Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:00:26 (15635): wrapper (7.7.26015): starting
13:00:26 (15635): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:00:26] Arguments: --nthreads 8
[2026-01-09 13:00:26] Threads: 8
[2026-01-09 13:00:26] Checking for CVMFS
[2026-01-09 13:00:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:00:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:00:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:00:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:00:27] 2.11.2.0 2466 181362 139348 154951 3 59 11852107 18432000 1833 130560 0 119256201 99.979 7141878 30205 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:00:27] CVMFS is ok
[2026-01-09 13:00:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:00:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:00:27] Further information can be found at the LHC@home message board.
[2026-01-09 13:00:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:00:27] Checking for apptainer binary...
[2026-01-09 13:00:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:00:27] Running /usr/bin/apptainer --version
[2026-01-09 13:00:27] apptainer version 1.3.2-1.el7
[2026-01-09 13:00:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:00:27] c-206-20.aglt2.org
[2026-01-09 13:00:27] apptainer works
[2026-01-09 13:00:27] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:00:27] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:00:27] Starting ATLAS job with PandaID=6962017160
[2026-01-09 13:00:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:02:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:02:21] 2026-01-09 22:01:43,739 | WARNING  | process 25740 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 17:02:21] 2026-01-09 22:01:43,739 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962017160/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:02:21] 2026-01-09 22:01:43,891 | INFO     | number of running child processes to parent process 25740: 1
[2026-01-09 17:02:21] 2026-01-09 22:01:43,891 | INFO     | maximum number of monitored processes: 6
[2026-01-09 17:02:21] 2026-01-09 22:01:45,654 | INFO     | time since job start (14467s) is within the limit (174528.0s)
[2026-01-09 17:02:21] 2026-01-09 22:01:46,394 | INFO     | monitor loop #1051: job 0:6962017160 is in state 'finished'
[2026-01-09 17:02:21] 2026-01-09 22:01:46,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,390 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 17:02:21] 2026-01-09 22:01:47,393 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2500.0833333333335
[2026-01-09 17:02:21] 2026-01-09 22:01:47,396 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962017160/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,396 | INFO     | extracted standard info from prmon json
[2026-01-09 17:02:21] 2026-01-09 22:01:47,397 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:02:21] 2026-01-09 22:01:47,397 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:02:21] 2026-01-09 22:01:47,397 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:02:21] 2026-01-09 22:01:47,397 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:02:21] 2026-01-09 22:01:47,401 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:02:21] 2026-01-09 22:01:47,401 | INFO     | sum of square deviations: 4127772278.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,404 | INFO     | sum of deviations: 33158989085.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,404 | INFO     | mean x: 1767988862.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,404 | INFO     | mean y: 2476637.7679324895
[2026-01-09 17:02:21] 2026-01-09 22:01:47,404 | INFO     | intersect: -14200032471.059309
[2026-01-09 17:02:21] 2026-01-09 22:01:47,405 | INFO     | chi2: 1.3702921322221837
[2026-01-09 17:02:21] 2026-01-09 22:01:47,405 | INFO     | sum of square deviations: 3871990738.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,408 | INFO     | sum of deviations: 32288691074.5
[2026-01-09 17:02:21] 2026-01-09 22:01:47,408 | INFO     | mean x: 1767988709.5
[2026-01-09 17:02:21] 2026-01-09 22:01:47,408 | INFO     | mean y: 2476118.8232758623
[2026-01-09 17:02:21] 2026-01-09 22:01:47,408 | INFO     | intersect: -14740854928.950893
[2026-01-09 17:02:21] 2026-01-09 22:01:47,409 | INFO     | chi2: 1.3708846552816059
[2026-01-09 17:02:21] 2026-01-09 22:01:47,409 | INFO     | current chi2=1.3708846552816059 (change=-0.043240637925962465 %)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,409 | INFO     | right removable region: 231
[2026-01-09 17:02:21] 2026-01-09 22:01:47,410 | INFO     | sum of square deviations: 3871990738.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,412 | INFO     | sum of deviations: 328609806.00000006
[2026-01-09 17:02:21] 2026-01-09 22:01:47,412 | INFO     | mean x: 1767989014.5
[2026-01-09 17:02:21] 2026-01-09 22:01:47,413 | INFO     | mean y: 2496007.172413793
[2026-01-09 17:02:21] 2026-01-09 22:01:47,413 | INFO     | intersect: -147550458.94208658
[2026-01-09 17:02:21] 2026-01-09 22:01:47,413 | INFO     | chi2: 0.06111867251777234
[2026-01-09 17:02:21] 2026-01-09 22:01:47,413 | INFO     | current chi2=0.06111867251777234 (change=95.53973411358226 %)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,414 | INFO     | sum of square deviations: 3627000098.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,416 | INFO     | sum of deviations: 634638082.999999
[2026-01-09 17:02:21] 2026-01-09 22:01:47,416 | INFO     | mean x: 1767989167.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,416 | INFO     | mean y: 2495787.6431718064
[2026-01-09 17:02:21] 2026-01-09 22:01:47,417 | INFO     | intersect: -306859940.33939886
[2026-01-09 17:02:21] 2026-01-09 22:01:47,417 | INFO     | chi2: 0.049478275823394445
[2026-01-09 17:02:21] 2026-01-09 22:01:47,417 | INFO     | current chi2=0.049478275823394445 (change=19.045565315563834 %)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,418 | INFO     | left removable region: 20
[2026-01-09 17:02:21] 2026-01-09 22:01:47,418 | INFO     | sum of square deviations: 2912836010.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,420 | INFO     | sum of deviations: 6915742569.000001
[2026-01-09 17:02:21] 2026-01-09 22:01:47,420 | INFO     | mean x: 1767989289.0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,420 | INFO     | mean y: 2491229.1279620854
[2026-01-09 17:02:21] 2026-01-09 22:01:47,421 | INFO     | intersect: -4195121937.386463
[2026-01-09 17:02:21] 2026-01-09 22:01:47,421 | INFO     | chi2: 0.0014453046138370891
[2026-01-09 17:02:21] 2026-01-09 22:01:47,421 | INFO     | current memory leak: 2.37 B/s (using 211 data points, chi2=0.00)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,422 | INFO     | could have reported an average CPU frequency of 2530 MHz (11 samples)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,422 | INFO     | ..............................
[2026-01-09 17:02:21] 2026-01-09 22:01:47,422 | INFO     | . Timing measurements:
[2026-01-09 17:02:21] 2026-01-09 22:01:47,423 | INFO     | . get job = 0 s
[2026-01-09 17:02:21] 2026-01-09 22:01:47,423 | INFO     | . initial setup = 2 s
[2026-01-09 17:02:21] 2026-01-09 22:01:47,423 | INFO     | . payload setup = 4 s
[2026-01-09 17:02:21] 2026-01-09 22:01:47,423 | INFO     | . stage-in = 0 s
[2026-01-09 17:02:21] 2026-01-09 22:01:47,423 | INFO     | . payload execution = 14434 s
[2026-01-09 17:02:21] 2026-01-09 22:01:47,423 | INFO     | . stage-out = 2 s
[2026-01-09 17:02:21] 2026-01-09 22:01:47,424 | INFO     | . log creation = 0 s
[2026-01-09 17:02:21] 2026-01-09 22:01:47,424 | INFO     | ..............................
[2026-01-09 17:02:21] 2026-01-09 22:01:47,659 | INFO     | time since job start (14469s) is within the limit (174528.0s)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,935 | INFO     | 
[2026-01-09 17:02:21] 2026-01-09 22:01:47,935 | INFO     | job summary report
[2026-01-09 17:02:21] 2026-01-09 22:01:47,935 | INFO     | --------------------------------------------------
[2026-01-09 17:02:21] 2026-01-09 22:01:47,935 | INFO     | PanDA job id: 6962017160
[2026-01-09 17:02:21] 2026-01-09 22:01:47,936 | INFO     | task id: 47898826
[2026-01-09 17:02:21] 2026-01-09 22:01:47,936 | INFO     | errors: (none)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,936 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:02:21] 2026-01-09 22:01:47,936 | INFO     | pilot state: finished 
[2026-01-09 17:02:21] 2026-01-09 22:01:47,936 | INFO     | transexitcode: 0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,936 | INFO     | exeerrorcode: 0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,937 | INFO     | exeerrordiag: 
[2026-01-09 17:02:21] 2026-01-09 22:01:47,937 | INFO     | exitcode: 0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,937 | INFO     | exitmsg: OK
[2026-01-09 17:02:21] 2026-01-09 22:01:47,937 | INFO     | cpuconsumptiontime: 110030 s
[2026-01-09 17:02:21] 2026-01-09 22:01:47,937 | INFO     | nevents: 400
[2026-01-09 17:02:21] 2026-01-09 22:01:47,937 | INFO     | neventsw: 0
[2026-01-09 17:02:21] 2026-01-09 22:01:47,938 | INFO     | pid: 25740
[2026-01-09 17:02:21] 2026-01-09 22:01:47,938 | INFO     | pgrp: 25740
[2026-01-09 17:02:21] 2026-01-09 22:01:47,938 | INFO     | corecount: 8
[2026-01-09 17:02:21] 2026-01-09 22:01:47,938 | INFO     | event service: False
[2026-01-09 17:02:21] 2026-01-09 22:01:47,938 | INFO     | sizes: {0: 2283737, 1: 2283992, 2: 2283992, 4: 2284282, 12: 2284310, 14442: 2315172, 14445: 2324170, 14448: 2324226, 14453: 2324420}
[2026-01-09 17:02:21] 2026-01-09 22:01:47,938 | INFO     | --------------------------------------------------
[2026-01-09 17:02:21] 2026-01-09 22:01:47,939 | INFO     | 
[2026-01-09 17:02:21] 2026-01-09 22:01:47,939 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 17:02:21] 2026-01-09 22:01:47,955 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,955 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,955 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,956 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,958 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,959 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:02:21] 2026-01-09 22:01:47,959 | INFO     | job 6962017160 has completed (purged errors)
[2026-01-09 17:02:21] 2026-01-09 22:01:47,959 | INFO     | overall cleanup function is called
[2026-01-09 17:02:21] 2026-01-09 22:01:48,967 | INFO     | --- collectZombieJob: --- 10, [25740]
[2026-01-09 17:02:21] 2026-01-09 22:01:48,967 | INFO     | zombie collector waiting for pid 25740
[2026-01-09 17:02:21] 2026-01-09 22:01:48,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:02:21] 2026-01-09 22:01:48,967 | INFO     | collected zombie processes
[2026-01-09 17:02:21] 2026-01-09 22:01:48,967 | INFO     | will attempt to kill all subprocesses of pid=25740
[2026-01-09 17:02:21] 2026-01-09 22:01:49,080 | INFO     | process IDs to be killed: [25740] (in reverse order)
[2026-01-09 17:02:21] 2026-01-09 22:01:49,142 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:02:21] 2026-01-09 22:01:49,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:02:21] 2026-01-09 22:01:49,148 | INFO     | did not find any defunct processes belonging to 25740
[2026-01-09 17:02:21] 2026-01-09 22:01:49,153 | INFO     | did not find any defunct processes belonging to 25740
[2026-01-09 17:02:21] 2026-01-09 22:01:49,153 | INFO     | ready for new job
[2026-01-09 17:02:21] 2026-01-09 22:01:49,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:02:21] 2026-01-09 22:01:49,156 | INFO     | ***************************************
[2026-01-09 17:02:21] 2026-01-09 22:01:49,156 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:02:21] 2026-01-09 22:01:49,156 | INFO     | ***************************************
[2026-01-09 17:02:21] 2026-01-09 22:01:49,156 | INFO     | 
[2026-01-09 17:02:21] 2026-01-09 22:01:49,157 | INFO     | architecture information:
[2026-01-09 17:02:21] 2026-01-09 22:01:49,162 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:02:21] 2026-01-09 22:01:49,174 | INFO     | cat /etc/os-release:
[2026-01-09 17:02:21] NAME="CentOS Linux"
[2026-01-09 17:02:21] VERSION="7 (Core)"
[2026-01-09 17:02:21] ID="centos"
[2026-01-09 17:02:21] ID_LIKE="rhel fedora"
[2026-01-09 17:02:21] VERSION_ID="7"
[2026-01-09 17:02:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:02:21] ANSI_COLOR="0;31"
[2026-01-09 17:02:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:02:21] HOME_URL="https://www.centos.org/"
[2026-01-09 17:02:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:02:21] 
[2026-01-09 17:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:02:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:02:21] 
[2026-01-09 17:02:21] 2026-01-09 22:01:49,175 | INFO     | ***************************************
[2026-01-09 17:02:21] 2026-01-09 22:01:49,678 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 17:02:21] 2026-01-09 22:01:49,697 | INFO     | sufficient remaining disk space (27949793280 B)
[2026-01-09 17:02:21] 2026-01-09 22:01:49,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:02:21] 2026-01-09 22:01:49,697 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:02:21] 2026-01-09 22:01:49,697 | INFO     | update_server=False
[2026-01-09 17:02:21] 2026-01-09 22:01:49,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:02:21] 2026-01-09 22:01:49,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:02:21] 2026-01-09 22:01:49,908 | INFO     | aborting loop
[2026-01-09 17:02:21] 2026-01-09 22:01:49,984 | INFO     | all job control threads have been joined
[2026-01-09 17:02:21] 2026-01-09 22:01:50,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:02:21] 2026-01-09 22:01:50,382 | INFO     | all payload control threads have been joined
[2026-01-09 17:02:21] 2026-01-09 22:01:50,493 | INFO     | all data control threads have been joined
[2026-01-09 17:02:21] 2026-01-09 22:01:50,704 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:50,759 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:50,875 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:50,913 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:50,989 | INFO     | [job] control thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:51,039 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:51,387 | INFO     | [payload] control thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:51,443 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:51,443 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:51,498 | INFO     | [data] control thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:51,522 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:52,044 | INFO     | [job] validate thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:52,138 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:52,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:02:21] 2026-01-09 22:01:53,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:02:21] 2026-01-09 22:01:53,570 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:57,039 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:01:59,861 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:02:21] 2026-01-09 22:02:00,866 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:02:21] 2026-01-09 22:02:02,054 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:02:21] 2026-01-09 22:02:02,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267928868672)>', '<ExcThread(monitor, started 140267483014912)>']
[2026-01-09 17:02:21] 2026-01-09 22:02:07,332 | INFO     | all workflow threads have been joined
[2026-01-09 17:02:21] 2026-01-09 22:02:07,332 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:02:21] 2026-01-09 22:02:07,332 | INFO     | traces error code: 0
[2026-01-09 17:02:21] 2026-01-09 22:02:07,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:02:21] 2026-01-09 22:02:20,880 | INFO     | PID=19326 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 17:02:21] 2026-01-09 22:02:20,881 | INFO     | .. there are 3 such processes running
[2026-01-09 17:02:21] 2026-01-09 22:02:20,881 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:02:21] 2026-01-09 22:02:20,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:02:21] 2026-01-09 22:02:20,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:02:21] 2026-01-09 22:02:20,882 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:02:21] 2026-01-09 22:02:20,882 | INFO     | [monitor] control thread has ended
[2026-01-09 17:02:21] 2026-01-09 22:02:20,987 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:02:21] 2026-01-09 22:02:20,990 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:02:21] 2026-01-09 22:02:20,992 [wrapper] pilotpid: 19326
[2026-01-09 17:02:21] 2026-01-09 22:02:20,994 [wrapper] Pilot exit status: 0
[2026-01-09 17:02:21] 2026-01-09 22:02:21,004 [wrapper] pandaids: 6962017160
[2026-01-09 17:02:21] 2026-01-09 22:02:21,035 [wrapper] cleanup supervisor_pilot  4024 19327
[2026-01-09 17:02:21] 2026-01-09 22:02:21,038 [wrapper] Test setup, not cleaning
[2026-01-09 17:02:21] 2026-01-09 22:02:21,041 [wrapper] apfmon messages muted
[2026-01-09 17:02:21] 2026-01-09 22:02:21,044 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:02:21] 2026-01-09 22:02:21,046 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:02:21]  *** Error codes and diagnostics ***
[2026-01-09 17:02:21]     "exeErrorCode": 0,
[2026-01-09 17:02:21]     "exeErrorDiag": "",
[2026-01-09 17:02:21]     "pilotErrorCode": 0,
[2026-01-09 17:02:21]     "pilotErrorDiag": "",
[2026-01-09 17:02:21]  *** Listing of results directory ***
[2026-01-09 17:02:21] total 442756
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-09 17:02:21] -rwx------ 1 boincer umatlas     36322 Jan  7 10:34 runpilot2-wrapper.sh
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 10:38 queuedata.json
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas       100 Jan  9 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:02:21] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 13:00 run_atlas
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas       105 Jan  9 13:00 job.xml
[2026-01-09 17:02:21] -rw-r--r-- 2 boincer umatlas 226463890 Jan  9 13:00 EVNT.47898824._000496.pool.root.1
[2026-01-09 17:02:21] -rw-r--r-- 2 boincer umatlas    592391 Jan  9 13:00 input.tar.gz
[2026-01-09 17:02:21] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 13:00 start_atlas.sh
[2026-01-09 17:02:21] drwxrwx--x 2 boincer umatlas      4096 Jan  9 13:00 shared
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas         0 Jan  9 13:00 boinc_lockfile
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas      2516 Jan  9 13:00 pandaJob.out
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas        57 Jan  9 13:00 setup.sh.local
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas    989356 Jan  9 13:00 agis_schedconf.cvmfs.json
[2026-01-09 17:02:21] drwx------ 5 boincer umatlas      4096 Jan  9 13:00 pilot3
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 16:58 init_data.xml
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas 218006493 Jan  9 17:01 HITS.47898826._009823.pool.root.1
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas        95 Jan  9 17:01 pilot_heartbeat.json
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas       531 Jan  9 17:01 boinc_task_state.xml
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas      1055 Jan  9 17:01 memory_monitor_summary.json
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas   1516240 Jan  9 17:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas    475296 Jan  9 17:01 log.47898826._009823.job.log.tgz.1
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas      7859 Jan  9 17:01 heartbeat.json
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 17:02 boinc_mmap_file
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas        29 Jan  9 17:02 wrapper_checkpoint.txt
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas       820 Jan  9 17:02 pilotlog.txt
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas   2021008 Jan  9 17:02 log.47898826._009823.job.log.1
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas       357 Jan  9 17:02 output.list
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas       620 Jan  9 17:02 runtime_log
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas   2519040 Jan  9 17:02 result.tar.gz
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas       663 Jan  9 17:02 X5WLDmtjkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHMiKDmljmkSn.diag
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 17:02 runtime_log.err
[2026-01-09 17:02:21] -rw-r--r-- 1 boincer umatlas     21320 Jan  9 17:02 stderr.txt
[2026-01-09 17:02:21] HITS file was successfully produced:
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas 218006493 Jan  9 17:01 shared/HITS.pool.root.1
[2026-01-09 17:02:21]  *** Contents of shared directory: ***
[2026-01-09 17:02:21] total 437120
[2026-01-09 17:02:21] -rw-r--r-- 2 boincer umatlas 226463890 Jan  9 13:00 ATLAS.root_0
[2026-01-09 17:02:21] -rw-r--r-- 2 boincer umatlas    592391 Jan  9 13:00 input.tar.gz
[2026-01-09 17:02:21] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 13:00 start_atlas.sh
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas 218006493 Jan  9 17:01 HITS.pool.root.1
[2026-01-09 17:02:21] -rw------- 1 boincer umatlas   2519040 Jan  9 17:02 result.tar.gz
17:02:23 (15635): run_atlas exited; CPU time 110234.573294
17:02:23 (15635): called boinc_finish(0)

</stderr_txt>
]]>

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