: 2900247317.9999995
[2026-01-10 08:52:47] 2026-01-10 07:51:52,860 | INFO     | mean x: 1768026827.5
[2026-01-10 08:52:47] 2026-01-10 07:51:52,860 | INFO     | mean y: 2500332.2253521127
[2026-01-10 08:52:47] 2026-01-10 07:51:52,860 | INFO     | intersect: -5773164276.794621
[2026-01-10 08:52:47] 2026-01-10 07:51:52,861 | INFO     | chi2: 0.0009340954696740717
[2026-01-10 08:52:47] 2026-01-10 07:51:52,861 | INFO     | current memory leak: 3.27 B/s (using 142 data points, chi2=0.00)
[2026-01-10 08:52:47] 2026-01-10 07:51:52,861 | INFO     | could have reported an average CPU frequency of 2250 MHz (9 samples)
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | ..............................
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | . Timing measurements:
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | . get job = 0 s
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | . initial setup = 8 s
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | . payload setup = 152 s
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | . stage-in = 0 s
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | . payload execution = 10989 s
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | . stage-out = 1 s
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | . log creation = 0 s
[2026-01-10 08:52:47] 2026-01-10 07:51:52,862 | INFO     | ..............................
[2026-01-10 08:52:47] 2026-01-10 07:51:52,971 | INFO     | 
[2026-01-10 08:52:47] 2026-01-10 07:51:52,971 | INFO     | job summary report
[2026-01-10 08:52:47] 2026-01-10 07:51:52,971 | INFO     | --------------------------------------------------
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | PanDA job id: 6963157171
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | task id: 47898826
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | errors: (none)
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | pilot state: finished 
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | transexitcode: 0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | exeerrorcode: 0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | exeerrordiag: 
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | exitcode: 0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,972 | INFO     | exitmsg: OK
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | cpuconsumptiontime: 71768 s
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | nevents: 400
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | neventsw: 0
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | pid: 3300
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | pgrp: 3300
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | corecount: 8
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | event service: False
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | sizes: {0: 2283141, 1: 2283827, 2: 2284026, 13: 2284026, 23: 2284082, 34: 2284110, 45: 2284266, 55: 2284294, 66: 2284322, 77: 2284350, 88: 2284406, 98: 2284714, 10
[2026-01-10 08:52:47] 2026-01-10 07:51:52,973 | INFO     | --------------------------------------------------
[2026-01-10 08:52:47] 2026-01-10 07:51:52,974 | INFO     | 
[2026-01-10 08:52:47] 2026-01-10 07:51:52,974 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-10 08:52:47] 2026-01-10 07:51:53,015 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,017 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 08:52:47] 2026-01-10 07:51:53,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,017 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 08:52:47] 2026-01-10 07:51:53,017 | INFO     | job 6963157171 has completed (purged errors)
[2026-01-10 08:52:47] 2026-01-10 07:51:53,017 | INFO     | overall cleanup function is called
[2026-01-10 08:52:47] 2026-01-10 07:51:54,025 | INFO     | --- collectZombieJob: --- 10, [3300]
[2026-01-10 08:52:47] 2026-01-10 07:51:54,026 | INFO     | zombie collector waiting for pid 3300
[2026-01-10 08:52:47] 2026-01-10 07:51:54,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 08:52:47] 2026-01-10 07:51:54,026 | INFO     | collected zombie processes
[2026-01-10 08:52:47] 2026-01-10 07:51:54,026 | INFO     | will attempt to kill all subprocesses of pid=3300
[2026-01-10 08:52:47] 2026-01-10 07:51:54,091 | INFO     | process IDs to be killed: [3300] (in reverse order)
[2026-01-10 08:52:47] 2026-01-10 07:51:54,146 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 08:52:47] 2026-01-10 07:51:54,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 08:52:47] 2026-01-10 07:51:54,149 | INFO     | did not find any defunct processes belonging to 3300
[2026-01-10 08:52:47] 2026-01-10 07:51:54,150 | INFO     | did not find any defunct processes belonging to 3300
[2026-01-10 08:52:47] 2026-01-10 07:51:54,151 | INFO     | ready for new job
[2026-01-10 08:52:47] 2026-01-10 07:51:54,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 08:52:47] 2026-01-10 07:51:54,152 | INFO     | ***************************************
[2026-01-10 08:52:47] 2026-01-10 07:51:54,153 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 08:52:47] 2026-01-10 07:51:54,153 | INFO     | ***************************************
[2026-01-10 08:52:47] 2026-01-10 07:51:54,153 | INFO     | 
[2026-01-10 08:52:47] 2026-01-10 07:51:54,153 | INFO     | pilot is running in a VM
[2026-01-10 08:52:47] 2026-01-10 07:51:54,153 | INFO     | architecture information:
[2026-01-10 08:52:47] 2026-01-10 07:51:54,154 | INFO     | executing command: cat /etc/os-release
[2026-01-10 08:52:47] 2026-01-10 07:51:54,177 | INFO     | cat /etc/os-release:
[2026-01-10 08:52:47] NAME="CentOS Linux"
[2026-01-10 08:52:47] VERSION="7 (Core)"
[2026-01-10 08:52:47] ID="centos"
[2026-01-10 08:52:47] ID_LIKE="rhel fedora"
[2026-01-10 08:52:47] VERSION_ID="7"
[2026-01-10 08:52:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 08:52:47] ANSI_COLOR="0;31"
[2026-01-10 08:52:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 08:52:47] HOME_URL="https://www.centos.org/"
[2026-01-10 08:52:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 08:52:47] 
[2026-01-10 08:52:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 08:52:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 08:52:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 08:52:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 08:52:47] 
[2026-01-10 08:52:47] 2026-01-10 07:51:54,177 | INFO     | ***************************************
[2026-01-10 08:52:47] 2026-01-10 07:51:54,680 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-10 08:52:47] 2026-01-10 07:51:54,702 | INFO     | sufficient remaining disk space (497988665344 B)
[2026-01-10 08:52:47] 2026-01-10 07:51:54,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 08:52:47] 2026-01-10 07:51:54,703 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 08:52:47] 2026-01-10 07:51:54,703 | INFO     | update_server=False
[2026-01-10 08:52:47] 2026-01-10 07:51:54,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 08:52:47] 2026-01-10 07:51:54,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:52:47] 2026-01-10 07:51:54,822 | INFO     | all data control threads have been joined
[2026-01-10 08:52:47] 2026-01-10 07:51:55,023 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 08:52:47] 2026-01-10 07:51:55,023 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 08:52:47] 2026-01-10 07:51:55,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:52:47] 2026-01-10 07:51:55,024 | INFO     | will abort loop
[2026-01-10 08:52:47] 2026-01-10 07:51:55,148 | INFO     | all payload control threads have been joined
[2026-01-10 08:52:47] 2026-01-10 07:51:55,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 08:52:47] 2026-01-10 07:51:55,707 | INFO     | [job] retrieve thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:55,709 | INFO     | [job] queue monitor thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:55,721 | INFO     | [payload] failed_post thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:55,736 | INFO     | all job control threads have been joined
[2026-01-10 08:52:47] 2026-01-10 07:51:55,828 | INFO     | [data] control thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:55,923 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:56,029 | INFO     | [job] job monitor thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:56,154 | INFO     | [payload] control thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:56,314 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:56,344 | INFO     | [payload] validate_post thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:56,520 | INFO     | [data] copytool_in thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:56,741 | INFO     | [job] control thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:57,140 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:57,163 | INFO     | [job] validate thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:57,198 | INFO     | [data] copytool_out thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:51:57,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 08:52:47] 2026-01-10 07:52:01,799 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:52:04,832 | INFO     | job.realtimelogging is not enabled
[2026-01-10 08:52:47] 2026-01-10 07:52:05,838 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 08:52:47] 2026-01-10 07:52:25,818 | INFO     | PID=29179 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 08:52:47] 2026-01-10 07:52:25,818 | INFO     | .. there are 2 such processes running
[2026-01-10 08:52:47] 2026-01-10 07:52:25,819 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 08:52:47] 2026-01-10 07:52:25,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 08:52:47] 2026-01-10 07:52:25,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 08:52:47] 2026-01-10 07:52:42,121 | INFO     | [monitor] cgroup control has ended
[2026-01-10 08:52:47] 2026-01-10 07:52:42,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677338240832)>', '<ExcThread(monitor, started 139676623038208)>']
[2026-01-10 08:52:47] 2026-01-10 07:52:42,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 08:52:47] 2026-01-10 07:52:42,908 | INFO     | [monitor] control thread has ended
[2026-01-10 08:52:47] 2026-01-10 07:52:47,482 | INFO     | all workflow threads have been joined
[2026-01-10 08:52:47] 2026-01-10 07:52:47,483 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 08:52:47] 2026-01-10 07:52:47,483 | INFO     | traces error code: 0
[2026-01-10 08:52:47] 2026-01-10 07:52:47,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 08:52:47] 2026-01-10 07:52:47,617 [wrapper] ==== pilot stdout END ====
[2026-01-10 08:52:47] 2026-01-10 07:52:47,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 08:52:47] 2026-01-10 07:52:47,625 [wrapper] pilotpid: 29179
[2026-01-10 08:52:47] 2026-01-10 07:52:47,630 [wrapper] Pilot exit status: 0
[2026-01-10 08:52:47] 2026-01-10 07:52:47,651 [wrapper] pandaids: 6963157171
[2026-01-10 08:52:47] 2026-01-10 07:52:47,693 [wrapper] cleanup supervisor_pilot  2246 29180
[2026-01-10 08:52:47] 2026-01-10 07:52:47,698 [wrapper] Test setup, not cleaning
[2026-01-10 08:52:47] 2026-01-10 07:52:47,710 [wrapper] apfmon messages muted
[2026-01-10 08:52:47] 2026-01-10 07:52:47,713 [wrapper] ==== wrapper stdout END ====
[2026-01-10 08:52:47] 2026-01-10 07:52:47,718 [wrapper] ==== wrapper stderr END ====
[2026-01-10 08:52:47]  *** Error codes and diagnostics ***
[2026-01-10 08:52:47]     "exeErrorCode": 0,
[2026-01-10 08:52:47]     "exeErrorDiag": "",
[2026-01-10 08:52:47]     "pilotErrorCode": 0,
[2026-01-10 08:52:47]     "pilotErrorDiag": "",
[2026-01-10 08:52:47]  *** Listing of results directory ***
[2026-01-10 08:52:47] total 436328
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:45 queuedata.json
[2026-01-10 08:52:47] -rwx------. 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc       100 Jan 10 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 08:52:47] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 05:38 run_atlas
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc       105 Jan 10 05:38 job.xml
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc      6392 Jan 10 05:38 init_data.xml
[2026-01-10 08:52:47] -rw-r--r--. 2 boinc boinc 220660494 Jan 10 05:38 EVNT.47898824._001248.pool.root.1
[2026-01-10 08:52:47] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:38 start_atlas.sh
[2026-01-10 08:52:47] drwxrwx--x. 2 boinc boinc        68 Jan 10 05:38 shared
[2026-01-10 08:52:47] -rw-r--r--. 2 boinc boinc    592397 Jan 10 05:38 input.tar.gz
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc         0 Jan 10 05:38 boinc_lockfile
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc      2519 Jan 10 05:38 pandaJob.out
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc    989374 Jan 10 05:42 agis_schedconf.cvmfs.json
[2026-01-10 08:52:47] drwx------. 5 boinc boinc      4096 Jan 10 05:42 pilot3
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc 218349531 Jan 10 08:51 HITS.47898826._032300.pool.root.1
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc       531 Jan 10 08:51 boinc_task_state.xml
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc      1022 Jan 10 08:51 memory_monitor_summary.json
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc   1516240 Jan 10 08:51 agis_ddmendpoints.agis.ALL.json
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc    402645 Jan 10 08:51 log.47898826._032300.job.log.tgz.1
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc      7785 Jan 10 08:51 heartbeat.json
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc        95 Jan 10 08:52 pilot_heartbeat.json
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc      8192 Jan 10 08:52 boinc_mmap_file
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc        28 Jan 10 08:52 wrapper_checkpoint.txt
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc      5143 Jan 10 08:52 pilotlog.txt
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc   1540693 Jan 10 08:52 log.47898826._032300.job.log.1
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc       357 Jan 10 08:52 output.list
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc       620 Jan 10 08:52 runtime_log
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc   1966080 Jan 10 08:52 result.tar.gz
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc      8833 Jan 10 08:52 runtime_log.err
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc       657 Jan 10 08:52 FALLDmd0Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRDgKDmUemUsm.diag
[2026-01-10 08:52:47] -rw-r--r--. 1 boinc boinc     20765 Jan 10 08:52 stderr.txt
[2026-01-10 08:52:47] HITS file was successfully produced:
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc 218349531 Jan 10 08:51 shared/HITS.pool.root.1
[2026-01-10 08:52:47]  *** Contents of shared directory: ***
[2026-01-10 08:52:47] total 431240
[2026-01-10 08:52:47] -rw-r--r--. 2 boinc boinc 220660494 Jan 10 05:38 ATLAS.root_0
[2026-01-10 08:52:47] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:38 start_atlas.sh
[2026-01-10 08:52:47] -rw-r--r--. 2 boinc boinc    592397 Jan 10 05:38 input.tar.gz
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc 218349531 Jan 10 08:51 HITS.pool.root.1
[2026-01-10 08:52:47] -rw-------. 1 boinc boinc   1966080 Jan 10 08:52 result.tar.gz
08:52:49 (25440): run_atlas exited; CPU time 71860.771259
08:52:49 (25440): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN