Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:05 (16572): wrapper (7.7.26015): starting
15:33:05 (16572): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 15:33:05] Arguments: --nthreads 8
[2026-01-10 15:33:05] Threads: 8
[2026-01-10 15:33:05] Checking for CVMFS
[2026-01-10 15:33:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 15:33:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 15:33:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 15:33:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 15:33:08] 2.11.2.0 9669 36981 98140 154982 3 86 18500894 25165825 899 130560 0 15397740 99.840 9060658 3767 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 15:33:08] CVMFS is ok
[2026-01-10 15:33:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 15:33:08] Checking for apptainer binary...
[2026-01-10 15:33:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 15:33:08] Running /usr/bin/apptainer --version
[2026-01-10 15:33:08] apptainer version 1.3.2-1.el7
[2026-01-10 15:33:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 15:33:34] cg-vwn394.simple-grid.lan
[2026-01-10 15:33:34] apptainer works
[2026-01-10 15:33:34] Set ATHENA_PROC_NUMBER=8
[2026-01-10 15:33:34] Set ATHENA_CORE_NUMBER=8
[2026-01-10 15:33:34] Starting ATLAS job with PandaID=6962322700
[2026-01-10 15:33:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:40:57]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:40:57] 2026-01-10 20:39:52,830 | INFO     | time since job start (21704s) is within the limit (174528.0s)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,127 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 21:40:57] 2026-01-10 20:39:53,128 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 21:40:57] 2026-01-10 20:39:53,130 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6962322700/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,131 | INFO     | extracted standard info from prmon json
[2026-01-10 21:40:57] 2026-01-10 20:39:53,131 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:40:57] 2026-01-10 20:39:53,131 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:40:57] 2026-01-10 20:39:53,131 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 21:40:57] 2026-01-10 20:39:53,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 21:40:57] 2026-01-10 20:39:53,147 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:40:57] 2026-01-10 20:39:53,148 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,152 | INFO     | sum of deviations: 204706045837.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,152 | INFO     | mean x: 1768066925.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,152 | INFO     | mean y: 2435660.9507246376
[2026-01-10 21:40:57] 2026-01-10 20:39:53,152 | INFO     | intersect: -28422357224.89371
[2026-01-10 21:40:57] 2026-01-10 20:39:53,153 | INFO     | chi2: 8.202615510847037
[2026-01-10 21:40:57] 2026-01-10 20:39:53,153 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,157 | INFO     | sum of deviations: 224422193929.49994
[2026-01-10 21:40:57] 2026-01-10 20:39:53,158 | INFO     | mean x: 1768066772.5
[2026-01-10 21:40:57] 2026-01-10 20:39:53,158 | INFO     | mean y: 2441096.379411765
[2026-01-10 21:40:57] 2026-01-10 20:39:53,158 | INFO     | intersect: -32555208739.908752
[2026-01-10 21:40:57] 2026-01-10 20:39:53,158 | INFO     | chi2: 7.477431966981585
[2026-01-10 21:40:57] 2026-01-10 20:39:53,159 | INFO     | current chi2=7.477431966981585 (change=8.840881824906688 %)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,159 | INFO     | right removable region: 339
[2026-01-10 21:40:57] 2026-01-10 20:39:53,159 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,172 | INFO     | sum of deviations: 84488845256.99998
[2026-01-10 21:40:57] 2026-01-10 20:39:53,173 | INFO     | mean x: 1768067077.5
[2026-01-10 21:40:57] 2026-01-10 20:39:53,173 | INFO     | mean y: 2469245.4
[2026-01-10 21:40:57] 2026-01-10 20:39:53,173 | INFO     | intersect: -12254601525.117725
[2026-01-10 21:40:57] 2026-01-10 20:39:53,174 | INFO     | chi2: 3.3670560847820323
[2026-01-10 21:40:57] 2026-01-10 20:39:53,174 | INFO     | current chi2=3.3670560847820323 (change=58.95143347473159 %)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,174 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,178 | INFO     | sum of deviations: -3636099162.9999924
[2026-01-10 21:40:57] 2026-01-10 20:39:53,179 | INFO     | mean x: 1768067230.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,179 | INFO     | mean y: 2494583.904477612
[2026-01-10 21:40:57] 2026-01-10 20:39:53,179 | INFO     | intersect: 553969188.9717184
[2026-01-10 21:40:57] 2026-01-10 20:39:53,179 | INFO     | chi2: 0.9054843889725828
[2026-01-10 21:40:57] 2026-01-10 20:39:53,180 | INFO     | current chi2=0.9054843889725828 (change=73.1075347076911 %)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,180 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 21:40:57] 2026-01-10 20:39:53,184 | INFO     | sum of deviations: -15882008068.000008
[2026-01-10 21:40:57] 2026-01-10 20:39:53,184 | INFO     | mean x: 1768067382.5
[2026-01-10 21:40:57] 2026-01-10 20:39:53,184 | INFO     | mean y: 2498194.8545454545
[2026-01-10 21:40:57] 2026-01-10 20:39:53,184 | INFO     | intersect: 2522425248.194774
[2026-01-10 21:40:57] 2026-01-10 20:39:53,185 | INFO     | chi2: 0.8360262370504035
[2026-01-10 21:40:57] 2026-01-10 20:39:53,185 | INFO     | current chi2=0.8360262370504035 (change=7.670828207319036 %)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,185 | INFO     | left removable region: 30
[2026-01-10 21:40:57] 2026-01-10 20:39:53,186 | INFO     | sum of square deviations: 9148487810.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,189 | INFO     | sum of deviations: 13379649414.999994
[2026-01-10 21:40:57] 2026-01-10 20:39:53,189 | INFO     | mean x: 1768067657.0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,189 | INFO     | mean y: 2502541.8090614886
[2026-01-10 21:40:57] 2026-01-10 20:39:53,189 | INFO     | intersect: -2583293699.489145
[2026-01-10 21:40:57] 2026-01-10 20:39:53,190 | INFO     | chi2: 0.001930171746680209
[2026-01-10 21:40:57] 2026-01-10 20:39:53,190 | INFO     | current memory leak: 1.46 B/s (using 309 data points, chi2=0.00)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,191 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,191 | INFO     | ..............................
[2026-01-10 21:40:57] 2026-01-10 20:39:53,191 | INFO     | . Timing measurements:
[2026-01-10 21:40:57] 2026-01-10 20:39:53,191 | INFO     | . get job = 0 s
[2026-01-10 21:40:57] 2026-01-10 20:39:53,192 | INFO     | . initial setup = 14 s
[2026-01-10 21:40:57] 2026-01-10 20:39:53,192 | INFO     | . payload setup = 143 s
[2026-01-10 21:40:57] 2026-01-10 20:39:53,192 | INFO     | . stage-in = 0 s
[2026-01-10 21:40:57] 2026-01-10 20:39:53,192 | INFO     | . payload execution = 21206 s
[2026-01-10 21:40:57] 2026-01-10 20:39:53,192 | INFO     | . stage-out = 4 s
[2026-01-10 21:40:57] 2026-01-10 20:39:53,192 | INFO     | . log creation = 1 s
[2026-01-10 21:40:57] 2026-01-10 20:39:53,192 | INFO     | ..............................
[2026-01-10 21:40:57] 2026-01-10 20:39:53,314 | INFO     | 
[2026-01-10 21:40:57] 2026-01-10 20:39:53,314 | INFO     | job summary report
[2026-01-10 21:40:57] 2026-01-10 20:39:53,314 | INFO     | --------------------------------------------------
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | PanDA job id: 6962322700
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | task id: 47898826
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | errors: (none)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | pilot state: finished 
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | transexitcode: 0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | exeerrorcode: 0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | exeerrordiag: 
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | exitcode: 0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,315 | INFO     | exitmsg: OK
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | cpuconsumptiontime: 79590 s
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | nevents: 400
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | neventsw: 0
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | pid: 26747
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | pgrp: 26747
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | corecount: 8
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | event service: False
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 33: 2284054, 44: 2284110, 55: 2284266, 66: 2284294, 76: 2284322, 87: 2284378, 98: 2284406, 109: 2284714, 
[2026-01-10 21:40:57] 2026-01-10 20:39:53,316 | INFO     | --------------------------------------------------
[2026-01-10 21:40:57] 2026-01-10 20:39:53,317 | INFO     | 
[2026-01-10 21:40:57] 2026-01-10 20:39:53,317 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-10 21:40:57] 2026-01-10 20:39:53,898 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,898 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,898 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,898 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,900 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,900 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:40:57] 2026-01-10 20:39:53,900 | INFO     | job 6962322700 has completed (purged errors)
[2026-01-10 21:40:57] 2026-01-10 20:39:53,900 | INFO     | overall cleanup function is called
[2026-01-10 21:40:57] 2026-01-10 20:39:54,909 | INFO     | --- collectZombieJob: --- 10, [26747]
[2026-01-10 21:40:57] 2026-01-10 20:39:54,909 | INFO     | zombie collector waiting for pid 26747
[2026-01-10 21:40:57] 2026-01-10 20:39:54,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:40:57] 2026-01-10 20:39:54,910 | INFO     | collected zombie processes
[2026-01-10 21:40:57] 2026-01-10 20:39:54,910 | INFO     | will attempt to kill all subprocesses of pid=26747
[2026-01-10 21:40:57] 2026-01-10 20:39:55,016 | INFO     | process IDs to be killed: [26747] (in reverse order)
[2026-01-10 21:40:57] 2026-01-10 20:39:55,689 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:40:57] 2026-01-10 20:39:55,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:40:57] 2026-01-10 20:39:55,691 | INFO     | did not find any defunct processes belonging to 26747
[2026-01-10 21:40:57] 2026-01-10 20:39:55,693 | INFO     | did not find any defunct processes belonging to 26747
[2026-01-10 21:40:57] 2026-01-10 20:39:55,693 | INFO     | ready for new job
[2026-01-10 21:40:57] 2026-01-10 20:39:55,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:40:57] 2026-01-10 20:39:55,696 | INFO     | ***************************************
[2026-01-10 21:40:57] 2026-01-10 20:39:55,696 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:40:57] 2026-01-10 20:39:55,696 | INFO     | ***************************************
[2026-01-10 21:40:57] 2026-01-10 20:39:55,696 | INFO     | 
[2026-01-10 21:40:57] 2026-01-10 20:39:55,697 | INFO     | pilot is running in a VM
[2026-01-10 21:40:57] 2026-01-10 20:39:55,697 | INFO     | architecture information:
[2026-01-10 21:40:57] 2026-01-10 20:39:55,705 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:40:57] 2026-01-10 20:39:56,003 | INFO     | cat /etc/os-release:
[2026-01-10 21:40:57] NAME="CentOS Linux"
[2026-01-10 21:40:57] VERSION="7 (Core)"
[2026-01-10 21:40:57] ID="centos"
[2026-01-10 21:40:57] ID_LIKE="rhel fedora"
[2026-01-10 21:40:57] VERSION_ID="7"
[2026-01-10 21:40:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:40:57] ANSI_COLOR="0;31"
[2026-01-10 21:40:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:40:57] HOME_URL="https://www.centos.org/"
[2026-01-10 21:40:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:40:57] 
[2026-01-10 21:40:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:40:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:40:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:40:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:40:57] 
[2026-01-10 21:40:57] 2026-01-10 20:39:56,003 | INFO     | ***************************************
[2026-01-10 21:40:57] 2026-01-10 20:39:56,506 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-10 21:40:57] 2026-01-10 20:39:56,743 | INFO     | sufficient remaining disk space (497131978752 B)
[2026-01-10 21:40:57] 2026-01-10 20:39:56,743 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:40:57] 2026-01-10 20:39:56,744 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:40:57] 2026-01-10 20:39:56,744 | INFO     | update_server=False
[2026-01-10 21:40:57] 2026-01-10 20:39:56,744 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:40:57] 2026-01-10 20:39:56,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:40:57] 2026-01-10 20:39:56,746 | INFO     | aborting loop
[2026-01-10 21:40:57] 2026-01-10 20:39:57,750 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:57,751 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:57,827 | INFO     | all data control threads have been joined
[2026-01-10 21:40:57] 2026-01-10 20:39:57,874 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:57,891 | INFO     | all payload control threads have been joined
[2026-01-10 21:40:57] 2026-01-10 20:39:57,900 | INFO     | all job control threads have been joined
[2026-01-10 21:40:57] 2026-01-10 20:39:58,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:40:57] 2026-01-10 20:39:58,065 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:58,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:40:57] 2026-01-10 20:39:58,339 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:58,356 | INFO     | [job] validate thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:58,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:40:57] 2026-01-10 20:39:58,809 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:58,833 | INFO     | [data] control thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:58,897 | INFO     | [payload] control thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:58,906 | INFO     | [job] control thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:58,930 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:59,034 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:59,147 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:39:59,335 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:40:00,024 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:40:02,647 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:40:57] 2026-01-10 20:40:25,962 | INFO     | PID=20292 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 21:40:57] 2026-01-10 20:40:25,963 | INFO     | .. there are 2 such processes running
[2026-01-10 21:40:57] 2026-01-10 20:40:25,963 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:40:57] 2026-01-10 20:40:25,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:40:57] 2026-01-10 20:40:25,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:40:57] 2026-01-10 20:40:45,618 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:40:57] 2026-01-10 20:40:46,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380476647232)>', '<ExcThread(monitor, started 140380024579840)>']
[2026-01-10 21:40:57] 2026-01-10 20:40:47,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:40:57] 2026-01-10 20:40:47,089 | INFO     | [monitor] control thread has ended
[2026-01-10 21:40:57] 2026-01-10 20:40:51,633 | INFO     | all workflow threads have been joined
[2026-01-10 21:40:57] 2026-01-10 20:40:51,633 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:40:57] 2026-01-10 20:40:51,634 | INFO     | traces error code: 0
[2026-01-10 21:40:57] 2026-01-10 20:40:51,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:40:57] 2026-01-10 20:40:52,016 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:40:57] 2026-01-10 20:40:52,129 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:40:57] 2026-01-10 20:40:52,223 [wrapper] pilotpid: 20292
[2026-01-10 21:40:57] 2026-01-10 20:40:52,323 [wrapper] Pilot exit status: 0
[2026-01-10 21:40:57] 2026-01-10 20:40:52,733 [wrapper] pandaids: 6962322700
[2026-01-10 21:40:57] 2026-01-10 20:40:54,056 [wrapper] cleanup supervisor_pilot 25966 20293
[2026-01-10 21:40:57] 2026-01-10 20:40:54,110 [wrapper] Test setup, not cleaning
[2026-01-10 21:40:57] 2026-01-10 20:40:54,196 [wrapper] apfmon messages muted
[2026-01-10 21:40:57] 2026-01-10 20:40:54,292 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:40:57] 2026-01-10 20:40:54,382 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:40:57]  *** Error codes and diagnostics ***
[2026-01-10 21:40:57]     "exeErrorCode": 0,
[2026-01-10 21:40:57]     "exeErrorDiag": "",
[2026-01-10 21:40:57]     "pilotErrorCode": 0,
[2026-01-10 21:40:57]     "pilotErrorDiag": "",
[2026-01-10 21:40:57]  *** Listing of results directory ***
[2026-01-10 21:40:57] total 445764
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-10 21:40:57] -rwx------. 1 boinc boinc     36322 Jan  7 22:07 runpilot2-wrapper.sh
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc       100 Jan 10 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:40:57] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 15:33 run_atlas
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc       105 Jan 10 15:33 job.xml
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc      6390 Jan 10 15:33 init_data.xml
[2026-01-10 21:40:57] -rw-r--r--. 2 boinc boinc 223876623 Jan 10 15:33 EVNT.47898824._000725.pool.root.1
[2026-01-10 21:40:57] -rw-r--r--. 2 boinc boinc     15847 Jan 10 15:33 start_atlas.sh
[2026-01-10 21:40:57] drwxrwx--x. 2 boinc boinc        68 Jan 10 15:33 shared
[2026-01-10 21:40:57] -rw-r--r--. 2 boinc boinc    592404 Jan 10 15:33 input.tar.gz
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc         0 Jan 10 15:33 boinc_lockfile
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc      2519 Jan 10 15:33 pandaJob.out
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc    989556 Jan 10 15:37 agis_schedconf.cvmfs.json
[2026-01-10 21:40:57] drwx------. 5 boinc boinc      4096 Jan 10 15:38 pilot3
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc 221744543 Jan 10 21:36 HITS.47898826._015535.pool.root.1
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc       531 Jan 10 21:36 boinc_task_state.xml
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc      1013 Jan 10 21:37 memory_monitor_summary.json
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc   1516240 Jan 10 21:37 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc    565059 Jan 10 21:37 log.47898826._015535.job.log.tgz.1
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc      7779 Jan 10 21:39 heartbeat.json
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc        95 Jan 10 21:40 pilot_heartbeat.json
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc      8192 Jan 10 21:40 boinc_mmap_file
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc        28 Jan 10 21:40 wrapper_checkpoint.txt
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc      4885 Jan 10 21:40 pilotlog.txt
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc   2903910 Jan 10 21:40 log.47898826._015535.job.log.1
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc       357 Jan 10 21:40 output.list
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc       620 Jan 10 21:40 runtime_log
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc   3491840 Jan 10 21:40 result.tar.gz
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc      8833 Jan 10 21:40 runtime_log.err
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc       657 Jan 10 21:40 8xcMDmJvpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTydKDmDEWyin.diag
[2026-01-10 21:40:57] -rw-r--r--. 1 boinc boinc     20778 Jan 10 21:40 stderr.txt
[2026-01-10 21:40:57] HITS file was successfully produced:
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc 221744543 Jan 10 21:36 shared/HITS.pool.root.1
[2026-01-10 21:40:57]  *** Contents of shared directory: ***
[2026-01-10 21:40:57] total 439188
[2026-01-10 21:40:57] -rw-r--r--. 2 boinc boinc 223876623 Jan 10 15:33 ATLAS.root_0
[2026-01-10 21:40:57] -rw-r--r--. 2 boinc boinc     15847 Jan 10 15:33 start_atlas.sh
[2026-01-10 21:40:57] -rw-r--r--. 2 boinc boinc    592404 Jan 10 15:33 input.tar.gz
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc 221744543 Jan 10 21:36 HITS.pool.root.1
[2026-01-10 21:40:57] -rw-------. 1 boinc boinc   3491840 Jan 10 21:40 result.tar.gz
21:40:58 (16572): run_atlas exited; CPU time 79799.492607
21:40:58 (16572): called boinc_finish(0)

</stderr_txt>
]]>

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