Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:23:10 (981709): wrapper (7.7.26015): starting
10:23:10 (981709): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 10:23:10] Arguments: --nthreads 12
[2026-01-09 10:23:10] Threads: 12
[2026-01-09 10:23:10] Checking for CVMFS
[2026-01-09 10:23:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:23:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:23:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:23:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:23:10] 2.11.5.0 3377194 91814 192684 154952 1 240 37587409 45568001 15262 130560 0 715311183 99.783 466299157 14441 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-09 10:23:10] CVMFS is ok
[2026-01-09 10:23:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:23:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:23:10] Further information can be found at the LHC@home message board.
[2026-01-09 10:23:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:23:10] Checking for apptainer binary...
[2026-01-09 10:23:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:23:10] Running /usr/bin/apptainer --version
[2026-01-09 10:23:10] apptainer version 1.4.1-1.el9
[2026-01-09 10:23:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:23:10] wns0027.triumf.lcg
[2026-01-09 10:23:10] apptainer works
[2026-01-09 10:23:10] Set ATHENA_PROC_NUMBER=12
[2026-01-09 10:23:10] Set ATHENA_CORE_NUMBER=12
[2026-01-09 10:23:10] Starting ATLAS job with PandaID=6962016966
[2026-01-09 10:23:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:26:28]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | WARNING  | found no stored workdir sizes
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | WARNING  | wrong length of table data, x=[1767983021.0], y=[2510.0] (must be same and length>=4)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | could have reported an average CPU frequency of 2802 MHz (4 samples)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | ..............................
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . Timing measurements:
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . get job = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . initial setup = 2 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . payload setup = 4 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . stage-in = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . payload execution = 13 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . stage-out = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . log creation = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | ..............................
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962016966/pilotlog.txt
[2026-01-09 10:26:28] 2026-01-09 18:25:56,769 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 10:26:28] - Log from pilotlog.txt -
[2026-01-09 10:26:28] 2026-01-09 18:25:56,758 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:26:28] 2026-01-09 18:25:56,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | WARNING  | found no stored workdir sizes
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | WARNING  | wrong length of table data, x=[1767983021.0], y=[2510.0] (must be same and length>=4)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | could have reported an average CPU frequency of 2802 MHz (4 samples)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | ..............................
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . Timing measurements:
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . get job = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . initial setup = 2 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . payload setup = 4 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . stage-in = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . payload execution = 13 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . stage-out = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . log creation = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | ..............................
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962016966/pilotlog.txt
[2026-01-09 10:26:28] 2026-01-09 18:25:56,770 | WARNING  | 
[2026-01-09 10:26:28] [begin log extracts]
[2026-01-09 10:26:28] - Log from pilotlog.txt -
[2026-01-09 10:26:28] 2026-01-09 18:25:56,758 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:26:28] 2026-01-09 18:25:56,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | WARNING  | found no stored workdir sizes
[2026-01-09 10:26:28] 2026-01-09 18:25:56,759 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | WARNING  | wrong length of table data, x=[1767983021.0], y=[2510.0] (must be same and length>=4)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | could have reported an average CPU frequency of 2802 MHz (4 samples)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | ..............................
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . Timing measurements:
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . get job = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . initial setup = 2 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . payload setup = 4 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . stage-in = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . payload execution = 13 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . stage-out = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | . log creation = 0 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | ..............................
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 10:26:28] 2026-01-09 18:25:56,760 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962016966/pilotlog.txt
[2026-01-09 10:26:28] [end log extracts]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,770 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,771 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | 
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | job summary report
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | --------------------------------------------------
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | PanDA job id: 6962016966
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | task id: 47898826
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 10:23:47,808 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | pilot state: failed 
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | transexitcode: 65
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | exeerrorcode: 65
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | exitcode: 65
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | cpuconsumptiontime: 16 s
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | nevents: 0
[2026-01-09 10:26:28] 2026-01-09 18:25:56,943 | INFO     | neventsw: 0
[2026-01-09 10:26:28] 2026-01-09 18:25:56,944 | INFO     | pid: 991892
[2026-01-09 10:26:28] 2026-01-09 18:25:56,944 | INFO     | pgrp: 991892
[2026-01-09 10:26:28] 2026-01-09 18:25:56,944 | INFO     | corecount: 12
[2026-01-09 10:26:28] 2026-01-09 18:25:56,944 | INFO     | event service: False
[2026-01-09 10:26:28] 2026-01-09 18:25:56,944 | INFO     | sizes: {0: 2283961, 4: 2284223, 11: 2284251, 21: 2307384, 22: 2311676, 24: 2311704, 144: 2311998}
[2026-01-09 10:26:28] 2026-01-09 18:25:56,944 | INFO     | --------------------------------------------------
[2026-01-09 10:26:28] 2026-01-09 18:25:56,944 | INFO     | 
[2026-01-09 10:26:28] 2026-01-09 18:25:56,944 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 10:26:28] 2026-01-09 18:25:56,957 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,958 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,959 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,959 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:26:28] 2026-01-09 18:25:56,959 | INFO     | job 6962016966 has completed (purged errors)
[2026-01-09 10:26:28] 2026-01-09 18:25:56,959 | INFO     | overall cleanup function is called
[2026-01-09 10:26:28] 2026-01-09 18:25:57,965 | INFO     | --- collectZombieJob: --- 10, [991892]
[2026-01-09 10:26:28] 2026-01-09 18:25:57,965 | INFO     | zombie collector waiting for pid 991892
[2026-01-09 10:26:28] 2026-01-09 18:25:57,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:26:28] 2026-01-09 18:25:57,965 | INFO     | collected zombie processes
[2026-01-09 10:26:28] 2026-01-09 18:25:57,965 | INFO     | will attempt to kill all subprocesses of pid=991892
[2026-01-09 10:26:28] 2026-01-09 18:25:58,116 | INFO     | process IDs to be killed: [991892] (in reverse order)
[2026-01-09 10:26:28] 2026-01-09 18:25:58,178 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:26:28] 2026-01-09 18:25:58,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:26:28] 2026-01-09 18:25:58,185 | INFO     | did not find any defunct processes belonging to 991892
[2026-01-09 10:26:28] 2026-01-09 18:25:58,192 | INFO     | did not find any defunct processes belonging to 991892
[2026-01-09 10:26:28] 2026-01-09 18:25:58,192 | INFO     | ready for new job
[2026-01-09 10:26:28] 2026-01-09 18:25:58,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:26:28] 2026-01-09 18:25:58,194 | INFO     | ***************************************
[2026-01-09 10:26:28] 2026-01-09 18:25:58,194 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:26:28] 2026-01-09 18:25:58,195 | INFO     | ***************************************
[2026-01-09 10:26:28] 2026-01-09 18:25:58,195 | INFO     | 
[2026-01-09 10:26:28] 2026-01-09 18:25:58,196 | INFO     | architecture information:
[2026-01-09 10:26:28] 2026-01-09 18:25:58,197 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:26:28] 2026-01-09 18:25:58,209 | INFO     | cat /etc/os-release:
[2026-01-09 10:26:28] NAME="CentOS Linux"
[2026-01-09 10:26:28] VERSION="7 (Core)"
[2026-01-09 10:26:28] ID="centos"
[2026-01-09 10:26:28] ID_LIKE="rhel fedora"
[2026-01-09 10:26:28] VERSION_ID="7"
[2026-01-09 10:26:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:26:28] ANSI_COLOR="0;31"
[2026-01-09 10:26:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:26:28] HOME_URL="https://www.centos.org/"
[2026-01-09 10:26:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:26:28] 
[2026-01-09 10:26:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:26:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:26:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:26:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:26:28] 
[2026-01-09 10:26:28] 2026-01-09 18:25:58,209 | INFO     | ***************************************
[2026-01-09 10:26:28] 2026-01-09 18:25:58,712 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 10:26:28] 2026-01-09 18:25:58,723 | INFO     | sufficient remaining disk space (1999411085312 B)
[2026-01-09 10:26:28] 2026-01-09 18:25:58,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:26:28] 2026-01-09 18:25:58,724 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:26:28] 2026-01-09 18:25:58,724 | INFO     | update_server=False
[2026-01-09 10:26:28] 2026-01-09 18:25:58,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:26:28] 2026-01-09 18:25:58,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:26:28] 2026-01-09 18:25:58,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:26:28] 2026-01-09 18:25:58,827 | INFO     | all data control threads have been joined
[2026-01-09 10:26:28] 2026-01-09 18:25:59,064 | INFO     | all job control threads have been joined
[2026-01-09 10:26:28] 2026-01-09 18:25:59,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:26:28] 2026-01-09 18:25:59,541 | INFO     | aborting loop
[2026-01-09 10:26:28] 2026-01-09 18:25:59,729 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:25:59,730 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:25:59,736 | INFO     | all payload control threads have been joined
[2026-01-09 10:26:28] 2026-01-09 18:25:59,832 | INFO     | [data] control thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:25:59,858 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:25:59,926 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:00,065 | INFO     | [job] control thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:00,088 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:00,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:26:28] 2026-01-09 18:26:00,299 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:00,454 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:00,547 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:00,728 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:00,742 | INFO     | [payload] control thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:01,009 | INFO     | [job] validate thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:01,134 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:01,227 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:04,228 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:26:28] 2026-01-09 18:26:18,811 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:26:28] 2026-01-09 18:26:20,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713354258240)>', '<ExcThread(monitor, started 139712954078976)>']
[2026-01-09 10:26:28] 2026-01-09 18:26:25,582 | INFO     | all workflow threads have been joined
[2026-01-09 10:26:28] 2026-01-09 18:26:25,582 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:26:28] 2026-01-09 18:26:25,582 | INFO     | traces error code: 0
[2026-01-09 10:26:28] 2026-01-09 18:26:25,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:26:28] 2026-01-09 18:26:28,532 | INFO     | PID=985351 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 10:26:28] 2026-01-09 18:26:28,532 | INFO     | .. there are 21 such processes running
[2026-01-09 10:26:28] 2026-01-09 18:26:28,533 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:26:28] 2026-01-09 18:26:28,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:26:28] 2026-01-09 18:26:28,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:26:28] 2026-01-09 18:26:28,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:26:28] 2026-01-09 18:26:28,533 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 10:26:28] 2026-01-09 18:26:28,533 | INFO     | [monitor] control thread has ended
[2026-01-09 10:26:28] 2026-01-09 18:26:28,651 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:26:28] 2026-01-09 18:26:28,653 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:26:28] 2026-01-09 18:26:28,654 [wrapper] pilotpid: 985351
[2026-01-09 10:26:28] 2026-01-09 18:26:28,656 [wrapper] Pilot exit status: 0
[2026-01-09 10:26:28] 2026-01-09 18:26:28,662 [wrapper] pandaids: 6962016966
[2026-01-09 10:26:28] 2026-01-09 18:26:28,699 [wrapper] cleanup supervisor_pilot  985357 985352
[2026-01-09 10:26:28] 2026-01-09 18:26:28,700 [wrapper] Test setup, not cleaning
[2026-01-09 10:26:28] 2026-01-09 18:26:28,702 [wrapper] apfmon messages muted
[2026-01-09 10:26:28] 2026-01-09 18:26:28,704 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:26:28] 2026-01-09 18:26:28,705 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:26:28]  *** Error codes and diagnostics ***
[2026-01-09 10:26:28]     "exeErrorCode": 65,
[2026-01-09 10:26:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 10:26:28]     "pilotErrorCode": 1305,
[2026-01-09 10:26:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 10:26:28]  *** Listing of results directory ***
[2026-01-09 10:26:28] total 224924
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc    579449 Jan  7 07:25 pilot3.tar.gz
[2026-01-09 10:26:28] -rwx------. 1 boinc boinc     36322 Jan  7 07:33 runpilot2-wrapper.sh
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc      5112 Jan  7 07:36 queuedata.json
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc       100 Jan  9 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:26:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 10:23 run_atlas
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc       105 Jan  9 10:23 job.xml
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc      6594 Jan  9 10:23 init_data.xml
[2026-01-09 10:26:28] -rw-r--r--. 2 boinc boinc 226207883 Jan  9 10:23 EVNT.47898824._000489.pool.root.1
[2026-01-09 10:26:28] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:23 start_atlas.sh
[2026-01-09 10:26:28] drwxrwx--x. 2 boinc boinc      4096 Jan  9 10:23 shared
[2026-01-09 10:26:28] -rw-r--r--. 2 boinc boinc    592390 Jan  9 10:23 input.tar.gz
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc         0 Jan  9 10:23 boinc_lockfile
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc      2516 Jan  9 10:23 pandaJob.out
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc    989372 Jan  9 10:23 agis_schedconf.cvmfs.json
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc   1516240 Jan  9 10:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:26:28] drwx------. 5 boinc boinc      4096 Jan  9 10:23 pilot3
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc       946 Jan  9 10:23 memory_monitor_summary.json
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc       521 Jan  9 10:23 boinc_task_state.xml
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc     20747 Jan  9 10:23 log.47898826._009648.job.log.tgz.1
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc      8385 Jan  9 10:25 heartbeat.json
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc      8192 Jan  9 10:26 boinc_mmap_file
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc        22 Jan  9 10:26 wrapper_checkpoint.txt
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc       892 Jan  9 10:26 pilotlog.txt
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc        95 Jan  9 10:26 pilot_heartbeat.json
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc     81512 Jan  9 10:26 log.47898826._009648.job.log.1
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc       188 Jan  9 10:26 output.list
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc       620 Jan  9 10:26 runtime_log
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc    122880 Jan  9 10:26 result.tar.gz
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc      8636 Jan  9 10:26 runtime_log.err
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc       645 Jan  9 10:26 548NDmbikx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYLiKDm9FB1Yn.diag
[2026-01-09 10:26:28] -rw-r--r--. 1 boinc boinc     21617 Jan  9 10:26 stderr.txt
[2026-01-09 10:26:28] No HITS result produced
[2026-01-09 10:26:28]  *** Contents of shared directory: ***
[2026-01-09 10:26:28] total 221628
[2026-01-09 10:26:28] -rw-r--r--. 2 boinc boinc 226207883 Jan  9 10:23 ATLAS.root_0
[2026-01-09 10:26:28] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:23 start_atlas.sh
[2026-01-09 10:26:28] -rw-r--r--. 2 boinc boinc    592390 Jan  9 10:23 input.tar.gz
[2026-01-09 10:26:28] -rw-------. 1 boinc boinc    122880 Jan  9 10:26 result.tar.gz
10:26:30 (981709): run_atlas exited; CPU time 20.135193
10:26:30 (981709): called boinc_finish(0)

</stderr_txt>
]]>

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