Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:16:13 (9743): wrapper (7.7.26015): starting
22:16:13 (9743): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 22:16:13] Arguments: --nthreads 8
[2026-01-09 22:16:13] Threads: 8
[2026-01-09 22:16:13] Checking for CVMFS
[2026-01-09 22:16:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:16:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:16:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:16:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:16:14] 2.11.2.0 11275 35944 128340 154956 0 57 21878517 25165825 0 130560 0 15764290 99.845 13126483 3179 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 22:16:14] CVMFS is ok
[2026-01-09 22:16:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:16:14] Checking for apptainer binary...
[2026-01-09 22:16:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:16:14] Running /usr/bin/apptainer --version
[2026-01-09 22:16:14] apptainer version 1.3.2-1.el7
[2026-01-09 22:16:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:16:15] cg-vwn441.simple-grid.lan
[2026-01-09 22:16:15] apptainer works
[2026-01-09 22:16:15] Set ATHENA_PROC_NUMBER=8
[2026-01-09 22:16:15] Set ATHENA_CORE_NUMBER=8
[2026-01-09 22:16:15] Starting ATLAS job with PandaID=6963146904
[2026-01-09 22:16:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:53:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:53:19] 2026-01-10 02:52:09,303 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 03:53:19] 2026-01-10 02:52:09,304 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 03:53:19] 2026-01-10 02:52:09,306 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963146904/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,307 | INFO     | extracted standard info from prmon json
[2026-01-10 03:53:19] 2026-01-10 02:52:09,307 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 03:53:19] 2026-01-10 02:52:09,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 03:53:19] 2026-01-10 02:52:09,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 03:53:19] 2026-01-10 02:52:09,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 03:53:19] 2026-01-10 02:52:09,315 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:53:19] 2026-01-10 02:52:09,316 | INFO     | sum of square deviations: 10941980042.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,319 | INFO     | sum of deviations: -64059596489.500015
[2026-01-10 03:53:19] 2026-01-10 02:52:09,320 | INFO     | mean x: 1768003403.5
[2026-01-10 03:53:19] 2026-01-10 02:52:09,320 | INFO     | mean y: 2530904.387195122
[2026-01-10 03:53:19] 2026-01-10 02:52:09,320 | INFO     | intersect: 10353270367.038527
[2026-01-10 03:53:19] 2026-01-10 02:52:09,321 | INFO     | chi2: 2.5571252406482383
[2026-01-10 03:53:19] 2026-01-10 02:52:09,321 | INFO     | sum of square deviations: 10449170802.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,325 | INFO     | sum of deviations: -40959359510.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,325 | INFO     | mean x: 1768003251.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,325 | INFO     | mean y: 2537969.470588235
[2026-01-10 03:53:19] 2026-01-10 02:52:09,326 | INFO     | intersect: 6932875519.192438
[2026-01-10 03:53:19] 2026-01-10 02:52:09,326 | INFO     | chi2: 1.7906197623753972
[2026-01-10 03:53:19] 2026-01-10 02:52:09,326 | INFO     | current chi2=1.7906197623753972 (change=29.975281072996246 %)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,327 | INFO     | sum of square deviations: 9971385099.5
[2026-01-10 03:53:19] 2026-01-10 02:52:09,335 | INFO     | time since job start (20136s) is within the limit (349056.0s)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,344 | INFO     | sum of deviations: -40016057797.49999
[2026-01-10 03:53:19] 2026-01-10 02:52:09,344 | INFO     | mean x: 1768003098.5
[2026-01-10 03:53:19] 2026-01-10 02:52:09,344 | INFO     | mean y: 2538270.5817610063
[2026-01-10 03:53:19] 2026-01-10 02:52:09,344 | INFO     | intersect: 7097692401.102971
[2026-01-10 03:53:19] 2026-01-10 02:52:09,345 | INFO     | chi2: 1.7895440250744148
[2026-01-10 03:53:19] 2026-01-10 02:52:09,345 | INFO     | current chi2=1.7895440250744148 (change=0.06007625536062313 %)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,345 | INFO     | right removable region: 317
[2026-01-10 03:53:19] 2026-01-10 02:52:09,346 | INFO     | sum of square deviations: 10449170802.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,349 | INFO     | sum of deviations: -115252142728.99998
[2026-01-10 03:53:19] 2026-01-10 02:52:09,350 | INFO     | mean x: 1768003556.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,350 | INFO     | mean y: 2546636.8916408666
[2026-01-10 03:53:19] 2026-01-10 02:52:09,350 | INFO     | intersect: 19503251720.82903
[2026-01-10 03:53:19] 2026-01-10 02:52:09,350 | INFO     | chi2: 1.077385071464386
[2026-01-10 03:53:19] 2026-01-10 02:52:09,350 | INFO     | current chi2=1.077385071464386 (change=57.86733264612155 %)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,351 | INFO     | sum of square deviations: 9971385099.5
[2026-01-10 03:53:19] 2026-01-10 02:52:09,355 | INFO     | sum of deviations: -115876813961.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,355 | INFO     | mean x: 1768003708.5
[2026-01-10 03:53:19] 2026-01-10 02:52:09,355 | INFO     | mean y: 2546819.396226415
[2026-01-10 03:53:19] 2026-01-10 02:52:09,355 | INFO     | intersect: 20548402261.533897
[2026-01-10 03:53:19] 2026-01-10 02:52:09,356 | INFO     | chi2: 1.054618279062191
[2026-01-10 03:53:19] 2026-01-10 02:52:09,356 | INFO     | current chi2=1.054618279062191 (change=2.113152762665471 %)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,356 | INFO     | left removable region: 20
[2026-01-10 03:53:19] 2026-01-10 02:52:09,356 | INFO     | sum of square deviations: 8123493708.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,366 | INFO     | sum of deviations: -72522819419.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,366 | INFO     | mean x: 1768003678.0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,366 | INFO     | mean y: 2548529.373737374
[2026-01-10 03:53:19] 2026-01-10 02:52:09,366 | INFO     | intersect: 15786473042.7208
[2026-01-10 03:53:19] 2026-01-10 02:52:09,367 | INFO     | chi2: 0.2522494226804212
[2026-01-10 03:53:19] 2026-01-10 02:52:09,367 | INFO     | current memory leak: -8.93 B/s (using 297 data points, chi2=0.25)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,368 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,368 | INFO     | ..............................
[2026-01-10 03:53:19] 2026-01-10 02:52:09,368 | INFO     | . Timing measurements:
[2026-01-10 03:53:19] 2026-01-10 02:52:09,368 | INFO     | . get job = 0 s
[2026-01-10 03:53:19] 2026-01-10 02:52:09,368 | INFO     | . initial setup = 2 s
[2026-01-10 03:53:19] 2026-01-10 02:52:09,369 | INFO     | . payload setup = 9 s
[2026-01-10 03:53:19] 2026-01-10 02:52:09,369 | INFO     | . stage-in = 0 s
[2026-01-10 03:53:19] 2026-01-10 02:52:09,369 | INFO     | . payload execution = 19988 s
[2026-01-10 03:53:19] 2026-01-10 02:52:09,369 | INFO     | . stage-out = 4 s
[2026-01-10 03:53:19] 2026-01-10 02:52:09,369 | INFO     | . log creation = 1 s
[2026-01-10 03:53:19] 2026-01-10 02:52:09,369 | INFO     | ..............................
[2026-01-10 03:53:19] 2026-01-10 02:52:09,492 | INFO     | 
[2026-01-10 03:53:19] 2026-01-10 02:52:09,492 | INFO     | job summary report
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | --------------------------------------------------
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | PanDA job id: 6963146904
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | task id: 47898826
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | errors: (none)
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | pilot state: finished 
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | transexitcode: 0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | exeerrorcode: 0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,493 | INFO     | exeerrordiag: 
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | exitcode: 0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | exitmsg: OK
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | cpuconsumptiontime: 83600 s
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | nevents: 400
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | neventsw: 0
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | pid: 19929
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | pgrp: 19929
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | corecount: 8
[2026-01-10 03:53:19] 2026-01-10 02:52:09,494 | INFO     | event service: False
[2026-01-10 03:53:19] 2026-01-10 02:52:09,495 | INFO     | sizes: {0: 2283970, 1: 2283970, 6: 2284260, 12: 2284288, 20001: 2316648, 20002: 2316647, 20006: 2325829, 20008: 2325885, 20118: 2326079}
[2026-01-10 03:53:19] 2026-01-10 02:52:09,495 | INFO     | --------------------------------------------------
[2026-01-10 03:53:19] 2026-01-10 02:52:09,495 | INFO     | 
[2026-01-10 03:53:19] 2026-01-10 02:52:09,495 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 03:53:19] 2026-01-10 02:52:10,083 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,085 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:53:19] 2026-01-10 02:52:10,086 | INFO     | job 6963146904 has completed (purged errors)
[2026-01-10 03:53:19] 2026-01-10 02:52:10,086 | INFO     | overall cleanup function is called
[2026-01-10 03:53:19] 2026-01-10 02:52:11,095 | INFO     | --- collectZombieJob: --- 10, [19929]
[2026-01-10 03:53:19] 2026-01-10 02:52:11,095 | INFO     | zombie collector waiting for pid 19929
[2026-01-10 03:53:19] 2026-01-10 02:52:11,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:53:19] 2026-01-10 02:52:11,095 | INFO     | collected zombie processes
[2026-01-10 03:53:19] 2026-01-10 02:52:11,095 | INFO     | will attempt to kill all subprocesses of pid=19929
[2026-01-10 03:53:19] 2026-01-10 02:52:11,187 | INFO     | process IDs to be killed: [19929] (in reverse order)
[2026-01-10 03:53:19] 2026-01-10 02:52:12,059 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:53:19] 2026-01-10 02:52:12,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:53:19] 2026-01-10 02:52:12,062 | INFO     | did not find any defunct processes belonging to 19929
[2026-01-10 03:53:19] 2026-01-10 02:52:12,063 | INFO     | did not find any defunct processes belonging to 19929
[2026-01-10 03:53:19] 2026-01-10 02:52:12,064 | INFO     | ready for new job
[2026-01-10 03:53:19] 2026-01-10 02:52:12,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:53:19] 2026-01-10 02:52:12,066 | INFO     | ***************************************
[2026-01-10 03:53:19] 2026-01-10 02:52:12,066 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:53:19] 2026-01-10 02:52:12,066 | INFO     | ***************************************
[2026-01-10 03:53:19] 2026-01-10 02:52:12,066 | INFO     | 
[2026-01-10 03:53:19] 2026-01-10 02:52:12,067 | INFO     | pilot is running in a VM
[2026-01-10 03:53:19] 2026-01-10 02:52:12,067 | INFO     | architecture information:
[2026-01-10 03:53:19] 2026-01-10 02:52:12,083 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:53:19] 2026-01-10 02:52:12,403 | INFO     | cat /etc/os-release:
[2026-01-10 03:53:19] NAME="CentOS Linux"
[2026-01-10 03:53:19] VERSION="7 (Core)"
[2026-01-10 03:53:19] ID="centos"
[2026-01-10 03:53:19] ID_LIKE="rhel fedora"
[2026-01-10 03:53:19] VERSION_ID="7"
[2026-01-10 03:53:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:53:19] ANSI_COLOR="0;31"
[2026-01-10 03:53:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:53:19] HOME_URL="https://www.centos.org/"
[2026-01-10 03:53:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:53:19] 
[2026-01-10 03:53:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:53:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:53:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:53:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:53:19] 
[2026-01-10 03:53:19] 2026-01-10 02:52:12,404 | INFO     | ***************************************
[2026-01-10 03:53:19] 2026-01-10 02:52:12,907 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 03:53:19] 2026-01-10 02:52:13,264 | INFO     | sufficient remaining disk space (497084792832 B)
[2026-01-10 03:53:19] 2026-01-10 02:52:13,264 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:53:19] 2026-01-10 02:52:13,264 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:53:19] 2026-01-10 02:52:13,264 | INFO     | update_server=False
[2026-01-10 03:53:19] 2026-01-10 02:52:13,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:53:19] 2026-01-10 02:52:13,460 | INFO     | all data control threads have been joined
[2026-01-10 03:53:19] 2026-01-10 02:52:13,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:53:19] 2026-01-10 02:52:13,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:53:19] 2026-01-10 02:52:13,555 | INFO     | aborting loop
[2026-01-10 03:53:19] 2026-01-10 02:52:13,700 | INFO     | all job control threads have been joined
[2026-01-10 03:53:19] 2026-01-10 02:52:13,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:53:19] 2026-01-10 02:52:14,271 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,436 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,467 | INFO     | [data] control thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,473 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:53:19] 2026-01-10 02:52:14,561 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,575 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,654 | INFO     | all payload control threads have been joined
[2026-01-10 03:53:19] 2026-01-10 02:52:14,706 | INFO     | [job] control thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,720 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,835 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:14,995 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:15,126 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:15,421 | INFO     | [job] validate thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:15,516 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:15,545 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:15,660 | INFO     | [payload] control thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:17,860 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:53:19] 2026-01-10 02:52:42,449 | INFO     | PID=13501 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 03:53:19] 2026-01-10 02:52:42,449 | INFO     | .. there are 2 such processes running
[2026-01-10 03:53:19] 2026-01-10 02:52:42,450 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:53:19] 2026-01-10 02:52:42,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:53:19] 2026-01-10 02:52:42,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:53:19] 2026-01-10 02:53:07,357 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:53:19] 2026-01-10 02:53:09,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671101232960)>', '<ExcThread(monitor, started 140670413027072)>']
[2026-01-10 03:53:19] 2026-01-10 02:53:09,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:53:19] 2026-01-10 02:53:09,612 | INFO     | [monitor] control thread has ended
[2026-01-10 03:53:19] 2026-01-10 02:53:14,124 | INFO     | all workflow threads have been joined
[2026-01-10 03:53:19] 2026-01-10 02:53:14,124 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:53:19] 2026-01-10 02:53:14,124 | INFO     | traces error code: 0
[2026-01-10 03:53:19] 2026-01-10 02:53:14,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:53:19] 2026-01-10 02:53:14,608 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:53:19] 2026-01-10 02:53:14,725 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:53:19] 2026-01-10 02:53:14,835 [wrapper] pilotpid: 13501
[2026-01-10 03:53:19] 2026-01-10 02:53:14,933 [wrapper] Pilot exit status: 0
[2026-01-10 03:53:19] 2026-01-10 02:53:15,491 [wrapper] pandaids: 6963146904
[2026-01-10 03:53:19] 2026-01-10 02:53:16,446 [wrapper] cleanup supervisor_pilot   631 13502
[2026-01-10 03:53:19] 2026-01-10 02:53:16,529 [wrapper] Test setup, not cleaning
[2026-01-10 03:53:19] 2026-01-10 02:53:16,597 [wrapper] apfmon messages muted
[2026-01-10 03:53:19] 2026-01-10 02:53:16,707 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:53:19] 2026-01-10 02:53:16,810 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:53:20]  *** Error codes and diagnostics ***
[2026-01-10 03:53:20]     "exeErrorCode": 0,
[2026-01-10 03:53:20]     "exeErrorDiag": "",
[2026-01-10 03:53:20]     "pilotErrorCode": 0,
[2026-01-10 03:53:20]     "pilotErrorDiag": "",
[2026-01-10 03:53:20]  *** Listing of results directory ***
[2026-01-10 03:53:20] total 449432
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-10 03:53:20] -rwx------. 1 boinc boinc     36322 Jan  8 16:03 runpilot2-wrapper.sh
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc      5112 Jan  8 16:04 queuedata.json
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc       100 Jan  9 22:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:53:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 22:16 run_atlas
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc       105 Jan  9 22:16 job.xml
[2026-01-10 03:53:20] -rw-r--r--. 2 boinc boinc 224912059 Jan  9 22:16 EVNT.47898824._001073.pool.root.1
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc      6390 Jan  9 22:16 init_data.xml
[2026-01-10 03:53:20] -rw-r--r--. 2 boinc boinc     15847 Jan  9 22:16 start_atlas.sh
[2026-01-10 03:53:20] drwxrwx--x. 2 boinc boinc        68 Jan  9 22:16 shared
[2026-01-10 03:53:20] -rw-r--r--. 2 boinc boinc    592403 Jan  9 22:16 input.tar.gz
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc         0 Jan  9 22:16 boinc_lockfile
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc      2519 Jan  9 22:16 pandaJob.out
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc    989381 Jan  9 22:16 agis_schedconf.cvmfs.json
[2026-01-10 03:53:20] drwx------. 5 boinc boinc      4096 Jan  9 22:16 pilot3
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc 224977419 Jan 10 03:48 HITS.47898826._027207.pool.root.1
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc       531 Jan 10 03:49 boinc_task_state.xml
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc      1019 Jan 10 03:50 memory_monitor_summary.json
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc   1516240 Jan 10 03:50 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc    527824 Jan 10 03:50 log.47898826._027207.job.log.tgz.1
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc      7779 Jan 10 03:52 heartbeat.json
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc        95 Jan 10 03:52 pilot_heartbeat.json
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc      8192 Jan 10 03:52 boinc_mmap_file
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc        28 Jan 10 03:52 wrapper_checkpoint.txt
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc      4884 Jan 10 03:53 pilotlog.txt
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc   2684896 Jan 10 03:53 log.47898826._027207.job.log.1
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc       357 Jan 10 03:53 output.list
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc       620 Jan 10 03:53 runtime_log
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc   3235840 Jan 10 03:53 result.tar.gz
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc      8817 Jan 10 03:53 runtime_log.err
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc       657 Jan 10 03:53 9anNDmRj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxVfKDmLWg5kn.diag
[2026-01-10 03:53:20] -rw-r--r--. 1 boinc boinc     20739 Jan 10 03:53 stderr.txt
[2026-01-10 03:53:20] HITS file was successfully produced:
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc 224977419 Jan 10 03:48 shared/HITS.pool.root.1
[2026-01-10 03:53:20]  *** Contents of shared directory: ***
[2026-01-10 03:53:20] total 443108
[2026-01-10 03:53:20] -rw-r--r--. 2 boinc boinc 224912059 Jan  9 22:16 ATLAS.root_0
[2026-01-10 03:53:20] -rw-r--r--. 2 boinc boinc     15847 Jan  9 22:16 start_atlas.sh
[2026-01-10 03:53:20] -rw-r--r--. 2 boinc boinc    592403 Jan  9 22:16 input.tar.gz
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc 224977419 Jan 10 03:48 HITS.pool.root.1
[2026-01-10 03:53:20] -rw-------. 1 boinc boinc   3235840 Jan 10 03:53 result.tar.gz
03:53:22 (9743): run_atlas exited; CPU time 83782.576635
03:53:22 (9743): called boinc_finish(0)

</stderr_txt>
]]>

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