Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:20:59 (820778): wrapper (7.7.26015): starting
15:20:59 (820778): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 15:20:59] Arguments: --nthreads 4
[2026-01-10 15:20:59] Threads: 4
[2026-01-10 15:20:59] Checking for CVMFS
[2026-01-10 15:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 15:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 15:20:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 15:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 15:20:59] 2.9.2.0 4024750 3896 97668 154982 2 80 21602791 36864001 0 130560 0 2575103 99.989 142651 2524 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 15:20:59] CVMFS is ok
[2026-01-10 15:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 15:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 15:20:59] Further information can be found at the LHC@home message board.
[2026-01-10 15:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 15:20:59] Checking for apptainer binary...
[2026-01-10 15:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 15:20:59] Running /usr/bin/apptainer --version
[2026-01-10 15:20:59] apptainer version 1.4.1-1.1
[2026-01-10 15:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 15:20:59] belleA253c
[2026-01-10 15:20:59] apptainer works
[2026-01-10 15:20:59] Set ATHENA_PROC_NUMBER=4
[2026-01-10 15:20:59] Set ATHENA_CORE_NUMBER=4
[2026-01-10 15:20:59] Starting ATLAS job with PandaID=6962914118
[2026-01-10 15:20:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:02:42]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:02:42]  is_tar=False
[2026-01-10 17:02:42]  lfn=log.47898826._017335.job.log.tgz.1
[2026-01-10 17:02:42]  mtime=0
[2026-01-10 17:02:42]  protocol_id=None
[2026-01-10 17:02:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 17:02:42]  replicas=None
[2026-01-10 17:02:42]  scope=mc23_13p6TeV
[2026-01-10 17:02:42]  status=None
[2026-01-10 17:02:42]  status_code=0
[2026-01-10 17:02:42]  storage_token=
[2026-01-10 17:02:42]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6962914118/log.47898826._017335.job.log.tgz.1
[2026-01-10 17:02:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/82/log.47898826._017335.job.log.tgz.1
[2026-01-10 17:02:42]  workdir=None
[2026-01-10 17:02:42] ]
[2026-01-10 17:02:42] 2026-01-10 16:02:07,447 | INFO     | transferring file log.47898826._017335.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6962914118/log.47898826._017335.job.log.tgz.1 to /local/data/boinc/
[2026-01-10 17:02:42] 2026-01-10 16:02:07,447 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6962914118/log.47898826._017335.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0173
[2026-01-10 17:02:42] 2026-01-10 16:02:07,467 | INFO     | adding to output.list: log.47898826._017335.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/82/log.47898826._017335.job.log.tg
[2026-01-10 17:02:42] 2026-01-10 16:02:07,468 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 17:02:42] 2026-01-10 16:02:07,468 | INFO     | summary of transferred files:
[2026-01-10 17:02:42] 2026-01-10 16:02:07,468 | INFO     |  -- lfn=log.47898826._017335.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 17:02:42] 2026-01-10 16:02:07,468 | INFO     | stage-out finished correctly
[2026-01-10 17:02:42] 2026-01-10 16:02:07,507 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 17:02:42] 2026-01-10 16:02:07,545 | INFO     | job 6962914118 has state=finished
[2026-01-10 17:02:42] 2026-01-10 16:02:07,546 | INFO     | preparing for final server update for job 6962914118 in state='finished'
[2026-01-10 17:02:42] 2026-01-10 16:02:07,546 | INFO     | this job has now completed (state=finished)
[2026-01-10 17:02:42] 2026-01-10 16:02:07,546 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 17:02:42] 2026-01-10 16:02:07,546 | INFO     | log transfer has been attempted: DONE
[2026-01-10 17:02:42] 2026-01-10 16:02:07,546 | INFO     | job 6962914118 has finished - writing final server update
[2026-01-10 17:02:42] 2026-01-10 16:02:07,546 | INFO     | total number of processed events: 400 (read)
[2026-01-10 17:02:42] 2026-01-10 16:02:07,547 | INFO     | executing command: lscpu
[2026-01-10 17:02:42] 2026-01-10 16:02:07,565 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 17:02:42] 2026-01-10 16:02:08,241 | INFO     | PID=824564 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 17:02:42] 2026-01-10 16:02:09,242 | INFO     | time since job start (6061s) is within the limit (174528.0s)
[2026-01-10 17:02:42] 2026-01-10 16:02:10,986 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 17:02:42] 2026-01-10 16:02:10,987 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3726.0892499999995
[2026-01-10 17:02:42] 2026-01-10 16:02:10,989 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6962914118/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:02:42] 2026-01-10 16:02:10,989 | INFO     | extracted standard info from prmon json
[2026-01-10 17:02:42] 2026-01-10 16:02:10,989 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:02:42] 2026-01-10 16:02:10,989 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:02:42] 2026-01-10 16:02:10,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 17:02:42] 2026-01-10 16:02:10,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 17:02:42] 2026-01-10 16:02:10,990 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:02:42] 2026-01-10 16:02:10,990 | INFO     | sum of square deviations: 241429643.0
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | sum of deviations: -22192928500.0
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | mean x: 1768057971.5
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | mean y: 2553953.2391304346
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | intersect: 162527684081.3342
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | chi2: 0.13050305509857246
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | current memory leak: -91.92 B/s (using 92 data points, chi2=0.13)
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | could have reported an average CPU frequency of 3722 MHz (7 samples)
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | ..............................
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | . Timing measurements:
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | . get job = 0 s
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | . initial setup = 1 s
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | . payload setup = 4 s
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | . stage-in = 0 s
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | . payload execution = 6036 s
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | . stage-out = 0 s
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | . log creation = 0 s
[2026-01-10 17:02:42] 2026-01-10 16:02:10,991 | INFO     | ..............................
[2026-01-10 17:02:42] 2026-01-10 16:02:11,030 | INFO     | 
[2026-01-10 17:02:42] 2026-01-10 16:02:11,030 | INFO     | job summary report
[2026-01-10 17:02:42] 2026-01-10 16:02:11,030 | INFO     | --------------------------------------------------
[2026-01-10 17:02:42] 2026-01-10 16:02:11,030 | INFO     | PanDA job id: 6962914118
[2026-01-10 17:02:42] 2026-01-10 16:02:11,030 | INFO     | task id: 47898826
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | errors: (none)
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | pilot state: finished 
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | transexitcode: 0
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | exeerrorcode: 0
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | exeerrordiag: 
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | exitcode: 0
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | exitmsg: OK
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | cpuconsumptiontime: 23082 s
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | nevents: 400
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | neventsw: 0
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | pid: 831121
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | pgrp: 831121
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | corecount: 4
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | event service: False
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | sizes: {0: 2283971, 3: 2284233, 10: 2284261, 6044: 2311178, 6045: 2320238, 6048: 2320376}
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | --------------------------------------------------
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | 
[2026-01-10 17:02:42] 2026-01-10 16:02:11,031 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 17:02:42] 2026-01-10 16:02:11,049 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,050 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:02:42] 2026-01-10 16:02:11,051 | INFO     | job 6962914118 has completed (purged errors)
[2026-01-10 17:02:42] 2026-01-10 16:02:11,051 | INFO     | overall cleanup function is called
[2026-01-10 17:02:42] 2026-01-10 16:02:11,732 | WARNING  | process 831121 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 17:02:42] 2026-01-10 16:02:11,764 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:02:42] 2026-01-10 16:02:11,804 | INFO     | number of running child processes to parent process 831121: 1
[2026-01-10 17:02:42] 2026-01-10 16:02:11,805 | INFO     | maximum number of monitored processes: 6
[2026-01-10 17:02:42] 2026-01-10 16:02:11,805 | INFO     | aborting job monitoring since job object (job id=6962914118) has expired
[2026-01-10 17:02:42] 2026-01-10 16:02:12,057 | INFO     | --- collectZombieJob: --- 10, [831121]
[2026-01-10 17:02:42] 2026-01-10 16:02:12,058 | INFO     | zombie collector waiting for pid 831121
[2026-01-10 17:02:42] 2026-01-10 16:02:12,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:02:42] 2026-01-10 16:02:12,058 | INFO     | collected zombie processes
[2026-01-10 17:02:42] 2026-01-10 16:02:12,058 | INFO     | will attempt to kill all subprocesses of pid=831121
[2026-01-10 17:02:42] 2026-01-10 16:02:12,101 | INFO     | process IDs to be killed: [831121] (in reverse order)
[2026-01-10 17:02:42] 2026-01-10 16:02:12,135 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:02:42] 2026-01-10 16:02:12,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:02:42] 2026-01-10 16:02:12,137 | INFO     | did not find any defunct processes belonging to 831121
[2026-01-10 17:02:42] 2026-01-10 16:02:12,138 | INFO     | did not find any defunct processes belonging to 831121
[2026-01-10 17:02:42] 2026-01-10 16:02:12,138 | INFO     | ready for new job
[2026-01-10 17:02:42] 2026-01-10 16:02:12,138 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:02:42] 2026-01-10 16:02:12,139 | INFO     | ***************************************
[2026-01-10 17:02:42] 2026-01-10 16:02:12,139 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:02:42] 2026-01-10 16:02:12,139 | INFO     | ***************************************
[2026-01-10 17:02:42] 2026-01-10 16:02:12,139 | INFO     | 
[2026-01-10 17:02:42] 2026-01-10 16:02:12,140 | INFO     | architecture information:
[2026-01-10 17:02:42] 2026-01-10 16:02:12,140 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:02:42] 2026-01-10 16:02:12,154 | INFO     | cat /etc/os-release:
[2026-01-10 17:02:42] NAME="CentOS Linux"
[2026-01-10 17:02:42] VERSION="7 (Core)"
[2026-01-10 17:02:42] ID="centos"
[2026-01-10 17:02:42] ID_LIKE="rhel fedora"
[2026-01-10 17:02:42] VERSION_ID="7"
[2026-01-10 17:02:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:02:42] ANSI_COLOR="0;31"
[2026-01-10 17:02:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:02:42] HOME_URL="https://www.centos.org/"
[2026-01-10 17:02:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:02:42] 
[2026-01-10 17:02:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:02:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:02:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:02:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:02:42] 
[2026-01-10 17:02:42] 2026-01-10 16:02:12,154 | INFO     | ***************************************
[2026-01-10 17:02:42] 2026-01-10 16:02:12,657 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 17:02:42] 2026-01-10 16:02:12,675 | INFO     | sufficient remaining disk space (338669076480 B)
[2026-01-10 17:02:42] 2026-01-10 16:02:12,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:02:42] 2026-01-10 16:02:12,675 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:02:42] 2026-01-10 16:02:12,675 | INFO     | update_server=False
[2026-01-10 17:02:42] 2026-01-10 16:02:12,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:02:42] 2026-01-10 16:02:12,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:02:42] 2026-01-10 16:02:12,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:02:42] 2026-01-10 16:02:12,676 | INFO     | will abort loop
[2026-01-10 17:02:42] 2026-01-10 16:02:12,753 | INFO     | all data control threads have been joined
[2026-01-10 17:02:42] 2026-01-10 16:02:13,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:02:42] 2026-01-10 16:02:13,292 | INFO     | all payload control threads have been joined
[2026-01-10 17:02:42] 2026-01-10 16:02:13,467 | INFO     | job.realtimelogging is not enabled
[2026-01-10 17:02:42] 2026-01-10 16:02:13,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:02:42] 2026-01-10 16:02:13,681 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:13,681 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:13,681 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:13,759 | INFO     | [data] control thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:13,806 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:14,069 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:14,267 | INFO     | all job control threads have been joined
[2026-01-10 17:02:42] 2026-01-10 16:02:14,288 | INFO     | [job] validate thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:14,297 | INFO     | [payload] control thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:14,351 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:14,473 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:14,481 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:14,509 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:15,022 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:15,066 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:15,070 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:02:42] 2026-01-10 16:02:15,273 | INFO     | [job] control thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:17,560 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:02:42] 2026-01-10 16:02:17,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900509763392)>', '<ExcThread(monitor, started 139899357357824)>']
[2026-01-10 17:02:42] 2026-01-10 16:02:22,640 | INFO     | all workflow threads have been joined
[2026-01-10 17:02:42] 2026-01-10 16:02:22,641 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:02:42] 2026-01-10 16:02:22,641 | INFO     | traces error code: 0
[2026-01-10 17:02:42] 2026-01-10 16:02:22,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:02:42] 2026-01-10 16:02:42,375 | INFO     | PID=824564 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 17:02:42] 2026-01-10 16:02:42,376 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:02:42] 2026-01-10 16:02:42,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:02:42] 2026-01-10 16:02:42,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:02:42] 2026-01-10 16:02:42,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:02:42] 2026-01-10 16:02:42,376 | INFO     | [monitor] control thread has ended
[2026-01-10 17:02:42] 2026-01-10 16:02:42,452 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:02:42] 2026-01-10 16:02:42,456 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:02:42] 2026-01-10 16:02:42,460 [wrapper] pilotpid: 824564
[2026-01-10 17:02:42] 2026-01-10 16:02:42,464 [wrapper] Pilot exit status: 0
[2026-01-10 17:02:42] 2026-01-10 16:02:42,476 [wrapper] pandaids: 6962914118
[2026-01-10 17:02:42] 2026-01-10 16:02:42,499 [wrapper] cleanup supervisor_pilot  843314 824565
[2026-01-10 17:02:42] 2026-01-10 16:02:42,503 [wrapper] Test setup, not cleaning
[2026-01-10 17:02:42] 2026-01-10 16:02:42,507 [wrapper] apfmon messages muted
[2026-01-10 17:02:42] 2026-01-10 16:02:42,511 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:02:42] 2026-01-10 16:02:42,515 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:02:42]  *** Error codes and diagnostics ***
[2026-01-10 17:02:42]     "exeErrorCode": 0,
[2026-01-10 17:02:42]     "exeErrorDiag": "",
[2026-01-10 17:02:42]     "pilotErrorCode": 0,
[2026-01-10 17:02:42]     "pilotErrorDiag": "",
[2026-01-10 17:02:42]  *** Listing of results directory ***
[2026-01-10 17:02:42] total 442612
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-10 17:02:42] -rwx------ 1 boinc boinc     36322 Jan  8 09:00 runpilot2-wrapper.sh
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:01 queuedata.json
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc       100 Jan 10 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:02:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 15:20 run_atlas
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc       105 Jan 10 15:20 job.xml
[2026-01-10 17:02:42] -rw-r--r-- 2 boinc boinc 224644075 Jan 10 15:20 EVNT.47898824._000311.pool.root.1
[2026-01-10 17:02:42] -rw-r--r-- 2 boinc boinc    592395 Jan 10 15:20 input.tar.gz
[2026-01-10 17:02:42] -rw-r--r-- 2 boinc boinc     15847 Jan 10 15:20 start_atlas.sh
[2026-01-10 17:02:42] drwxrwx--x 2 boinc boinc      4096 Jan 10 15:20 shared
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc         0 Jan 10 15:20 boinc_setup_complete
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc      6379 Jan 10 15:20 init_data.xml
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc         0 Jan 10 15:20 boinc_lockfile
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc      2518 Jan 10 15:20 pandaJob.out
[2026-01-10 17:02:42] -rw------- 1 boinc boinc    989556 Jan 10 15:21 agis_schedconf.cvmfs.json
[2026-01-10 17:02:42] -rw------- 1 boinc boinc   1516240 Jan 10 15:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:02:42] drwx------ 5 boinc boinc      4096 Jan 10 15:21 pilot3
[2026-01-10 17:02:42] -rw------- 1 boinc boinc 222359534 Jan 10 17:01 HITS.47898826._017335.pool.root.1
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc       529 Jan 10 17:01 boinc_task_state.xml
[2026-01-10 17:02:42] -rw------- 1 boinc boinc      1020 Jan 10 17:02 memory_monitor_summary.json
[2026-01-10 17:02:42] -rw------- 1 boinc boinc    285404 Jan 10 17:02 log.47898826._017335.job.log.tgz.1
[2026-01-10 17:02:42] -rw------- 1 boinc boinc      7775 Jan 10 17:02 heartbeat.json
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc      8192 Jan 10 17:02 boinc_mmap_file
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc        27 Jan 10 17:02 wrapper_checkpoint.txt
[2026-01-10 17:02:42] -rw------- 1 boinc boinc       746 Jan 10 17:02 pilotlog.txt
[2026-01-10 17:02:42] -rw------- 1 boinc boinc        95 Jan 10 17:02 pilot_heartbeat.json
[2026-01-10 17:02:42] -rw------- 1 boinc boinc    877383 Jan 10 17:02 log.47898826._017335.job.log.1
[2026-01-10 17:02:42] -rw------- 1 boinc boinc       357 Jan 10 17:02 output.list
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc       620 Jan 10 17:02 runtime_log
[2026-01-10 17:02:42] -rw------- 1 boinc boinc   1177600 Jan 10 17:02 result.tar.gz
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc      8917 Jan 10 17:02 runtime_log.err
[2026-01-10 17:02:42] -rw------- 1 boinc boinc       663 Jan 10 17:02 ZFWLDm77zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdGeKDmUbsHSn.diag
[2026-01-10 17:02:42] -rw-r--r-- 1 boinc boinc     21664 Jan 10 17:02 stderr.txt
[2026-01-10 17:02:42] HITS file was successfully produced:
[2026-01-10 17:02:42] -rw------- 1 boinc boinc 222359534 Jan 10 17:01 shared/HITS.pool.root.1
[2026-01-10 17:02:42]  *** Contents of shared directory: ***
[2026-01-10 17:02:42] total 438284
[2026-01-10 17:02:42] -rw-r--r-- 2 boinc boinc 224644075 Jan 10 15:20 ATLAS.root_0
[2026-01-10 17:02:42] -rw-r--r-- 2 boinc boinc    592395 Jan 10 15:20 input.tar.gz
[2026-01-10 17:02:42] -rw-r--r-- 2 boinc boinc     15847 Jan 10 15:20 start_atlas.sh
[2026-01-10 17:02:42] -rw------- 1 boinc boinc 222359534 Jan 10 17:01 HITS.pool.root.1
[2026-01-10 17:02:42] -rw------- 1 boinc boinc   1177600 Jan 10 17:02 result.tar.gz
17:02:43 (820778): run_atlas exited; CPU time 23103.764143
17:02:43 (820778): called boinc_finish(0)

</stderr_txt>
]]>

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