Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:23:03 (3893608): wrapper (7.7.26015): starting
13:23:03 (3893608): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 13:23:03] Arguments: --nthreads 9
[2026-01-09 13:23:03] Threads: 9
[2026-01-09 13:23:03] Checking for CVMFS
[2026-01-09 13:23:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:23:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:23:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:23:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:23:04] 2.13.3.0 12448 23236 223724 154952 0 145 28069007 40960001 26534 16776704 0 88869755 99.660 80102164 37528 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:23:04] CVMFS is ok
[2026-01-09 13:23:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:23:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:23:04] Further information can be found at the LHC@home message board.
[2026-01-09 13:23:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:23:04] Checking for apptainer binary...
[2026-01-09 13:23:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:23:04] Running /usr/bin/apptainer --version
[2026-01-09 13:23:04] apptainer version 1.4.5-2.el9
[2026-01-09 13:23:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:23:04] c-212-19.aglt2.org
[2026-01-09 13:23:04] apptainer works
[2026-01-09 13:23:04] Set ATHENA_PROC_NUMBER=9
[2026-01-09 13:23:04] Set ATHENA_CORE_NUMBER=9
[2026-01-09 13:23:04] Starting ATLAS job with PandaID=6962913744
[2026-01-09 13:23:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:13:43]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:13:43] 2026-01-09 20:13:08,954 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,245 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 15:13:43] 2026-01-09 20:13:09,259 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3261.309010416667
[2026-01-09 15:13:43] 2026-01-09 20:13:09,273 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962913744/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,274 | INFO     | extracted standard info from prmon json
[2026-01-09 15:13:43] 2026-01-09 20:13:09,274 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:13:43] 2026-01-09 20:13:09,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:13:43] 2026-01-09 20:13:09,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:13:43] 2026-01-09 20:13:09,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:13:43] 2026-01-09 20:13:09,276 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:13:43] 2026-01-09 20:13:09,276 | INFO     | sum of square deviations: 390582207.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,277 | INFO     | sum of deviations: -4165867296.5
[2026-01-09 15:13:43] 2026-01-09 20:13:09,277 | INFO     | mean x: 1767986290.5
[2026-01-09 15:13:43] 2026-01-09 20:13:09,277 | INFO     | mean y: 2550340.7314814813
[2026-01-09 15:13:43] 2026-01-09 20:13:09,277 | INFO     | intersect: 18859518569.84054
[2026-01-09 15:13:43] 2026-01-09 20:13:09,277 | INFO     | chi2: 2.30611497629004
[2026-01-09 15:13:43] 2026-01-09 20:13:09,277 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,278 | INFO     | sum of deviations: 3610883226.9999995
[2026-01-09 15:13:43] 2026-01-09 20:13:09,278 | INFO     | mean x: 1767986138.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,278 | INFO     | mean y: 2572400.786407767
[2026-01-09 15:13:43] 2026-01-09 20:13:09,278 | INFO     | intersect: -18840127864.453014
[2026-01-09 15:13:43] 2026-01-09 20:13:09,278 | INFO     | chi2: 1.459530283303549
[2026-01-09 15:13:43] 2026-01-09 20:13:09,278 | INFO     | current chi2=1.459530283303549 (change=36.710428651238935 %)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,278 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 15:13:43] 2026-01-09 20:13:09,279 | INFO     | sum of deviations: 3573999668.5000033
[2026-01-09 15:13:43] 2026-01-09 20:13:09,279 | INFO     | mean x: 1767985985.5
[2026-01-09 15:13:43] 2026-01-09 20:13:09,279 | INFO     | mean y: 2572280.8469387754
[2026-01-09 15:13:43] 2026-01-09 20:13:09,279 | INFO     | intersect: -21650618255.90587
[2026-01-09 15:13:43] 2026-01-09 20:13:09,279 | INFO     | chi2: 1.462046379446575
[2026-01-09 15:13:43] 2026-01-09 20:13:09,279 | INFO     | current chi2=1.462046379446575 (change=-0.17239081448388535 %)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,279 | INFO     | right removable region: 97
[2026-01-09 15:13:43] 2026-01-09 20:13:09,279 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,280 | INFO     | sum of deviations: -18515230753.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,280 | INFO     | mean x: 1767986443.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,280 | INFO     | mean y: 2591612.145631068
[2026-01-09 15:13:43] 2026-01-09 20:13:09,280 | INFO     | intersect: 96620782141.6876
[2026-01-09 15:13:43] 2026-01-09 20:13:09,280 | INFO     | chi2: 1.0406628904473159
[2026-01-09 15:13:43] 2026-01-09 20:13:09,280 | INFO     | current chi2=1.0406628904473159 (change=54.87376383455602 %)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,280 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 15:13:43] 2026-01-09 20:13:09,281 | INFO     | sum of deviations: -15344743339.5
[2026-01-09 15:13:43] 2026-01-09 20:13:09,281 | INFO     | mean x: 1767986595.5
[2026-01-09 15:13:43] 2026-01-09 20:13:09,281 | INFO     | mean y: 2581155.3163265307
[2026-01-09 15:13:43] 2026-01-09 20:13:09,281 | INFO     | intersect: 92969228252.47523
[2026-01-09 15:13:43] 2026-01-09 20:13:09,281 | INFO     | chi2: 1.0233561485293592
[2026-01-09 15:13:43] 2026-01-09 20:13:09,281 | INFO     | current chi2=1.0233561485293592 (change=1.6630497807524953 %)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,281 | INFO     | left removable region: 20
[2026-01-09 15:13:43] 2026-01-09 20:13:09,281 | INFO     | sum of square deviations: 141539398.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,282 | INFO     | sum of deviations: 1175434559.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,282 | INFO     | mean x: 1767986565.0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,282 | INFO     | mean y: 2568205.74025974
[2026-01-09 15:13:43] 2026-01-09 20:13:09,282 | INFO     | intersect: -14679933894.125248
[2026-01-09 15:13:43] 2026-01-09 20:13:09,282 | INFO     | chi2: 0.00047835599344056866
[2026-01-09 15:13:43] 2026-01-09 20:13:09,282 | INFO     | current memory leak: 8.30 B/s (using 77 data points, chi2=0.00)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,282 | INFO     | could have reported an average CPU frequency of 3259 MHz (7 samples)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | ..............................
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | . Timing measurements:
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | . get job = 0 s
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | . initial setup = 2 s
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | . payload setup = 7 s
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | . stage-in = 0 s
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | . payload execution = 6553 s
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | . stage-out = 0 s
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | . log creation = 0 s
[2026-01-09 15:13:43] 2026-01-09 20:13:09,283 | INFO     | ..............................
[2026-01-09 15:13:43] 2026-01-09 20:13:09,370 | INFO     | time since job start (6591s) is within the limit (174528.0s)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,619 | INFO     | 
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | job summary report
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | --------------------------------------------------
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | PanDA job id: 6962913744
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | task id: 47898826
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | errors: (none)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | pilot state: finished 
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | transexitcode: 0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | exeerrorcode: 0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | exeerrordiag: 
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | exitcode: 0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | exitmsg: OK
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | cpuconsumptiontime: 42627 s
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | nevents: 400
[2026-01-09 15:13:43] 2026-01-09 20:13:09,620 | INFO     | neventsw: 0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,621 | INFO     | pid: 3912944
[2026-01-09 15:13:43] 2026-01-09 20:13:09,621 | INFO     | pgrp: 3912944
[2026-01-09 15:13:43] 2026-01-09 20:13:09,621 | INFO     | corecount: 9
[2026-01-09 15:13:43] 2026-01-09 20:13:09,621 | INFO     | event service: False
[2026-01-09 15:13:43] 2026-01-09 20:13:09,621 | INFO     | sizes: {0: 2283968, 6: 2284230, 11: 2284258, 6564: 2311341, 6565: 2311340, 6567: 2320578, 6575: 2320716}
[2026-01-09 15:13:43] 2026-01-09 20:13:09,621 | INFO     | --------------------------------------------------
[2026-01-09 15:13:43] 2026-01-09 20:13:09,621 | INFO     | 
[2026-01-09 15:13:43] 2026-01-09 20:13:09,621 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 15:13:43] 2026-01-09 20:13:09,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,641 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,641 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,641 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:13:43] 2026-01-09 20:13:09,641 | INFO     | job 6962913744 has completed (purged errors)
[2026-01-09 15:13:43] 2026-01-09 20:13:09,641 | INFO     | overall cleanup function is called
[2026-01-09 15:13:43] 2026-01-09 20:13:10,650 | INFO     | --- collectZombieJob: --- 10, [3912944]
[2026-01-09 15:13:43] 2026-01-09 20:13:10,650 | INFO     | zombie collector waiting for pid 3912944
[2026-01-09 15:13:43] 2026-01-09 20:13:10,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:13:43] 2026-01-09 20:13:10,651 | INFO     | collected zombie processes
[2026-01-09 15:13:43] 2026-01-09 20:13:10,651 | INFO     | will attempt to kill all subprocesses of pid=3912944
[2026-01-09 15:13:43] 2026-01-09 20:13:11,088 | INFO     | process IDs to be killed: [3912944] (in reverse order)
[2026-01-09 15:13:43] 2026-01-09 20:13:11,262 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:13:43] 2026-01-09 20:13:11,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:13:43] 2026-01-09 20:13:11,280 | INFO     | did not find any defunct processes belonging to 3912944
[2026-01-09 15:13:43] 2026-01-09 20:13:11,293 | INFO     | did not find any defunct processes belonging to 3912944
[2026-01-09 15:13:43] 2026-01-09 20:13:11,294 | INFO     | ready for new job
[2026-01-09 15:13:43] 2026-01-09 20:13:11,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:13:43] 2026-01-09 20:13:11,295 | INFO     | ***************************************
[2026-01-09 15:13:43] 2026-01-09 20:13:11,295 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:13:43] 2026-01-09 20:13:11,296 | INFO     | ***************************************
[2026-01-09 15:13:43] 2026-01-09 20:13:11,296 | INFO     | 
[2026-01-09 15:13:43] 2026-01-09 20:13:11,299 | INFO     | architecture information:
[2026-01-09 15:13:43] 2026-01-09 20:13:11,299 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:13:43] 2026-01-09 20:13:11,319 | INFO     | cat /etc/os-release:
[2026-01-09 15:13:43] NAME="CentOS Linux"
[2026-01-09 15:13:43] VERSION="7 (Core)"
[2026-01-09 15:13:43] ID="centos"
[2026-01-09 15:13:43] ID_LIKE="rhel fedora"
[2026-01-09 15:13:43] VERSION_ID="7"
[2026-01-09 15:13:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:13:43] ANSI_COLOR="0;31"
[2026-01-09 15:13:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:13:43] HOME_URL="https://www.centos.org/"
[2026-01-09 15:13:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:13:43] 
[2026-01-09 15:13:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:13:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:13:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:13:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:13:43] 
[2026-01-09 15:13:43] 2026-01-09 20:13:11,319 | INFO     | ***************************************
[2026-01-09 15:13:43] 2026-01-09 20:13:11,822 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 15:13:43] 2026-01-09 20:13:11,842 | INFO     | sufficient remaining disk space (126458265600 B)
[2026-01-09 15:13:43] 2026-01-09 20:13:11,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:13:43] 2026-01-09 20:13:11,842 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:13:43] 2026-01-09 20:13:11,842 | INFO     | update_server=False
[2026-01-09 15:13:43] 2026-01-09 20:13:11,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:13:43] 2026-01-09 20:13:11,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:13:43] 2026-01-09 20:13:11,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:13:43] 2026-01-09 20:13:12,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:13:43] 2026-01-09 20:13:12,476 | INFO     | aborting loop
[2026-01-09 15:13:43] 2026-01-09 20:13:12,486 | INFO     | all data control threads have been joined
[2026-01-09 15:13:43] 2026-01-09 20:13:12,850 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:12,943 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:12,946 | INFO     | all payload control threads have been joined
[2026-01-09 15:13:43] 2026-01-09 20:13:13,149 | INFO     | all job control threads have been joined
[2026-01-09 15:13:43] 2026-01-09 20:13:13,205 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,433 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,482 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,492 | INFO     | [data] control thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,526 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,549 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,712 | INFO     | [job] validate thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,793 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,904 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:13,978 | INFO     | [payload] control thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:14,159 | INFO     | [job] control thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:14,323 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:14,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:13:43] 2026-01-09 20:13:15,390 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:15,956 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:13:43] 2026-01-09 20:13:28,878 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:13:43] 2026-01-09 20:13:30,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578113898304)>', '<ExcThread(monitor, started 140577727293184)>']
[2026-01-09 15:13:43] 2026-01-09 20:13:35,464 | INFO     | all workflow threads have been joined
[2026-01-09 15:13:43] 2026-01-09 20:13:35,465 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:13:43] 2026-01-09 20:13:35,465 | INFO     | traces error code: 0
[2026-01-09 15:13:43] 2026-01-09 20:13:35,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:13:43] 2026-01-09 20:13:43,077 | INFO     | PID=3897804 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 15:13:43] 2026-01-09 20:13:43,077 | INFO     | .. there are 28 such processes running
[2026-01-09 15:13:43] 2026-01-09 20:13:43,077 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:13:43] 2026-01-09 20:13:43,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:13:43] 2026-01-09 20:13:43,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:13:43] 2026-01-09 20:13:43,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:13:43] 2026-01-09 20:13:43,078 | INFO     | [monitor] control thread has ended
[2026-01-09 15:13:43] 2026-01-09 20:13:43,210 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:13:43] 2026-01-09 20:13:43,226 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:13:43] 2026-01-09 20:13:43,229 [wrapper] pilotpid: 3897804
[2026-01-09 15:13:43] 2026-01-09 20:13:43,257 [wrapper] Pilot exit status: 0
[2026-01-09 15:13:43] 2026-01-09 20:13:43,275 [wrapper] pandaids: 6962913744
[2026-01-09 15:13:43] 2026-01-09 20:13:43,383 [wrapper] cleanup supervisor_pilot  296739 3897805
[2026-01-09 15:13:43] 2026-01-09 20:13:43,386 [wrapper] Test setup, not cleaning
[2026-01-09 15:13:43] 2026-01-09 20:13:43,390 [wrapper] apfmon messages muted
[2026-01-09 15:13:43] 2026-01-09 20:13:43,396 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:13:43] 2026-01-09 20:13:43,404 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:13:43]  *** Error codes and diagnostics ***
[2026-01-09 15:13:43]     "exeErrorCode": 0,
[2026-01-09 15:13:43]     "exeErrorDiag": "",
[2026-01-09 15:13:43]     "pilotErrorCode": 0,
[2026-01-09 15:13:43]     "pilotErrorDiag": "",
[2026-01-09 15:13:43]  *** Listing of results directory ***
[2026-01-09 15:13:43] total 439604
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 02:59 queuedata.json
[2026-01-09 15:13:43] -rwx------. 1 boincer umatlas     36322 Jan  8 03:00 runpilot2-wrapper.sh
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:13:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:23 run_atlas
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:23 job.xml
[2026-01-09 15:13:43] -rw-r--r--. 2 boincer umatlas 224920903 Jan  9 13:23 EVNT.47898824._000301.pool.root.1
[2026-01-09 15:13:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:23 start_atlas.sh
[2026-01-09 15:13:43] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:23 shared
[2026-01-09 15:13:43] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 13:23 input.tar.gz
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:23 boinc_lockfile
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 13:23 pandaJob.out
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas        57 Jan  9 13:23 setup.sh.local
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas    989372 Jan  9 13:23 agis_schedconf.cvmfs.json
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas   1516240 Jan  9 13:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:13:43] drwx------. 5 boincer umatlas      4096 Jan  9 13:23 pilot3
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas      6957 Jan  9 15:09 init_data.xml
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas 218697893 Jan  9 15:12 HITS.47898826._017084.pool.root.1
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas       530 Jan  9 15:12 boinc_task_state.xml
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas        95 Jan  9 15:12 pilot_heartbeat.json
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas      1045 Jan  9 15:12 memory_monitor_summary.json
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas    368187 Jan  9 15:13 log.47898826._017084.job.log.tgz.1
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas      7770 Jan  9 15:13 heartbeat.json
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas        27 Jan  9 15:13 wrapper_checkpoint.txt
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 15:13 boinc_mmap_file
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas       823 Jan  9 15:13 pilotlog.txt
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas    941259 Jan  9 15:13 log.47898826._017084.job.log.1
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas       357 Jan  9 15:13 output.list
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas       620 Jan  9 15:13 runtime_log
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas   1331200 Jan  9 15:13 result.tar.gz
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 15:13 runtime_log.err
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas       652 Jan  9 15:13 6ubNDmv7zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPLjKDmzT8uOn.diag
[2026-01-09 15:13:43] -rw-r--r--. 1 boincer umatlas     21090 Jan  9 15:13 stderr.txt
[2026-01-09 15:13:43] HITS file was successfully produced:
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas 218697893 Jan  9 15:12 shared/HITS.pool.root.1
[2026-01-09 15:13:43]  *** Contents of shared directory: ***
[2026-01-09 15:13:43] total 435132
[2026-01-09 15:13:43] -rw-r--r--. 2 boincer umatlas 224920903 Jan  9 13:23 ATLAS.root_0
[2026-01-09 15:13:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:23 start_atlas.sh
[2026-01-09 15:13:43] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 13:23 input.tar.gz
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas 218697893 Jan  9 15:12 HITS.pool.root.1
[2026-01-09 15:13:43] -rw-------. 1 boincer umatlas   1331200 Jan  9 15:13 result.tar.gz
15:13:45 (3893608): run_atlas exited; CPU time 42854.860087
15:13:45 (3893608): called boinc_finish(0)

</stderr_txt>
]]>

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